Oncorhynchus keta (chum salmon): 118388996
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Entry
118388996 CDS
T09424
Name
(RefSeq) homeobox protein TGIF2-like isoform X1
KO
K19553
homeobox protein TGIF2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118388996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118388996
Transcription factors [BR:
oke03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
118388996
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
118388996
NCBI-ProteinID:
XP_035634539
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All DBs
Position
10:55999787..56008548
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AA seq
354 aa
AA seq
DB search
MSHERRIEPTSGKIKACNTLERKYRVKLWSGAHFFYFFFYKGTSTAACFQTSHQQRMKSF
KRVLEEERMREQELSAMSDSDPFEDDRSILDLSGGGGGSGKRRRRGNLPKEAVQVLRSWL
YEHRFNAYPSEQEKLSLSDQTSLSVLQICNWFINARRRLLPDLLRKDGKDPTQFTISRRA
GKGEGRPATGGFGSAPESPTSVHSPALPPLRPSVIRPAPTLDLSLLGNTATAILLGAGYP
SQEGYCVQALMQLDMQSLLRREAEENGSKVISASPTGGLFNTPPPTPPELCPCQDFSDLR
LLVDAALQRAAEHESQRLLPEYQSRATAEATGGCSHGSSVPSFSSNPCPSLFCT
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacgaacgaagaattgaacccacgagcggcaaaataaaagcgtgcaacaccttg
gaaagaaaatatcgcgtcaagctttggtcgggggcacacttcttctatttttttttttac
aaaggcacttcgacagctgcgtgttttcaaacaagccatcaacaaagaatgaaatccttc
aaacgagttctggaagaggagcggatgcgagagcaggagctttcagccatgtctgacagt
gacccctttgaggatgaccgctccatccttgacctgtctggagggggtgggggctcgggc
aagcggcgtcgccgtggcaacctgcccaaggaggcggtgcaggtgctgcggagctggctg
tacgagcaccgcttcaacgcctacccctcagagcaggagaaactcagcttgtcagatcag
accagcctttctgtgctacagatatgcaactggttcatcaatgcccgccgccgcctcctc
cccgaccttctccgcaaggatggcaaagaccctacccagttcaccatctccaggcgggcg
ggcaagggcgagggccgcccagccactggaggatttggcagtgcccctgaaagccccacc
tcagtccactctccagccctgccccctctcaggccctctgtcatccgaccagcccccaca
ctggacctcagcctcctgggaaatactgccactgccatccttttgggcgctggctacccc
agccaagagggctactgtgtccaggccctgatgcagctggacatgcagagtctcctgagg
agggaggccgaggagaatggctccaaggttatcagcgccagccccaccggcgggctgttc
aacacgccgccccccacgcctccggagctgtgcccctgccaggatttcagtgacttgagg
ttgctggtggatgcagctctccagagggccgccgagcacgagagtcagaggctgctccca
gagtaccagagcagggccactgcagaagcgacgggtggctgtagccacggcagcagtgtc
cccagtttcagttctaatccatgtcccagtctgttctgcacctaa
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