Oncorhynchus keta (chum salmon): 118388854
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Entry
118388854 CDS
T09424
Symbol
usp48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oke01002
]
118388854 (usp48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118388854 (usp48)
Enzymes [BR:
oke01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118388854 (usp48)
Peptidases and inhibitors [BR:
oke01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118388854 (usp48)
Ubiquitin system [BR:
oke04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118388854 (usp48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Usp-48
Motif
Other DBs
NCBI-GeneID:
118388854
NCBI-ProteinID:
XP_035634275
LinkDB
All DBs
Position
10:46285745..46310089
Genome browser
AA seq
1055 aa
AA seq
DB search
MILVMAPRVQLEKAAWRWVESVRPEDIQREHIEIAYRICVPACKRGACRRNCKGNPNCLV
GIGEHAWLGEIDENTFHNIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWFHNLELRRT
LYLCQNARAEEHNMDSDYEPRSICEHLQYLFALLQNSNRRYIDPSGLVKALGLDTGQQQD
AQEFSKLFLSLLEDTLSKQKNPNLHNVIQQQFCGQMSYVTVCNQCGRASPLPSRFYELEL
NIQGHKNLTECVTEFLKEEKLDGDNRYFCESCQSKQNAARRIKLHSLPRVLNLQLMRFVF
DRQTGHKKKLNTFISFPEQLDMGPFLEEKEDEKCVYELSAVLIHRGVSAYSGHYIAHVRD
ARTSDWYKFNDEEIEKMEGKKLQLGIEEDIAETVKSQTRKPKCSKGYHCSRNAYMLVYKC
QREEDTDPMETNIEVPGFLGRLVDRDNRKFEEWCLEMADMRKQSVDKGKAKHEEVKELYE
LLPAEDGQEYEFVPLEWLKKWLDDSTVTKEIDNGNFLCSHGKLHPDKVGEAKRISVKAAE
LLFDKYGGGPRLDGSTLCEECVGQRCRVLRLKNQLAEDYKEVTNLVKCPPKSDEGYWAGK
TSLRSWRQLALEQLEEDEEETKHSNGKTNGEGPEITATKEYGPENLDGDEEEMKTFNEDI
LCRHGGLSILESERRLVTEEVWSKLRVYFPKAPQFTQLQEPCQQCLRLEREGKENEALNR
MMASEQKSSLLNLFQEKNRPTLTKWPQETDILYIVPLFFVDEWRRFIRRPTKTTPVSSVG
NSLLLCPHRGFMFTFDSMLKGDAQHIALLWPDEWEVISRHFLVDQPISICRISGATPNGS
SVEYTTQPELCRDCREGFIFQQQRDMREYAQATVYVRKVIDDKRLKDAAPEMNVSGSEAE
DEREEPVAKVDGERDPDFSQSEDGAKRQKLSDGTVSAAASPTPLASGGKSGIRRSTRHRK
LRGEKALIVSANQTLKELKIQIMHAFSVAPFDQNLSIDGRCLTDDSATLGSLGVIPESVI
CLKADEPIADFAAMDDVYQVCMPEEGFKGTGLLGH
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgattctagtaatggcgcctcgcgtacagcttgagaaagcagcctggcgctgggtcgag
tcggtgagaccagaggacatacaacgggaacatattgagatagcttaccgaatctgtgta
ccggcgtgcaagaggggagcatgcaggaggaattgcaaggggaacccaaattgtcttgtc
ggtattggggaacatgcctggttgggagagattgacgagaacaccttccacaacattgac
gatcctaactcggagcgccgggacaagaacacgtttgtgggtctgacaaacctgggcgcc
acatgttacgtcaacacctttctgcaggtgtggttccacaacctggagctgcgtaggacc
ctgtacctgtgtcagaacgccagggcagaggagcacaacatggactcagactacgagcct
cgcagcatatgtgaacacctgcagtacctgtttgcactgctacagaacagcaacagaagg
tacatagacccctcagggctggtcaaggctctggggctggacacaggacaacagcaggac
gctcaagagttttccaagctcttcctctcgctattggaggataccttatccaaacagaag
aacccaaacctgcataatgtcatccagcagcagttctgtggccagatgtcttacgtcact
gtgtgtaaccagtgtggtcgtgcttctcctctgccgtcccgattctacgaactggagctc
aacatccagggccacaagaaccttacagaatgtgttacagagttcctcaaggaggagaag
ttggatggtgacaaccgctacttctgtgaaagctgccagagcaaacagaacgccgctcga
cgcatcaaactgcacagcctcccacgggtactcaacctgcagctcatgcgtttcgttttc
gacagacaaactggtcacaagaagaagctcaacaccttcatcagtttcccagagcagctg
gacatgggcccgtttctggaggaaaaagaagatgagaagtgtgtgtacgagctgagtgcg
gtcctgatccaccgcggggtcagcgcctactcgggtcactacatcgcccatgtgcgagac
gcccgcaccagcgactggtacaagttcaacgacgaggagattgagaagatggaaggcaaa
aagctacagctgggcatcgaggaggacatcgccgagacggtgaagtcccagacccgtaag
cccaagtgcagtaaaggatatcactgctccagaaatgcctacatgctggtgtacaaatgc
cagagagaggaggacacagaccccatggagacaaacattgaggtgccaggctttctgggg
aggctggtggaccgagacaacaggaagtttgaagagtggtgcctggaaatggccgacatg
cgcaagcagagcgtcgacaagggcaaggccaagcacgaagaggtgaaggaactctacgag
cttttacctgcggaagatggccaagagtatgagtttgtgcctctggagtggctgaagaaa
tggctggatgactcgacggtcaccaaagaaatcgacaacggcaacttcctgtgttctcac
ggtaaacttcacccagacaaggtgggggaggccaagaggatctccgtcaaagctgcagag
cttctcttcgacaaatatggaggaggacccaggctagatggctcaactctctgtgaggaa
tgtgtgggacagagatgcagggtgctgcggctaaagaaccagctggccgaggattacaaa
gaagtcaccaaccttgtcaagtgcccgcccaaaagtgatgaggggtactgggcgggcaag
acgtctctgcggagctggagacagttggccttggagcagctggaggaggatgaggaggag
accaaacacagcaacggcaaaaccaacggagagggaccagagatcactgctactaaagag
tacggcccggagaacctggacggagacgaggaggaaatgaagaccttcaacgaggacatc
ctctgtcggcatggcggtctgagtatcctggagagcgagcggcggctggtgactgaggag
gtgtggtccaaactgagggtgtacttccccaaagccccccagttcacccagctacaggag
ccctgtcagcagtgcttgaggctggagcgagaggggaaggagaatgaggctctgaacagg
atgatggcgtcggaacagaagagctccttactcaacctcttccaggagaagaacaggccc
acactcaccaagtggccacaggagacagatattctctacatagttcctctgttctttgta
gacgagtggagaaggttcatcaggaggcccactaagaccaccccagtgtcaagcgtaggg
aacagtttgctcctatgtccacatagaggcttcatgttcaccttcgactccatgttaaag
ggagacgcccaacatatagctcttctctggcccgacgaatgggaggtgatcagcagacac
ttcctggttgatcagccaatctccatctgccggatcagcggggccacacccaacggctcc
agtgtggagtacaccacccagcctgagttgtgtagggactgcagagaaggcttcattttc
cagcagcagagggacatgagagagtatgcacaagccacagtctacgtacgcaaggtcata
gacgacaagaggttgaaggatgcagctcctgagatgaatgtgagcgggtcggaggcagag
gatgagagggaggagcctgttgctaaggtggatggagagcgagaccctgatttcagccag
tcagaggacggggcaaagcgtcagaagctgagtgacggcaccgtcagtgctgccgcaagt
cccacccccctggccagtggtggcaaatcggggatcaggaggagcacgaggcacaggaag
ctccggggagagaaagcactcatcgtctcagccaatcagacgctcaaggagttgaaaata
cagatcatgcacgccttctccgtggccccgtttgatcagaacctgtcgatcgacggccgg
tgtcttacggacgattctgccaccctcggcagcctaggagtcatcccagagagcgtcatc
tgtctgaaggctgatgaacccatagcagattttgcagcaatggatgatgtttatcaggtg
tgtatgcctgaagaaggattcaaagggactgggcttcttggccactga
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integrated database retrieval system
