Oncorhynchus keta (chum salmon): 118389383
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Entry
118389383 CDS
T09424
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04517
IgSF CAM signaling
oke04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118389383
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118389383
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
118389383
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
118389383
Intermediate filaments
Intermediate filament-binding proteins
118389383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
118389383
NCBI-ProteinID:
XP_052383363
LinkDB
All DBs
Position
10:59272000..59359124
Genome browser
AA seq
2350 aa
AA seq
DB search
MTTVAAEYEHMEITQQYSSSDTVNNRWDDEWDNENSSARLFERSRIKALADEREAVQKKT
FTKWVNSHLSRVSCRITDLYRDLSDGRMLIKLLEVLSGERLPKPTRGRMRIHCLENVDKA
LQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETDGDNKEKRSAKDA
LLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHHNLQNAF
NLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMVEKYESLASDLLEWIEQTIIILNNRKFANSLNGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKTWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVDAATKKHEAIETDITAYEERV
QAVVSVAKELEAEKYHDIKRITARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEML
YIMDWMDEMKMMLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAVNNNAQKFAIDG
DVYKPCDPQVIRDRVAHMEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKE
QILSSDESGKDLTGAVRLLSKHRTLEDEMNGRAGHLQHTIAEGQAMADGGHFGAAKIRDR
IADLRAQWAALEELAGVRKAHLEEACALHQFQADADDADAWTLDALRIVSSSEVGHDEFS
TQALVRKHKDAAAEVASYRPVIDALHEQAAALPEEQAQSEEVKGRLAGIEERYKEVAELT
RLRKQALQDALALYKMFSEADACEVWIDEKDQWLNSMEIPEKLEDLEVIQHRFESLEPEM
NNQASRVAVVNQIARQLMHNGHPSEKDIKAQQDKLNNRWSQFRDLADQKKESLISALGVQ
NYHLDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLGDLRGE
AERLAGEHPDQAKAITGRLAEITAVWEEMKATLRNREESLGEASKLQQFLRELDDFQSWL
SRTQTAIASEETPNTLAEAEKLLAQHDGIKNEICNYEEDYQKMRDMGEMVTQGQTDAQYM
FLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEVFLNNQEYMLAHTEMP
TTLEGAEGAIKKQEDFMTTMDANEEKINGVVEAGRRLASDGNINADRIQERAASIDDRHK
KNREAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIEKDGMQLVLEKPETESVVKEKLSALQKMWEELESTTQTKAQCLFD
ANKAELFTQSCADLDKWLGGLEGQIQSDDYGKDLTSVNILLKKQQILENQVEVRQREVVE
LQSQALVLSQEGKDTGEVDGQRQMVEHKFKELLDPLRKRKNFLVASREIHQFNRDVEDEI
LWVEERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRFDDIFERSESLLMEDSLA
VEAIRQRLADLQQLWGLMIEETEKRHVRLEEAHNAQKYYFDAAEAEAWMSEQELYMMSEE
KAKDEQSSVAMLKKHQIVEQSVEDYAETVHQLSKTSRGLTAAGHPESERIGMRQSQVDKL
YAGMKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDAVNRLADELINAGHADAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASYELHKFYHDAKEILSRILDKHKKLPEEVGRDQNTVETLQRMHTTFEHDIQALGTQ
VRQLQEDAVRLQSAYAGDKADDIQRRESEVLEAWNTLLEACDGRRVHLLDTGDKFRFFSM
VRDLMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLA
RKHYASEEIKDKLLQLMDKRKDMIDKWEDRREWLRLILEVHQFGRDAGVAEAWLLGQEPY
LFGRELGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERMRK
PPSPEPLPEQDSPLQSGVENGLQNGLPSDQDSPQNGVDRVEIMNGVAEQNSKDPSPIPSP
TASRRGKGSLSSTLPTQNQDLPAAQLEGFLHRKHEWEGHNKKASSRSWHNVYCVINNQEM
GFYKDNKAAGQGIPYHNAIPISLMGAVCDVAMDYKKKKHVFKLRVTDGNEYLFQAKEEEE
MSTWIQAILNAGTPDKVSITPSNQSTPASSRAQTLPATVTLTSESSPGKREKDKEKDKEK
RFSLFGKKKL
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtggccgcggaatatgagcacatggagatcacgcagcagtacagcagcagc
gacacggtcaacaaccgctgggatgatgagtgggacaacgagaacagctcagctcgcctg
tttgagcgttcgcgcatcaaggccctggcagatgagcgcgaagcggtgcagaagaagacc
ttcaccaaatgggtgaactctcacctctcccgggtgtcctgccgcatcaccgacctgtac
agggacctgagtgatggacgcatgctcatcaaactgctggaggtgctgtctggggagaga
ctgcccaagcccaccaggggacggatgcgtatccactgcctggagaacgtggacaaggcc
ctgcagttcctcaaggagcagagggtccacctggaaaacatgggctcacatgacatcgtt
gacggcaaccaccgcctcaccctgggcctcatctggaccatcattctcaggttccagatc
caggacatcagtgttgagactgatggagacaacaaggagaagagatcagccaaggacgcc
ctgctcctctggtgccagatgaagactgctggctatccaaacgtgaacattcacaatttc
agcaccagttggcgagacggcatggcattcaatgccctcatccataagcacaggccagac
ctgattgactttgacaagctgaaaaagtccaatgcccaccacaacctgcagaatgccttc
aatctggctgagcagcatcttgggcttaccaagctcctagacccagaggatatcagtgtg
gaccaccccgatgagaagtcggtcatcacatacgtggtgacgtactaccactacttctcc
aaaatgaaggcgctgaaagtggaggggaaacgtattgggaaggtactggacaatgccatt
gagacagagaagatggttgagaagtacgagtctctggcctcagacctgctggagtggatc
gagcagaccatcatcatcctcaacaatcgcaagtttgccaactctttaaacggggtgcag
cagcagcttcaagccttcaacacatatcgcacggtcgagaaaccccctaagtttactgag
aagggcaacctggaggtgcttctgtttaccatccagagcaagatgagggccaacaatcag
aaagtctacatgcccagggagggcaaactcatctctgacattaacaagacctgggagaga
ctggagaaggcggagcatgagcgggagctggctctgaggacagagctgattcgacaggag
aaactggagcagctggctcgccgctttgaccgcaaggctgccatgagggagacctggctg
agtgagaaccagcgcctcgtctcacaggacaactttggcttcgaccttccggcggtggac
gcggccaccaagaagcatgaggccatcgaaacggatattacggcgtacgaggagcgtgtg
caggccgtggtgtctgtcgctaaggagctggaggcagagaagtaccacgacatcaaacgc
atcacagcgcgcaaggacaacgtgatccggctgtgggagtacctgctggagcttctgaag
gcgaggcgccagcgcctggagatgaatctgggtctgcagagggtcttccaggagatgctt
tacatcatggactggatggacgagatgaagatgatgctgctgtcccaggactatgggaag
catctgctcggagtggaggatctcctgcagaaacatgccctggtagaggccgacatcggc
atccaggctgaccgtgtcaaagctgtcaacaacaatgcccagaaattcgcaatcgacggc
gacgtttacaagccctgtgaccctcaggtaatacgcgaccgcgtggcccacatggagttc
tgctaccaggagctgacccagctggctgccgagcgccgggcccgcctggaggagtcccgc
cgtctctggaagttcttctgggagatggccgaggaggagggctggatccgtgagaaggag
cagatcctgtcgtcggacgagagcggcaaggacctgacgggggctgtgcgcctgttaagc
aagcaccgcaccctggaggacgagatgaatggccgtgccggtcacctgcagcacaccatc
gccgagggccaggccatggccgacggtggccacttcggcgccgccaagatccgcgaccgc
atcgccgacctgcgggcgcagtgggcagcattggaggagctggcgggcgtgaggaaggcc
catctggaggaagcgtgtgccctgcaccagttccaggcggacgcagacgatgccgacgcc
tggaccctggatgccctgcgcatcgtgtccagcagcgaagtgggccatgacgagttctcc
acacaggccctggttcgcaagcacaaggacgccgccgccgaggtggccagctatcggccg
gtgatcgatgcgctccatgagcaggcggccgccttgcctgaggagcaggctcagtcagaa
gaggtcaagggccgcctggcaggcatagaggagcgctacaaggaggtggccgagctgacc
cggctgagaaagcaggcactgcaggacgccctggccctctacaagatgttcagcgaggcg
gacgcctgcgaggtgtggattgatgagaaggatcagtggctcaacagcatggagatccca
gagaagctagaagacctagaggtcattcagcacaggttcgagagcctggagcctgagatg
aacaaccaggcgtcacgcgtcgctgtcgtgaaccagatcgccaggcagctgatgcacaac
ggacaccccagtgagaaggacataaaagcccagcaagataagctcaataacagatggagc
cagttccgggatctggcggaccagaagaaggagtctctaatctccgcgctgggtgtgcag
aactaccacctggactgcaacgaaaccaagtcgtggatccgcgagaagacaaaggtcatt
gagtccacccaggagctgggcaacgacctgacgggtgtcatggcgctgcagcgcaaactc
actggcatggagcgtgacctggctgccatcgaggacaagctgggcgacctgcgcggcgag
gccgagcggctggccggcgagcacccagaccaggccaaggccatcacgggccgcctggcc
gagatcaccgctgtgtgggaggagatgaaggccacactgcgtaaccgcgaagagtccctt
ggcgaggccagcaaactgcagcagttcctgcgcgaactggatgacttccagtcgtggctg
tcgcgcacacagacagccatcgcctcggaggagacgcccaacacgctggctgaggcagag
aagctgttagcacagcacgacggcatcaaaaacgagatctgcaactacgaggaggactac
cagaagatgcgcgacatgggcgagatggtgacccagggtcagaccgatgcccagtacatg
ttcctgaggcagcggctacaggccctggacacaggctggaacgagctgcacaagatgtgg
gagaaccggcagaacctgctgtcacagtcccacgcctaccagctgtttctcagggacacc
aagcaggccgaggtcttcctcaacaaccaggagtacatgctggcccatacagagatgccc
actacgcttgagggggccgaaggagccatcaaaaagcaggaggacttcatgaccaccatg
gacgccaacgaagagaagataaacggcgtggtggaggctggcaggcggctggcgagcgac
ggcaacatcaacgccgaccgcatccaggagagagcggcgtctattgacgacaggcataag
aagaaccgcgaggctgctgtggagctactgatgaggctgaaggataaccgggaccttcag
aagttcctacaggattgccaggagctgtctctgtggatcaatgagaagatgctcacggcc
caggacatgtcgtacgacgaggccaggaacctccacagcaaatggctcaagcatcaggcc
ttcatggccgagttgcagtccaacaaggagtggctggacaagattgagaaggatgggatg
cagctggtgttggagaagcctgagacagagtcggtggtcaaggagaagctctcagccctc
cagaagatgtgggaagagttggagtccaccacccagaccaaggcccagtgcctgtttgac
gccaacaaggccgagctgtttacacagagctgtgccgacctggacaagtggctgggtggc
ctggagggccagattcaatcggacgactacggcaaagacctgaccagcgtcaacatcctg
ctcaagaagcagcagatattggaaaaccaggtggaggtccgtcagagggaggtggtggag
ctgcagagccaggcgctggtcctcagccaggaagggaaggacacgggggaggtggatggc
cagagacaaatggtggagcacaagttcaaagagctgctggacccgctgaggaagagaaag
aacttcctggtggcctcccgcgagatccaccagttcaaccgcgatgtggaggacgagatt
ctttgggtcgaagagaggatgccaattgcaacctccacggatcatggccacaacctgcag
accgttcaactgcttatcaagaaaaatcagaccttgcagaaggagatccagggacaccag
ccccgcttcgatgacattttcgagcggagcgagagcctgctgatggaggacagccttgcc
gtggaggccatccgccagcgcctggccgacttgcaacagctgtggggcctgatgattgag
gagacggagaagcgtcacgtccgactggaggaggcccacaatgcacagaagtactacttt
gatgccgctgaggctgaggcctggatgagcgagcaggagttgtacatgatgtctgaggag
aaggccaaggatgagcagagctccgtagccatgctgaagaagcaccagattgtggagcag
tcggtggaggactacgcagagacagtccatcagctctccaagaccagcagaggcctgaca
gctgcaggacatccagagagtgagaggataggcatgcgtcagtctcaggtggacaagctc
tatgccggcatgaaggacctgtctgaggagaggcggggcaaactggatgagcggttccgc
ctgttccagctcaaccgcgaggttgacgacttggagcagtggattgccgagcgggaggtg
gtggccggatctcatgagctgggacaggactacgagcatgtcaccatgctccaggagcgc
ttccgggagtttgcgcgcgacacaggcaatatcggccaggagcgcgtggatgcagtcaac
cgcctggccgatgagctgataaatgcgggccacgcagatgccgccacggtagccgagtgg
aaggatggactcaacgaggcctgggctgacctgctggaacttatcgacacgcgcacgcag
atcctggccgcctcctacgagctgcacaagttctaccatgacgccaaggagatcctgagc
cgcatcctggacaaacacaagaaacttccagaggaggtgggacgtgaccagaacacagtg
gagacactgcagaggatgcacaccaccttcgagcatgacatccaggccctgggaacacag
gtgaggcagctgcaggaggatgccgtccgcctccagtcggcctatgccggcgacaaggca
gacgacatccagcggagggagagcgaggtgctggaggcctggaataccctgctggaggcc
tgcgatggccgcagggtccacctcctggacacgggcgacaaattccgcttcttcagcatg
gtgcgcgacctcatgctgtggatggaggacgtcatccgtctcatcgaagcccaggagaat
ccaagggacgtgtcctcggtggagttgttgatgaacaaccatcagggtatcaaggctgag
atcgacgcccgcaatgacagcttcaccgcctgcattgagttgggcaagtctctgctagcc
agaaagcactatgcatcagaggagatcaaagataagttactacagctgatggacaaaagg
aaagacatgattgacaagtgggaggaccgacgggagtggttaagactgattttggaagtt
caccagtttgggagggatgcaggggtggcagaggcgtggctgctgggacaggaaccatac
ctattcggccgggagttggggcagagcgtggacgaggtggagaaactgatcaagaggcac
gaggcattcgagaagtcggccgccacttgggaggagcgcttctcagcactggagaggttg
actacgttggagttattggaagtgagaagacagcaagaggaagaagaaagaatgcgaaaa
cccccttcgccagagcctttaccggagcaagactcaccactgcagagtggagtagagaac
ggactgcagaatggactgccctcagaccaggattccccacagaatggtgtggacagagtt
gagatcatgaatggagtggcggagcagaactcaaaggacccgagccccattccctcaccc
acagccagccggcggggcaagggcagcctgtcctccacattgccgacccagaaccaggat
ttgcctgcagctcagctggagggcttcctgcatcgcaagcatgagtgggagggtcacaac
aagaaggcctcaagcagatcctggcataacgtgtactgcgttatcaacaatcaggaaatg
ggcttctacaaagacaacaaggctgctggtcaaggcatcccctaccacaatgcgattccg
atcagtctaatgggggctgtgtgtgatgtggccatggattacaaaaaaaagaaacatgtc
ttcaaactcagagttacggatggaaatgagtatctcttccaagccaaagaagaagaggag
atgagcacatggatccaggccattctgaatgcggggacacctgacaaggtatcgattacg
cccagcaaccagagcactccggcgtcaagccgagcccagaccctgcccgccactgtcacc
ctcaccagcgaatccagcccgggcaagcgggagaaagacaaggagaaggacaaggagaag
cgattcagcctgttcggcaagaaaaaactataa
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integrated database retrieval system
