Oncorhynchus keta (chum salmon): 118389094
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Entry
118389094 CDS
T09424
Name
(RefSeq) serum response factor isoform X1
KO
K04378
serum response factor
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118389094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118389094
Transcription factors [BR:
oke03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
118389094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
118389094
NCBI-ProteinID:
XP_035634721
EnsemblRapid:
ENSOKEG00005003543
LinkDB
All DBs
Position
10:59879179..59914019
Genome browser
AA seq
528 aa
AA seq
DB search
MLGGNGAGLGTRAGGARPGNGTGLTALQVNNPGTNMSGAEGGRFDDRIREYSAEVVYSGS
EPESDSGDDDDTMGSAGDRRGVKRERAEMEVAASTTSMGQPPGGYGGVTGGATGAKPGKK
TRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFAT
RKLQPMITSETGKALIQTCLNSPDSPPRNDPSTDQRMSATGFEETDLTYQVSEGDGCAEP
TKDMMKPTFTMANLPAGVNTQPTSTSSSTSSSSVAMHLQNSIPATCWQVSAGINTHSATS
SANGTVLKTSATSTSVMLPGGFTLMSGATLPPGTHTIPLSHLQALQGPLAQTSITTATAG
HTQQGQQTTLLRLPATVSLTGGGMGQQLQAIQVHPSSQQSSVSHSDLSHITSSSTVSLPT
TIVTSSVPSSMGGHMMYPGAHTVMYATPTTSLGDGSLTVLNTFPQTAHTQSHDPGAVSQV
FLTGHPGTVQIPVSAVQLHPMLIGQQSSSSNLTELQVVNLDAHHSKDD
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgttggggggaaacggggcaggattaggtacaagagcagggggcgcacgacctggaaat
gggactgggttgaccgctttgcaagttaataacccaggaacgaacatgagtggtgccgaa
ggtggaaggtttgacgaccgaatcagagaatactcagccgaggtggtgtacagcggctct
gaaccagagtccgattccggggatgatgatgataccatgggttcagccggggaccgaaga
ggggtgaaacgagagagagctgagatggaagtcgctgcatcgacgacgtctatggggcaa
cccccgggaggttatggtggtgtcacgggaggtgcaacaggggcaaagccaggcaagaaa
acccgcggacgagtcaagatcaaaatggaatttatagacaacaaacttcggcggtacaca
acttttagcaagaggaagactggcattatgaagaaggcctacgagctctccactctaacg
ggcacccaggtcctcctcctggtggccagcgagacgggccacgtctacacgtttgccaca
cgcaagctccagcccatgattaccagtgagacgggcaaggcgctcatccagacgtgcctc
aactcgcccgattcgccgccccgcaacgacccgtccaccgaccagcgcatgagcgccaca
ggcttcgaggagacggacctcacctaccaggtgtcggagggtgacggctgcgcggagccc
accaaggacatgatgaagccgacgttcaccatggccaatctgcctgccggtgtcaacacc
caacccacgtcgacctcatcctccacttcctcctcctctgtggccatgcacttgcagaac
agcatccctgcgacctgctggcaggtctcggcgggcatcaatactcacagtgccaccagc
agtgccaacggcacggtgctgaagacctcggccacgtcaacgagcgtcatgctacccgga
gggttcaccctcatgtccggcgcaacgcttccccctggcacgcacaccattcctctcagt
cacctgcaggccctccagggccccttggcccagaccagcatcaccaccgctaccgcaggg
cacacacagcagggccagcagaccaccctgctccgcctacctgcaactgtctcgctcaca
ggtggagggatgggccagcagctgcaggccattcaggttcaccccagcagtcagcagagc
tctgtgagccacagtgacctctcccacatcacaagcagctccacagtgagcctccccacc
accatcgtcacgtcctcggtgccctcatcgatgggtggtcacatgatgtaccccggtgcc
cacactgtcatgtacgccacacctacgacctcgttgggcgacggcagtctgaccgtgctc
aacaccttcccacagacagcccatacgcagtcccatgaccccggtgctgtatcgcaggtg
ttcctcacaggacatcctgggacagttcagatccctgtgtcggcagtgcagctccacccg
atgctgattggtcagcagtcaagcagcagcaacctcacagagcttcaagtggtcaacctg
gacgcccatcactcaaaggacgattga
DBGET
integrated database retrieval system