Oncorhynchus keta (chum salmon): 118389324
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Entry
118389324 CDS
T09424
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118389324
Membrane trafficking [BR:
oke04131
]
Endocytosis
Others
Others
118389324
Endosome - Lysosome transport
118389324
Endosome - Golgi transport
118389324
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
118389324
NCBI-ProteinID:
XP_052383738
LinkDB
All DBs
Position
10:complement(69326370..69548085)
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AA seq
1246 aa
AA seq
DB search
MPAMDTWLGFCPGLHLTLCTWFLISAHTQLNAKAEITCALCQSPVQLHLKELQLDTGTHA
AEGTRHAAKALEQVRLEYQLLGVTDQNTGVPSDTQQAGVLVDEPRFTDDGVTPKVALEDL
TGSSENEERYVGEYNIGVDDLAKVKDGAEDVALRRAKRSGPEPPEFRESLNTSDERRSPG
PLLDGHRLGRSEFKWNRDEGRGTSRGDEPKLSSTTFALTGDSAHNHAVVYWSGQNSSVIL
ILTKLYDFHLGSVTESTLWRSTDYGSTYERMNDKVGSKTVLSYLYVCPSNKRKIMVLTDP
EFESSVLISSDEGASYQKYRLSFYILSLLFHPTQEDWALAYSHDQKLYASMDFGRKWQLV
HEHVNRFYWSVTGLDKESDLVHMEAHTPNGRIQYVTCQALTCSEANRNYPFPGYIDISSL
VVQDDYMFIQVTTAGQASYYVSYQRDPFLKIKLPKYSLPKDLHIVSTDEHQVFAAVQEWN
QNDTYNLYLSDTRGILFTLAMENVKTTRGLGGNQMLDLYEVAGIKGMLIANRRLDNQVKT
YITYNKGRDWRLLQAPATDLAGNDIHCILPFCSLHLQLQTSENPYLSGSISTKASAPGII
VATGNIGSDLSYNNVGMFISSDAGNNWRQIFEEEHNVWFLDKGGALVAVKQPTVPTRHLQ
ISFDEGRQWTRHSFSLVPLFVDGMLVEAGTENQIMTFFGHFSHRSEWQLIKIDYKSIFNR
KCTEGDYQTWHLHNKGEPCVMGQKQIYMKRRPGNYCMLGKDYAKVLSAESCICRAHDFEC
DYGYERRREGNCLPAFWFNPAVVSRSCSQGQNYLNSTGYRKVVSNNCIKGVKDMYTPRKQ
MCPNRAPKGLSLSTREGKLTANLHTNVTFLVHLDEGDSMRTNIQLDFGDGTAVSYSNLSW
IEEGIRHVYKTAGIFRVSALAENTLGFDTTTLYLHITCPVEHVQLLAPFVAIKNKEVNLT
AVVWPIHSRTLTYFWWLGNSTEPVISLDGSISYTFTSEGMNTVTVQVSSANAILQDTKTI
AVQDFFKSLLLSFSPNLDEYNPDVPEWRQDVGRVIKKALLQVSDFPEDQLLVAVFPGVPT
AAELFLLPHKNQSEGRKKSEKELEQISEILASALNQNLVEFELKPGARVIVYITQLTLAP
LVDSIPRHSSSAMLMLLSAVFLGLAVFLIYKFKRKIPWMNIYAEVNQEKEQEMIGSVSQS
DSTPKTTLSEFSTPKEVMEKEMDARVKRRIGNACESTREIPNCTSV
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaatggatacttggcttggcttctgcccaggtttgcacttaactctgtgtacc
tggtttctgatctccgctcatacccagctaaatgccaaggcggagataacttgcgcattg
tgccagtcgccggtccagctacacctgaaggaattacagctggataccggtacgcacgcg
gctgaaggtacgaggcatgcggccaaagctttggaacaggtccgactggagtaccagcta
ctcggagttactgaccaaaatactggagtaccaagcgacacccaacaggcaggtgttctc
gtggatgagccgagattcactgacgatggagttaccccaaaagtcgctctggaagattta
accgggtctagtgaaaacgaagaaaggtacgttggtgaatataatattggggtggatgat
ttggctaaggtcaaggatggtgctgaggatgttgcgttacggagagcgaagcgaagcggt
cccgaaccccccgagtttagggagagccttaatacatcggatgagagaaggagtcctggt
ccgttactggacggacacagactgggccgatccgaattcaagtggaacagggacgagggt
cgagggacttccagaggagatgaacccaaactaagcagcactactttcgccttgaccggg
gactcagcgcataaccacgcagtggtttactggtcggggcaaaacagcagcgtgatcctg
attctgaccaaactttatgactttcacttggggagtgttacagagagcaccttgtggagg
tcaacagactatggctctacctatgagagaatgaatgacaaagtgggatctaagactgtg
ctcagttacctgtatgtctgtccatccaacaagagaaagataatggtgctgacagaccct
gagtttgagagcagtgtgctcatcagctcagatgaaggagcgagctaccagaaataccgc
ctcagcttctacattctaagccttctgttccatccgacacaggaggactgggctctagcc
tacagccacgaccagaagttgtacgcctccatggactttgggagaaaatggcagctggtt
catgagcatgtgaacaggttctactggtctgtaacgggtctagacaaggagtcagatctg
gttcacatggaagcacacacccccaatggacgtatacagtatgtaacatgccaggctctc
acttgctcagaggccaacagaaactaccccttccctgggtacatcgacatcagctcactg
gtggtccaagatgactatatgtttattcaggttactacagcaggacaggccagctactat
gtgtcctaccagagggatccattcctcaaaatcaaactgccgaaatattctctgcctaaa
gacctccacattgtcagcacagacgagcaccaggtgttcgcggcagtacaggagtggaac
cagaacgacacatacaacctgtacctctccgacacccggggaatcctcttcaccctggcc
atggagaacgtcaagaccacccgtggcctggggggcaaccagatgctggacctgtatgag
gtagcaggtatcaaaggcatgctgatcgcaaacaggaggctagacaaccaggtgaagacc
tacatcacctacaacaagggtcgtgattggcggttactacaggccccggcgacagacctg
gctggcaacgacatccactgtatactgcccttctgttcgctccatctccaactgcagacg
tctgaaaacccctacctgtcaggcagcatatcaaccaaggcctcagcaccgggaatcata
gtggccacagggaatattgggtctgacctgtcgtacaataacgttggaatgttcatctca
tctgatgctggtaacaactggagacagatattcgaggaggaacacaacgtctggtttctg
gataaaggaggagcccttgtcgctgtgaaacaaccaaccgtccccactagacatttacag
atcagttttgatgaggggcggcagtggaccagacacagcttctccttggtgcctctgttt
gtggacgggatgctggtggaggccgggacagagaaccagatcatgacgttttttggacat
ttcagccataggtctgagtggcagcttatcaagatagactacaagtccatcttcaacagg
aaatgtacagaaggagactatcagacgtggcaccttcacaacaagggcgagccgtgtgtg
atgggccagaaacagatctatatgaaacgcagaccaggaaactattgcatgctgggaaaa
gactacgccaaagtcctctctgctgagtcgtgtatctgtcgggcccacgactttgaatgt
gattatggctatgaacggcgtagagaagggaactgtctaccagcgttctggttcaaccca
gctgttgtatcaaggagctgcagccaaggacagaattacctcaacagcacagggtaccga
aaagtagtgtccaacaactgcatcaagggagtcaaggacatgtacacacccaggaagcag
atgtgtcccaacagggctccaaaaggcctttctctctccaccagagagggcaagcttact
gccaacctgcacaccaacgtcaccttcctggtgcatctggatgagggtgactcaatgaga
accaacatccaactggatttcggagatggcacggcagtctcctactccaacctgagctgg
atcgaagagggtatcagacatgtttacaagacggctgggatattccgtgtctcagccttg
gcggaaaacaccctgggatttgacactaccacgttgtaccttcatattacgtgtcctgtg
gaacatgtccagttgctggctccatttgtggccatcaagaacaaggaagtaaacctaaca
gcagtggtctggcccatccactcaaggaccctcacctacttctggtggctggggaacagc
actgagccggtgatcagcttagatgggagcatctcgtataccttcaccagcgagggaatg
aacactgttacggtccaagtgtcttcagccaacgccatactgcaagacactaagacgata
gcagtccaagatttcttcaaatctctgcttttgtctttctcccctaacctggacgagtac
aaccctgatgtccccgagtggagacaggatgtggggagagtcattaagaaggctctgctc
caagtgtcagactttccagaggatcagctattggttgcagtgtttccaggtgtgccaacg
gccgctgagctcttcctgttaccacacaagaaccaatcagagggccggaaaaagagcgag
aaggagctagagcagatctctgagatacttgccagcgctctgaaccagaatctggtggag
tttgagctaaagccaggagcaagagtaattgtgtacataacacagctaactttggcacca
ttggtggattccatcccgagacacagcagttcagccatgctgatgctcctgtcagcagta
ttccttggtttagcagtgtttctcatctacaaattcaagagaaaaatcccctggatgaac
atatacgcggaggtgaaccaggagaaagagcaggagatgatcggttcggtcagccagagt
gacagcacgcctaagaccaccctcagtgagttctctacgcccaaagaagtcatggagaag
gagatggacgccagggttaaacgacgaattggaaatgcctgtgagagcacaagggagatt
cctaactgtactagcgtgtaa
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