Oncorhynchus keta (chum salmon): 118388902
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Entry
118388902 CDS
T09424
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04110
Cell cycle
oke04218
Cellular senescence
oke04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118388902 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118388902 (rbl1)
04218 Cellular senescence
118388902 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118388902 (rbl1)
Transcription factors [BR:
oke03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
118388902 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
118388902
NCBI-ProteinID:
XP_035634378
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All DBs
Position
10:48619150..48666566
Genome browser
AA seq
1056 aa
AA seq
DB search
MRGDESDSDSGRTDESSVRKSLEMLCQELNMDEQTASEAMQNFKSIWNTYTLEGEVVHWL
ACSLYAACRKGSTPTVGKGVMEGNCVSLTRILRTSKLSLIQFFNKMKKWSDMSNLSQEFR
NRMGRLERTFEVSTVIFRKFEPIFMDMFQDPQGEPPRQPRSRKHRRLPCHVSDVFKFCWT
LFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCSNRKDLVNPLFKGMPSIFRLENN
TPDEPPCVIDRLCELHDGLVVEAKGIKEHYFKPYIKRLFERQILKGNEELLTDLLDTPNF
IDNNKAINREYEEYVLTVGDFDERVFLGADADEEIGTPRKAAPEPRACQLSARMQVESNL
QQHFEKKRTLAPSTPLTGRRYLKEKELLVTPVSSATQSVSRLQSMVSGLRSAPSEALMQI
FKSCSRDPIIAILSRVKTLGETFKQHYTKDSEELPGSHMDFAENRMKLAEILYYKILENV
MAQETRRLHGKDMAVLLEQDIFHCSLMACCLEVVLFAYSSQRTFPWIISIFKLRPFYFFK
VIEVFIRSEEGLSRDMVKHLNSIEEQVLECRAWTADSVLWEALEQAHNKVPTVEEVNFPS
SFDTGNSNAGPSHLPLVALSPIIHPRIREFRTGLSSARKDIPPSPLSVHDRYSSPAAGSA
KRRLFGDDSSSQAQQSPSLAKRIMFTPGGTLKIDTPTILNMTTANGQQLSIPLQGIKNDL
GGITLIQVQTRGEPGSPITAQVLLTASPSRPIPAPQAQPDPQQSRPRRTGSLALFFRKVY
HLASVRLRDLCVRLDISAELRGKIWTCFEHSIVQCPELMKDRHLDQLLLCAIYIISKITK
EGHTFQDIMKCYRSQPQASSHVYRSVLIRPSSTREQLSDENMEVDPSGGTSLISAAEKAD
QSSREEALAQGEERGDLIQFYNSVYVLKIKGFALRYAAPSMDNRMEAPPLSPFPSMRAQP
LSPRRISQRHSIYVSPHKNGSCLTPNSAYTYKINGSPSKELTDINRMIRQGGVSRKRAFS
MEGDYLGESPTKRVCPESEDVLLKRLQDVVSERAHH
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgcggggagacgagtcagattccgactccgggcggacggacgagagctccgtccgaaag
agcttggaaatgctttgtcaggagctgaatatggacgaacagacggcatctgaagccatg
caaaacttcaagtcgatttggaatacatacacactggagggggaagtagttcattggcta
gcctgctctctctatgcagcctgcagaaagggctccacacccactgtgggtaagggggtg
atggaaggcaactgtgtgtccctgactcgaatactcaggacgtcaaaactgagtttgatt
cagttcttcaacaagatgaagaaatggtcggatatgtccaacttatctcaggaatttcgg
aatcgcatgggccgcctggagagaacctttgaagtgtcaactgtgatctttcggaagttt
gagcccatattcatggacatgttccaggatcctcaaggggagcccccacgacagcctcga
agcagaaaacacaggcgcctgccctgtcacgtcagcgatgtattcaaattctgctggacc
ctgtttgtgtacactaaaggaaatttccgtatgattggcgatgacttggtgaactcatac
cacctcctgctctgctgcttggacttggtgtttggaaatgccctgctatgctccaacagg
aaagaccttgtcaacccacttttcaaaggcatgcccagcatcttcaggttggaaaacaac
accccggacgagccgccatgtgtcatcgatcggctgtgtgagctacacgatggcttggtg
gtggaggccaagggcatcaaggagcactacttcaagccctacattaaaaggctctttgag
cggcagatacttaaagggaatgaggagctgctcactgatcttctggacacaccaaatttc
atagataacaataaagcgataaaccgggagtatgaggagtatgtgctgactgtgggggac
tttgacgagagggtgttcctgggggcggatgccgatgaggagatcgggacacccaggaag
gctgcaccagaaccccgggcctgccagctgtcagcccgcatgcaggtggagagcaacctg
caacagcactttgagaagaagcgcaccctggccccctccactcctctgacaggcaggcgt
tacctgaaggagaaggagctactggtgacccctgtgtcctcggccacgcaaagcgtcagc
cgactccagagcatggtctcgggcctgcgtagcgcccccagcgaggccctgatgcagata
ttcaagtcatgttcgcgggaccccatcatagccattctgagcagagtgaaaaccctgggc
gagacgttcaagcaacattacacaaaggactcagaggagcttcctggatcacacatggat
tttgctgagaacaggatgaagctggctgaaatcctctattacaagatccttgagaatgtc
atggcccaagagacaaggaggctacacggcaaagacatggctgtgctgctggagcaggac
atcttccactgctctctgatggcctgctgtctggaggtggtgctgtttgcctacagctcc
cagcgcaccttcccctggatcatcagcatcttcaaactacgaccgttctacttcttcaag
gtgattgaggtgttcatccgctcagaagagggtctgtcccgggacatggtgaagcacctg
aactccatcgaagagcaggtgctggagtgccgggcctggacagcagactctgtgctgtgg
gaggccctggagcaggctcacaacaaggtccccaccgtggaggaggttaacttccccagt
agttttgacacggggaacagcaatgctggtccctcccacctccctctggtggccctctcc
cccatcatccaccctcgcatccgcgagtttaggacgggcctgagcagcgcacgcaaagac
attcctccgtcgcccttatccgtccacgaccgttacagctccccggcggcgggcagtgcc
aagcggcgtctgtttggggacgacagcagcagccaggcccagcagtctccgtcccttgcc
aagaggattatgttcacacccggcgggacgctgaagattgacactcccaccatactcaat
atgaccacagccaacggccagcagctcagcatcccactgcaaggtataaagaatgatctg
ggaggcatcacgctgatccaggtacagaccagaggggagcccggcagtcccattacagcc
caggtcctcttgacagcctcccccagccggcccatcccggcaccccaggcccagccagac
ccccaacagagccggcccagacgcaccggctccttggccctcttcttcaggaaggtgtac
cacctggccagtgtgcggctgagagatctgtgcgttaggctggacatctcggcagagctg
cggggcaagatctggacttgctttgagcactccatcgtccagtgtccggagctgatgaaa
gacagacacctggaccagctcctcctttgcgccatctacataatctctaagattacgaaa
gaaggccacacattccaggacatcatgaaatgttaccgcagtcaaccacaagccagcagt
catgtctaccgcagtgtcctcatccgacccagcagcaccagagaacagctctcagacgag
aacatggaagtggacccctctggtggaacatccttaatttcagctgctgagaaagccgac
cagagcagcagagaggaggctcttgcccaaggcgaggagcgcggcgacctcatccagttc
tacaactctgtctatgtgctgaagattaagggctttgccctccgatacgccgcccccagc
atggacaacaggatggaggcccctcctctgtccccgttcccctcgatgagagcccagccc
ctgtccccccgccgcatctcccagagacactcgatctacgtgtccccacacaagaatggc
tcctgtctcacccccaactctgcctacacctacaagatcaacggcagcccctccaaagaa
ctgactgacatcaaccggatgatccgccagggcggggtcagcaggaaaagggccttttcc
atggagggcgactacttgggcgagtcccccaccaaacgggtgtgtcccgagagcgaggat
gtgctgctcaaacggctgcaggacgtggtcagcgagagagcccaccactga
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