KEGG   Oncorhynchus keta (chum salmon): 118389237
Entry
118389237         CDS       T09424                                 
Name
(RefSeq) integrin alpha-L-like
  KO
K05718  integrin alpha L
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04514  Cell adhesion molecule (CAM) interaction
oke04517  IgSF CAM signaling
oke04518  Integrin signaling
oke04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:oke00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    118389237
   04517 IgSF CAM signaling
    118389237
   04518 Integrin signaling
    118389237
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    118389237
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oke04147]
    118389237
   04515 Cell adhesion molecules [BR:oke04515]
    118389237
   04090 CD molecules [BR:oke04090]
    118389237
Exosome [BR:oke04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118389237
Cell adhesion molecules [BR:oke04515]
 Integrins
  Integrin alpha subunits
   118389237
CD molecules [BR:oke04090]
 Proteins
  118389237
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_1 ITGAX-like_Ig_3 Integrin_A_Ig_2 VWA_2 FG-GAP_2 Copine GDU_TM vWA_Rv0959 Mid2
Other DBs
NCBI-GeneID: 118389237
NCBI-ProteinID: XP_035634988
LinkDB
Position
10:65977909..66002783
AA seq 1213 aa
MLVNKVKEKMSRQGPLSLLTWMGAMAVSSMAFNIDEANPKIYKGEEKDFFGYKVLQFISG
QDKGVMVSAPYQKNRSGGICRCALDRTDCTDCYTPQETDTIKYIGLSMAGQSTSPPTFTA
CSPGLAHECDGNSYLNSICYQFNSQLQITSNFTPAFQECTKKIVDLVFLFDGSGSMTMEE
FDKNKGFIDNIMTTLKNSSIKFAAVQFSSTARTVFNFNDYKEGRALTNLWKEKHMSSLTN
THQAIDFLLKNIFENQAAGATADATKVLVIITDGDPSDTDKRFNSINRSDDKNIIRFVIG
VKNVDLTKLKSLASEPKENNTFLIQDYNGLKGILDNLQKKIFNIEGSKTALAGNLTKEMS
QSGFSAVYVNKDTLVLGSVGSNNWRGSLFETEGLRSEEREIQDPTLDKDSYMGYSVAVGK
MNENLLYFTGAPRSEHMGQILLFNKVNNNWTVAQRLSGEQMGSYFGAELCSVDIDSDGNT
DFLLVGAPMFHQPPREGRIYVYILTDKLELRMEMNVSVLVQGRFGSSISSLTDLNGDELK
DVAVGAPLEDDHRGAVYIYLGEKLKGIRPEFSQHISAARMRSKLQFFGQTIDGKMDLGED
GLTDIVVGTRGAVVVLRSRPVLSISAHLHFHPSEISTDNFDCLAKETISPVVTLTACFNM
AEATKSKAVVLSAGMNVSYTLDVDPVRQRSRAFYNDTNKGARSLLSTVELRKERTCFNHS
VYMTQCVIDTLSPIIIQLTFFQSESQQEGCTAILNTDSPTKAVVEVPFEKNCKENETCLA
ELEVDFNFITSTLLVVDQSYFNVTIRLSNHGDDSYNTSLTLLYPPGLSFSMMHLLKSTRR
TVFSCGGLEDEMDITTCSVSLPVYRSKTTAVFTSKFHILNTYDWKDTMEMTVIGLSDNGN
STNSSLTRTIPVQFAVDLVAKALPQDSTTYMNFTQEDTSPKRLVNVYEVQNLGFKSVPIT
VTFTFPTKLEHRFELKDYKISVLQNHTQCGKVINSTTEYCSPEKYCKSIECESFLLEKFL
TVTFVLSGNVSFKDLDQHAKSLSLPKKFTGDRETVNFISLVKLSYDKKRYAQTASDPGDN
STSFHQTQIDVQAEIIIHPQRDLILGTGVGVGLFLLIIITMAMYMLGCFKRKRLVDNAQE
DENEGEQREQDDAVQPITEKKLEPESEPESGAVESNSLLDDSQTENNGFPTCEAVGEGPK
EEQDVSVRSRLME
NT seq 3642 nt   +upstreamnt  +downstreamnt
atgctagtgaacaaagtgaaggagaagatgtccaggcagggacccctctccctgctcacc
tggatgggagccatggctgtctcttcaatggctttcaacattgatgaagcaaaccccaaa
atctacaagggggaggaaaaggatttctttggttacaaagtcctgcaattcatatctggc
caagacaaaggggtaatggtcagtgctccatatcagaagaacagatctggtggaatctgt
agatgtgctctagacagaacagactgtacagactgttacactcctcaagaaactgacaca
atcaagtacattggactgtctatggctggacaatctacttctcctccaacattcactgcc
tgcagccctggtctggcacacgagtgtgatgggaactcctatctgaacagtatctgttat
cagttcaacagccagctccagatcacctcgaacttcacacctgccttccaagaatgtact
aagaaaatagtggacctcgttttcctctttgacggatcaggaagcatgacaatggaggaa
tttgataagaacaaaggtttcatagacaatataatgacaaccctaaaaaactcctcaatc
aagtttgcagcagttcagttctcatcaacagccaggacagttttcaacttcaatgactac
aaagaggggagagccttgactaatctttggaaagaaaagcacatgtctagtctaaccaac
acacatcaggcgatagactttcttttgaaaaacatttttgaaaaccaagccgccggcgcc
accgcagatgcaactaaagtactggtcataataacagatggagatcccagtgatactgat
aaaaggtttaactctatcaacagaagtgatgacaaaaacatcatccgtttcgttattggg
gtcaagaatgtcgatttgacgaaactaaagtcactagcatcagagccaaaagagaacaac
actttcctcatccaggactacaacggactaaaaggaatcctagacaacttacaaaaaaag
atcttcaacattgaaggttccaagactgctctggctggaaacttgacgaaagagatgtct
cagagtgggttcagtgctgtctacgttaataaggataccttggttctgggctcagtgggg
tcaaacaactggcgtggatctctctttgagactgagggtctgagatccgaggaaagggaa
attcaggaccccactttggacaaagactcctatatgggatactctgtagctgttgggaag
atgaacgagaaccttctatattttaccggagcaccaagatctgaacacatgggacagatc
ctacttttcaacaaggttaacaacaactggactgtggcacaaagattgtctggagaacag
atgggctcctactttggggcagagctgtgttctgtggacatagactcagacggcaacaca
gacttcctcctggtcggtgcaccaatgtttcaccaaccaccgagagagggcaggatctac
gtctacattctaactgataagctggaactgaggatggagatgaatgtttcagtgctggtt
cagggtagattcggctcctccatctcctctctcacagacctgaatggagatgagctgaag
gatgtagctgtgggcgctccacttgaggacgatcacaggggggccgtgtacatctacctg
ggtgaaaagctaaaggggatccgccctgaattcagccagcacatctcagctgcgaggatg
agatctaagctccagttctttggccagacgattgatgggaagatggacctgggtgaggat
ggactgactgatatcgtagtaggaacgcgtggcgcagttgtcgtcttgaggtcccgaccg
gtcctcagcatctctgctcatctccacttccatccctcagagatcagcactgataacttt
gactgtctggcaaaagagaccatttcccctgtggtgactctgacagcctgctttaacatg
gcagaggcaacaaagagtaaagctgtggtgctgagtgcagggatgaacgtctcctacacg
ctggatgtggatccagtgagacagaggagccgggccttttacaatgacacgaacaaaggg
gccagaagtcttctctctactgtggagctgagaaaggagcggacctgcttcaaccactca
gtctacatgacacaatgcgtaattgacacattatcgcccataatcatccaacttacattt
tttcaatctgaaagccaacaagagggttgtactgccattctgaatactgacagtcctaca
aaggctgtggttgaggtgccctttgaaaagaactgcaaagaaaatgaaacctgtttggca
gagcttgaggtggacttcaacttcatcacatcaactttattagtggtggaccaaagttac
tttaatgtgactataagactgtccaatcacggggatgactcctataacaccagtctaacc
ctcctctaccctcctggcctctcattctccatgatgcatcttctgaagtccacaaggaga
acggtgttcagctgtggtggtctggaagatgaaatggacataactacatgcagtgtcagc
ctccctgtctaccgtagtaaaactaccgctgtgttcaccagtaaattccatattttgaat
acatacgactggaaggacacaatggagatgaccgtcatcggactgagcgacaatggaaac
tcaaccaatagttccctaacccggaccatccctgttcaatttgcagttgacctggtagca
aaagcccttccccaagactccaccacttacatgaactttactcaggaggacacatcacct
aaaagactggtgaatgtatatgaggtgcagaacttgggatttaagtctgtacccatcaca
gtcaccttcactttcccaactaagcttgagcacagatttgaactgaaggactacaaaata
tctgtcttacagaaccacactcaatgtggaaaggttatcaattcaacaacagagtactgc
tctccagaaaaatactgcaaatccatcgagtgtgaaagtttccttttggagaagtttttg
acagttacatttgtgctgtctggaaatgtttccttcaaggacctcgatcaacatgcaaag
agcttgtcattgccaaagaaattcactggggacagagaaacagtcaacttcatcagttta
gtcaaactcagctatgacaaaaaacgatatgcccagacagcgagtgacccaggggacaac
tctacaagcttccaccaaacacagattgatgtccaggctgagatcatcattcatccacaa
agagatctgatactagggacaggagttggagtaggactctttctcctgatcatcatcaca
atggccatgtatatgctgggatgtttcaagagaaaaaggcttgttgataatgcacaggaa
gatgagaatgaaggggaacagagggagcaagatgacgctgttcagcctataacagagaaa
aagctagagcctgagagtgagcctgagagtggagcagtggagtcaaattctctccttgac
gacagtcaaacagaaaacaatggcttccccacttgtgaggcggtaggggagggaccaaaa
gaagaacaggatgtgtcagtcagaagcaggctgatggagtag

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