Oncorhynchus keta (chum salmon): 118389044
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Entry
118389044 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent calcium channel subunit alpha-2/delta-2-like
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04010
MAPK signaling pathway
oke04260
Cardiac muscle contraction
oke04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118389044
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
118389044
04261 Adrenergic signaling in cardiomyocytes
118389044
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118389044
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
118389044
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
dCache_1
VWA
VWA_3
VWA_2
MCP-like_PDC_1
Cache_3-Cache_2
PsbU
Motif
Other DBs
NCBI-GeneID:
118389044
NCBI-ProteinID:
XP_052383311
LinkDB
All DBs
Position
10:complement(58122165..58209557)
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AA seq
1106 aa
AA seq
DB search
MAICTPSCSIVCLVSFQIILIFNVQWPGADGLTFPQQYTIMHWARRIEQEIDRVFQHISG
AQQLKGIYNEKRRQFSLVKNSPYEMVEKVASDIEKLLAKKRKALDRLASEAERVQRDHPW
HDSVKEWNMTYYDSKAELDYQYSLQDGDGETVSPPLQVELVYDPNFKNKVNYSFTAVQIP
TDIYKGAPVILNELNWTQALEKVFMENSQEDPSLLWQAFGSATGVTRYYPATPWRAPDKI
DLYDVRRRPWYIQGASSPKDMIILVDVSGSVSGLTLKLIKSWPGXVSCSLIVVPQYHFCS
VFLSPFLFQFNEKAEAVVPCFKHLVQANVRNKKIFKEAVKLMQAKGTTDYKSGFHFAFNQ
LLNKTNVPRAHCNKIIMLFTDGGEDRAQDIFEQYNWPNKTVRVFTFSVGQHNYDVTPLQW
IACANKGFYFEIRSICAIRINTQEYLDVLGRPMVLAGSRAKQVQWTNVYQDALGLGLVFT
GTMPVFNLTVDGNSQNQLILGVMGVDVHLDEIKKLTPRYNLGANGYIYAIDPNGYLLLHP
NLHPKLLDLPEPVTLDFLDAEVEDSSKQEIRKHMIDGRPGDMQIKTLVKSIDERYIDEGV
RSYTWTPINGTDYSLGLVLPPYSEYYIQADLSDVMLQLQYLQSLLPSSFESGGHVFLAPR
EYCKRLHISDNNTQFLENFLSLMVEITPESEDCDQGLIHNLILDSGIIWQLASRVWKNKD
IQTYGFLALFAATDGGVTRVFPNSAAESWDEDPEPFNSNYYRRSLDNKGYMFRAPPRASM
DDPVTSENGTIGILVSTAVEVNLGGKNLKPAVVGVKLDLEAWVDKFKILASNVSDSRQGS
QKCGPSRSCEMDCEVNTDDLLCYLIDDGGFLVMSNQRDHWKKVGLFFGDVDPYLMHALYN
NSIYARRQSFQYQSACEPVSSSHTGAAPRGIFVPSIADMLSLAWWTSAAAWSVVQQLLYG
LAYNSWLYTGDVLADGFDQKESSCVTIQSQFYFTNTTNSYNVLQDCGNCSRLFHAKRIEN
TNLLFVVAETLPCSSCEIERLTQVKTEFQEEDPCEVLNSARYRRGPTECWDYNIWENTSE
CGRGHSLRSSIGILFSIQLILTLLSL
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggcgatatgcactccgtcttgcagcattgtctgcttggtatctttccagattatcttg
attttcaatgtacagtggcctggcgccgatggtctcacgttcccccagcaatacacaata
atgcactgggccaggcgcatcgagcaggagatcgacagagtcttccagcacatcagcgga
gcccagcagctaaaagggatctacaatgagaaaagaaggcagttcagcctggtaaagaat
tctccttatgagatggtggagaaggtagcttcagacatcgagaagctactggccaagaaa
cgcaaagcacttgataggctggccagtgaagcagaacgtgtccagcgagaccatccctgg
cacgacagcgtcaaggagtggaacatgacatattatgattccaaggcagagctagactat
cagtactccctgcaagatggtgatggggaaacagtgagccctccactacaggtggagttg
gtgtatgaccctaacttcaaaaataaggtcaactactccttcacagccgttcagatcccc
acagacatctacaaaggagccccagtgattctaaatgagctgaactggacccaggcgctg
gagaaggtgtttatggagaacagtcaagaggatccttcactactctggcaggcatttggt
agcgccactggggtcactcgctactacccagccacaccgtggagggcccctgataagatc
gacctttatgatgtgaggagaaggccatggtacatccaaggggcttcatcccccaaagac
atgatcatactcgttgatgtgagtggcagtgtgagcggcctcactttgaagctgatcaag
tcgtggccagggtgagtgtcctgctctctcattgttgttcctcaataccacttctgctct
gtctttctctctcctttcttgtttcagtttaatgaaaaggcagaggcagtggtcccttgc
ttcaaacacctggtccaggccaacgttcgcaacaagaagatcttcaaagaggctgtaaag
ctcatgcaagctaaaggcaccacagactacaagtctggtttccactttgccttcaatcag
ctactaaacaagacgaatgtcccgcgagctcactgcaataaaataatcatgctgttcact
gatggaggagaggatcgagctcaggacatctttgagcagtacaattggcccaacaaaacg
gtgcgggtctttacattctctgtggggcagcacaactatgatgtcacacccttgcaatgg
attgcgtgtgccaataaaggtttctattttgagatccgctccatctgtgccataaggatt
aacacccaggagtacctggatgtgctgggccgccccatggtcctggcaggcagccgtgcc
aagcaggttcagtggaccaatgtctatcaggatgccttgggtctgggacttgtttttact
gggaccatgcctgtttttaatctcaccgtggatggaaactcacagaatcagctcatatta
ggtgtcatgggggtggacgtgcatctggacgaaatcaaaaagctgacgccccgatacaac
cttggagccaatgggtacatatacgccattgacccaaatggataccttctcctgcatccg
aaccttcacccaaagctgctcgacctaccagagcctgtaacacttgacttcctggatgct
gaggtggaggacagttccaaacaggaaatccgcaaacatatgattgatggcagaccgggt
gacatgcagattaagacgcttgtaaaatcaattgatgagcgatacatagatgagggagtt
cggagttacacctggacacccatcaatggtacagactacagtctgggcctggtactgccg
ccctacagtgaatactacatccaggcagacctgagtgatgtgatgctgcagctccagtat
ctgcaatctttgctgcccagctcctttgaatcagggggacacgtgttcctggctcccagg
gaatactgcaagcgtctgcacatctctgacaacaacacacagttcctggagaacttccta
tctctcatggtggagatcacaccagaatctgaagactgtgatcaaggcctcattcacaac
ctgatcttggattctggaatcatctggcagctagcatctagagtgtggaagaacaaggat
atccaaacgtatggtttcctggcattatttgcagccacagatggaggggtaacccgggtc
ttccccaactcggctgctgagtcgtgggatgaggaccctgagcccttcaactctaactac
taccgccgcagccttgacaacaagggctatatgttcagagctccacccagagcctccatg
gatgatccggtgacctcggagaacggcaccatcggaatcctggtcagcactgccgtggaa
gtcaacctgggaggcaagaacctgaaaccggcagtggtgggggtgaagctagacttggaa
gcatgggtagacaagttcaagatcttggccagcaacgtgtctgacagtcgtcaaggctcg
caaaagtgtgggccatccagaagttgtgagatggactgcgaagtcaacactgatgactta
ctctgctatctgattgacgatggtggcttcctggtgatgtccaaccagagggatcactgg
aaaaaggtgggccttttctttggtgatgtggacccctatcttatgcacgcgctgtataac
aactccatctatgcccgccggcagtcttttcagtaccagtcagcatgtgagccagtcagc
agcagccacacaggggcagcacccaggggcatctttgtgccctccatcgcagacatgctc
agtctggcctggtggacatcggcggcagcatggtctgtagtccagcagctgctctatgga
ctggcctacaacagttggctctacacaggtgatgtcctggcagatgggtttgaccagaag
gagagcagctgtgtgaccatccaaagccagttctacttcaccaacaccaccaactcatac
aatgtgctgcaggactgtgggaactgctccaggttatttcatgctaagaggatagagaac
accaacctgctgtttgtggtggctgagacactgccctgtagctcctgtgagattgagaga
ctgacccaggtcaaaacggagttccaggaggaggatccctgtgaggtgttgaactctgca
cgctaccggagaggcccgaccgaatgctgggactacaacatctgggagaacacatcggag
tgtgggagaggccattccctacgatcttcaataggaatccttttctctatccagttgatc
ctgactcttctctctctctga
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