Oncorhynchus keta (chum salmon): 118389104
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Entry
118389104 CDS
T09424
Symbol
slc8a1a
Name
(RefSeq) sodium/calcium exchanger 1a isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04020
Calcium signaling pathway
oke04260
Cardiac muscle contraction
oke04261
Adrenergic signaling in cardiomyocytes
oke04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
118389104 (slc8a1a)
04020 Calcium signaling pathway
118389104 (slc8a1a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
118389104 (slc8a1a)
04261 Adrenergic signaling in cardiomyocytes
118389104 (slc8a1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oke02000
]
118389104 (slc8a1a)
00536 Glycosaminoglycan binding proteins [BR:
oke00536
]
118389104 (slc8a1a)
Transporters [BR:
oke02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
118389104 (slc8a1a)
Glycosaminoglycan binding proteins [BR:
oke00536
]
Heparan sulfate / Heparin
Others
118389104 (slc8a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
118389104
NCBI-ProteinID:
XP_035634744
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Position
10:complement(60336170..60383992)
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AA seq
973 aa
AA seq
DB search
MGQTGTSSFLFCTLQLTVLLAVFSSEITFVTAVNSNPSLGTNSSIGNQTNKKCDSVGTEC
KVGVILPIWLPENPSFGDKLARATVYFVALFYMFLGVSIIADRFMASIEVITSQEREITI
KKPNGEKVTTTVHVWNETVSNLTLMALGSSAPEILLSVVEVCGHNFDAGDLGPNTIVGSA
AFNMFVIIGLCVSVIPDGEHRKVKHLRVFFVTATWSIFAYTWLYLILAVISPGIVQVWEG
LVTLFFFPLCVGMAYVADRRLLVYKYMYKRYRAGKRRGVIIETEGEAQLPSKMDIEMDGK
MLNSEGFMDVAMGFDEKDLDEEEARKEMARILKELKQKHPEKETEQLIELANYQVLTQQQ
KSRAFYRCQATRIMTGAGNVLKKHAADQARKAVGAYEIRSEVSENDFSSKIFFDPCTYQC
LENCGTVALNVVRLGGDLTNTVSVEYRTEDGTANAGSDYQFTEGVVVFKPGETEKEIRID
IIDDDIFEEDEHFLVHLSNVKVISEGTGYGQPRANHVDTLAGLGLPCSATVTIFDDDHAG
IFTFEEPVMTVSESIGMMEVKVLRTSGARGLVVVPYKTIEGTAKGGGEDFEDMHGALEFQ
NDEIFKTIQINIIDDEEYEKNKNFFLEMGEPELLEMSERKAVLLQEIGGFVKTDKRLYGR
DVYRKVQGRDNPVPATIISIAEEGDEEALSKKEEEERRIAEMGRPTLGEHVKLEVVIEES
YEFKNTVDKLIKKTNLALLIGTNSWRQQFMEAITVSSGDDDEDECGEEKLPSCFDYVMHF
LTVFWKLLFAFVPPTDYWNGWACFVVSISMIGLLTAFIGDLASHFGCTVGLKDSVTAVVF
VALGTSVPDTFASKVAAIQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYHNSKGNDF
RVDPGTLAFSVTLFTIFAFVAVAVLMYRRRPEIGGELGGPRGPKIATTCLFFSLWLMYIV
FSSLEAYCHIKGF
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaactgggacatcatctttcctcttttgcactcttcaactcacagtgttgttg
gcagttttttcatctgaaattacatttgttacagcggtgaattcaaacccaagcctcgga
acaaactcttccattggcaaccagactaacaagaagtgtgattcggtgggtactgaatgc
aaagtgggtgtcattctgcccatatggttaccagagaacccatcctttggagataaactg
gcaagagccacagtttactttgtggccttgttttacatgttcctgggggtctctatcatt
gcggatcgcttcatggcatccatcgaggtaattacatcacaagagagggagatcaccatc
aagaaaccaaatggtgaaaaagtgacaaccactgtgcatgtatggaacgagacagtgtcc
aacctgacccttatggccctgggttcctccgccccggagattctactgtccgtcgttgag
gtgtgcggtcacaactttgacgcaggtgatctgggcccgaacaccatcgttggtagtgct
gccttcaacatgttcgttatcattggactctgtgtttctgtcattcccgatggagagcac
cggaaagtcaaacatttgagggtattttttgttaccgccacctggagtatattcgcgtac
acctggctttatctcatcttggctgtcatctcaccgggcatcgtacaagtgtgggagggc
cttgtcacactgttttttttcccgttgtgtgtagggatggcttacgttgcggatcgcaga
cttcttgtctataagtacatgtacaaacgctaccgcgcagggaagcgaaggggggtgatc
attgagacggaaggggaggctcaacttccttcaaagatggacattgaaatggatggaaaa
atgctcaactcagagggcttcatggacgtagcgatgggttttgatgagaaggacctggat
gaggaggaggccagaaaggaaatggcccggatcctgaaggaactgaagcagaagcatcca
gaaaaggagacagagcagctgatagaactcgccaactaccaggtattgacacagcagcaa
aagagtcgcgccttctaccgatgccaggctacccggatcatgacgggagcagggaatgta
ctgaagaagcatgcagcagaccaagccaggaaagctgttggtgcgtacgagatccgctcc
gaagtttcagagaatgacttttcgtcaaagatcttctttgacccctgtacataccagtgc
ttggagaactgcggtacagtggccttgaatgtagtacgccttggtggggacttgactaac
actgtttcagtggaataccgtaccgaagacggcacagccaatgccggctcggactaccag
ttcactgagggcgttgtggtgttcaaacctggtgagactgagaaggagatccggatagac
atcattgacgatgacatctttgaggaggatgagcattttctggtccaccttagcaatgtg
aaggtcatatccgagggcactggctacggacaaccaagggctaatcacgtggacactttg
gcgggccttggcctgccctgctcagccactgtgactatctttgacgatgaccatgccggg
atctttacttttgaagaaccggtaatgaccgtgagcgagagtatcggcatgatggaagta
aaggttcttcgtacctcaggagcgcggggattagtggtcgtaccctacaagaccattgag
ggtacagcaaaaggagggggagaagactttgaagatatgcacggagcgctggaattccag
aacgatgagatcttcaaaactatacagatcaatataatcgatgacgaggaatatgagaaa
aacaagaacttcttccttgagatgggagagcctgagctgctggagatgagtgagaggaaa
gctgtgttgcttcaagaaattggtggattcgtgaagacagacaaaaggctttatggcagg
gacgtctaccggaaagtgcagggtagggataaccctgtccccgccaccattatcagcatt
gcagaggaaggggacgaggaagctctctccaagaaggaggaggaggaacgccgcatcgct
gagatgggccggcctaccctcggggagcacgtcaaactggaagttgtcatcgaggagtcg
tatgagttcaagaacacagtggataagctgattaagaagaccaacttggctctattgatt
ggaaccaatagctggaggcagcagtttatggaagctatcacagtcagctctggcgatgat
gatgaggacgagtgcggcgaggagaagctgccctcctgctttgattacgtcatgcacttc
ctcaccgtcttctggaagctcctgtttgcctttgtgccgcccaccgactactggaacggc
tgggcctgcttcgtggtctccatcagtatgattggcctgctcaccgccttcattggagac
ctggcctcccactttggctgtaccgtgggcctcaaggactccgtgaccgccgtggtgttt
gtggcgctcgggacgtctgtgccagacacgtttgccagcaaggtagctgcaatccaggac
cagtatgccgacgcctccatcggcaacgtaacgggcagcaatgccgtcaacgtcttcttg
gggatcggcgtggcctggtccatcgccgccatctaccacaattccaagggaaatgacttc
cgggtggatccgggcaccctggccttctccgtcaccctattcaccatcttcgcctttgtc
gccgtggccgtgctgatgtaccggcgccggcctgagattgggggcgagctgggtgggccc
cggggccccaaaatcgcaaccacctgtctcttcttcagcctgtggctcatgtacatcgta
ttctcctccctggaagcttattgccacatcaagggcttctaa
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