Oncorhynchus keta (chum salmon): 118389207
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Entry
118389207 CDS
T09424
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like isoform X5
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04120
Ubiquitin mediated proteolysis
oke04137
Mitophagy - animal
oke04144
Endocytosis
oke04340
Hedgehog signaling pathway
oke04350
TGF-beta signaling pathway
oke04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118389207
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
118389207
04350 TGF-beta signaling pathway
118389207
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118389207
04137 Mitophagy - animal
118389207
09144 Cellular community - eukaryotes
04520 Adherens junction
118389207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118389207
04121 Ubiquitin system [BR:
oke04121
]
118389207
03029 Mitochondrial biogenesis [BR:
oke03029
]
118389207
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
118389207
Membrane trafficking [BR:
oke04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
118389207
Autophagy
Mitophagy
Other mitophagy associated proteins
118389207
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
HECT type E3
118389207
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
118389207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
118389207
NCBI-ProteinID:
XP_035634932
LinkDB
All DBs
Position
10:64603538..64691494
Genome browser
AA seq
796 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLSKKDFFLVNTILHFGSSSTGLPDPFAKVVVDGSGQC
HSTDTVRNTLDPKWNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRL
KDTGYQRLDLNKLGPNDNDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERR
TASGRIQYLNHITRTTQWERPTRPASEYSSPSGRPLSCVVDENTPVMTPNGAAIGVLPSS
GNDPRVQERRVRSQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDP
RVPRDLSNVNCEELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPNG
PGPNGPRVAMESQSQNTNLSSRQSNQLKEQQPPPQVPALSPAQLPEEAECLTVPKYKRDL
VQKLKILRQELSNQQPQAGHCRIEVCREEIFEESYRQVMKMRPKDLWKRLMVKFRGEEGL
DYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGM
AVFHGHYIDGGFTLPFYKQLLGKPITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVE
HNAYGEIIQHELKPNGKTVSVSEDTKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPQH
LLKSFDEKELELIVCGLGKIDIADWKSNTRLKHCTTDSNVVKWFWKAVESYDEERRARLL
QFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDANTNNLPKAHTCFNRIDVPAYEQYDKLY
DKLLTAIEETCGFAVE
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcaaggagttaggagaaatggcccagtgaaactgcggttgacagtgctgtgt
gcgaagaacttgtcaaagaaagacttcttccttgtgaatacaatcctccattttggctcc
tcctccacagggctgcctgacccctttgccaaagtggtggtggacggctcggggcaatgc
cactccacggacaccgtgaggaacacgctggaccccaagtggaaccaacattatgacctg
tacattgggaagtctgactccatcaccatcagtgtgtggaaccacaagaagattcacaag
aagcagggggccggcttcttgggatgtgtacgccttctctccaacgccatcaaccgcctc
aaagacaccggctatcagagactggacctgaacaagctgggccccaatgacaacgacaca
gtgagaggccagatagttgtgagtctacagtccagagaccgtatcggcacaggaggcccc
gtggtggactgcagccgtctgtttgataatgatttacctgatggctgggaggagcggaga
acagcctctggtcggatccagtaccttaaccacatcacacgcaccactcaatgggagagg
cccacccggccggcgtctgagtactccagcccctctgggcggcccctcagctgcgtggtg
gatgagaacacgccggtcatgacacccaacggagcagccatcggtgtgctgcccagcagt
ggcaatgacccgcgggtccaggagagacgcgtccgctcccagagacacaggaactacatg
agcaggacccacctccacaccccgccggacctgccagagggatacgagcaaagaaccacg
cagcagggccaggtgtacttcctccacacccagacgggcgtcagcacatggcacgaccct
cgagtgcccagggatctgagcaacgtcaactgtgaggagctgggtcctctgccgccgggc
tgggagatccgcaacacggcaacgggacgcgtctactttgtggaccacaacaaccgaacc
acgcagttcaccgacccgcgcctctccgccaacctccacctggtcctcaatccaaatggc
cctggtccaaacggtccccgcgtggccatggagagccagagccagaacactaacctcagt
agtcgtcagtcgaaccagttgaaggagcagcagccccccccgcaggtcccggcgttgtcc
ccggcccagctccccgaggaggctgagtgcctcactgtgcctaagtacaagagggacctg
gtccagaagctcaagatcctccggcaggagctgtccaatcagcagccccaggcaggacac
tgtcgcatcgaggtctgccgtgaggagatctttgaggagtcgtaccgccaggtgatgaag
atgcgtcccaaggacctgtggaagagactgatggtcaagttcagaggagaggagggcctg
gactatggaggagtggccagggagtggctgtacctgctgtcccatgagatgttgaacccc
tactacggcctgttccagtactccagagacgacatctacaccctgcagatcaacccagac
agcgccgtcaacccggagcacctgtcctacttccactttgtgggccgtatcatgggcatg
gccgtgttccacggccactacatagacgggggcttcaccctgcccttctacaaacagctg
ctggggaaacccatcaccctggacgacatggagtcagtggacccggacctccacaacagc
ctggtctggatcctggacaatgacatcacgggggtgctggaccatacattctgtgtggag
cacaatgcctacggagagatcatccagcacgaactgaagcccaacggcaagactgtctct
gtctctgaggacaccaagaaggagtatgtcaggctgtatgtgaactggaggttcctccac
ggaatcgaggctcagttcctggccctgcagaagggcttcaacgaggtcatcccacagcac
ctgctcaagtcctttgacgagaaggaactagagttgatagtgtgtggcctggggaagatc
gatatagcagactggaagagcaacacgcgcctgaagcactgcaccacggacagcaacgtg
gtcaagtggttctggaaggctgtggagtcctacgacgaggagaggagggccagactgctg
cagtttgttaccgggtcatctagagtcccactgcagggattcaaggctttacaaggtgcc
gcggggcccagactgttcaccatccaccagatcgatgccaacaccaacaatctacccaaa
gcccacacctgctttaaccggattgacgttcccgcctacgagcaatatgacaagctgtac
gataagctgctgacagccatcgaggagacgtgtggctttgcggtggaatga
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