Oncorhynchus keta (chum salmon): 118389095
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Entry
118389095 CDS
T09424
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03013
Nucleocytoplasmic transport
oke03015
mRNA surveillance pathway
oke03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118389095
09122 Translation
03013 Nucleocytoplasmic transport
118389095
03015 mRNA surveillance pathway
118389095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118389095
03041 Spliceosome [BR:
oke03041
]
118389095
03009 Ribosome biogenesis [BR:
oke03009
]
118389095
03012 Translation factors [BR:
oke03012
]
118389095
Enzymes [BR:
oke01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118389095
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118389095
mRNA cycle factors
Stress granule specific factors
118389095
Spliceosome [BR:
oke03041
]
Complex C
Other components
EJC/TREX
118389095
Ribosome biogenesis [BR:
oke03009
]
Eukaryotic type
90S particles
Helicases
118389095
Translation factors [BR:
oke03012
]
Eukaryotic type
Initiation factors
eIF-4
118389095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
TniB
Motif
Other DBs
NCBI-GeneID:
118389095
NCBI-ProteinID:
XP_035634726
LinkDB
All DBs
Position
10:59921494..59929596
Genome browser
AA seq
406 aa
AA seq
DB search
MEVATVPRTRRLLKEEDMTKIEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHSCIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagccaccgtaccacgcacgaggcgtctattgaaggaggaagacatgaccaag
atcgagtttgagaccagcgaggaggtcgatgttactcctaccttcgacacaatgggccta
cgagaggatctcctccgtgggatctacgcatacggtttcgagaagccttccgcaatccaa
caaagagcaattaaacagatcatcaagggtagagatgtcattgcacagtctcagtcggga
acaggaaagactgccacgttttgcgtatcggtgctgcagtgtcttgacattcaggtgcgt
gaaacccaagcactgatcctggctcccaccagagagttggctggacagatacagaaggtg
ctcctagccctcggtgactacatgaacgtccagtgtcattcctgcatcggcgggacaaac
gtgggtgaggacatccgcaaactggactatggccagcacgtagtagcagggacccctggg
agagtgtttgatatgatccgcaggaggagtttgaggacgcgtgccatcaagatgctggtg
ctggacgaagcagacgaaatgctcaacaagggtttcaaagagcagatctacgacgtgtac
cggtacctgccccccgccacccaggtgtgtctgatcagcgccaccctgccccacgagatc
ctggagatgaccaacaagttcatgaccgaccccatccgcatcctggtcaaacgtgatgag
ttgactctggagggcatcaagcagttcttcgtggcagtagagagggaggagtggaagttt
gacaccctgtgtgacctgtatgacaccctcaccatcacgcaggctgtcatcttctgcaac
accaagcggaaggttgactggctgactgagaagatgagggaggccaacttcactgtttcc
tccatgcatggagacatgccccagaaggagagggagtccatcatgaaagagttccggtcc
ggtgccagccgagtgcttatctcaactgatgtgtgggcccgaggtctggatgtgccccag
gtgtccctcatcatcaactacgacctgcccaacaacagagagctgtacatccacaggatt
ggccgatcgggtcgttatggccgcaagggtgtggccatcaactttgtgaagaacgacgac
atccgtattctccgtgacattgagcagtactattccacacagatcgatgaaatgccaatg
aatgtggctgacctgatctaa
DBGET
integrated database retrieval system
