Oncorhynchus keta (chum salmon): 118389410
Help
Entry
118389410 CDS
T09424
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118389410
Membrane trafficking [BR:
oke04131
]
Protein recycling
Others
Others
118389410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PSII_BNR
Motif
Other DBs
NCBI-GeneID:
118389410
NCBI-ProteinID:
XP_052382029
LinkDB
All DBs
Position
10:68300903..68448129
Genome browser
AA seq
1275 aa
AA seq
DB search
MERVVRLCPIWHNNVLGFMLLIIIYFFLAAKSELTCRSCQPGDKGRIKELLLKTDTREFA
TGYGEEVISNGDGATASRSLNSASAETQQLDCAAGSDACIQGKYIYSRRKRNTDMLFRSK
NALLDGGMHYGGGKQRKFTPRGEYKVSNLKMNLHAGNTDVGKFRADLIPGITHKHRVRRN
SPRANIGDDKVKSSGSPKRRETLPLSYYREGITSPAGRSRVTRSELRWSNEDRRAASSRQ
DELKLTSSTFALTGDSAHNQAMVHWSGQNSSVILMLTKLFDFNLNSVTESSLWRSTDYGT
TYQKLNEKVGAKTILSYLYVSPNNKRKIMLLTDPEVESSLLISSDEGATYQKYRLSFYIL
SLLFHPEQEDWILAYSHDQKLYSSVEFGRRWQLVHERVAPNRFYWSKTGLDKEPGLIHLE
TIISEGQALYVTCKLQNCTEANKGKPFPGYIDPNSLVVQDEYVFVQVSTGGRPIYYVSAK
REVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNDTYNLALENVSADCIIYNVMID
LYEVAGIKGMFLANKKTDSVVKTYITYNRGRDWRLLQAPTADLRGNSIRCELPYCSLHLH
LHVSANPYTSGNIESKDSAPGIIVASGSIGAELTTSNVSMFITSDAGNTWRQIFDEEYSV
LYLDQGGALVAIRHTPLPIRHLWMSFDEGRQWNKYSFTMSPLFVDGLLGEPGEETLIMTI
FGHVSHRSEWQLVKIDFRSIFNRRCTEGDYQTWHLHNRGEPCIMGVKRIYRKLKPIARCV
MGKTYSVTMTSAPCDCTEADFECDYGYERRSDGKCTPAFWFLPSSMSRSCTTGTTFINST
GYRKVVSNNCTAGVIAEYTARRQHCPTQAPKGLHLVTSEGKLTATLGTNVTFLVFLEEGD
GARTSIMVDFGDGHALTYSNVSSIEDGVKHVYKAVGIYRVSATGENRLGSESVVLYLHVT
CQLEYIHLSAPFVAVKSKEVNLTAVLWPSQVGTVTYIWWFGNNTEPIITLEGSVACTFSR
EGVNTVTVQVSAGNAILQDRKTIAVHEYFRSHLLAFSSNLDDHNPDVAEWRLDVSRVIKN
SMVKATGLSPELLLVTVLPGLPTAAEFFLLPDKELTEGKPEKNSAHLDQLSEILLSALNQ
NLVQFTLRPGVQVTVYTAHLSAAPLVDTSENHSGSAMLMLLSVVVLGLAIFVVYKFKRKI
PGLNVYAQMQNEKEQEMIPSPVSPTESTLVSPNTPMELVTSPELMDTELNTRPIGCIKPH
AHVKFSTELPTYINI
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggagagggttgtcagattatgccctatttggcacaataacgttttggggtttatgctt
ttgataatcatatatttctttctagccgctaaatcagagctaacttgcagatcatgtcag
ccgggagataaggggcgtattaaggaattactgctcaaaacggacacacgagaattcgca
acagggtacggagaggaagttatttcaaatggagacggggcaactgcttcacggagttta
aattctgcaagtgccgaaactcaacagcttgattgcgcagctgggtccgatgcatgcatc
caggggaaatacatctactcaaggcgaaaacggaatactgacatgctgttccgttccaag
aacgcactactcgatggaggaatgcactacggtggtggtaaacagagaaaattcaccccg
cgcggtgagtacaaagtttccaacctgaaaatgaaccttcatgcaggaaatacagatgtc
gggaagtttcgcgcagatttaattcccggcatcacacacaagcaccgagttcgtaggaac
agcccgagagctaatattggggacgataaagtgaagtcctccggctcacccaagagaagg
gagacgctgccactgagttactatcgagagggcatcacctcaccggctgggcgcagcaga
gtgacacggtccgaattgcgatggagcaacgaggacaggagagcggccagttcgaggcag
gacgaactcaaactcaccagttcaaccttcgctttgaccggagattccgctcacaaccaa
gccatggtgcactggtctgggcaaaatagcagtgtgattctcatgctgaccaagctgttt
gacttcaacctgaacagtgtcacggagagctcgttgtggagatcaaccgactacggaacc
acttaccagaagctcaatgagaaagtgggggcgaaaacaatcctcagctacttgtacgtc
agtcccaacaacaagagaaagatcatgcttctgactgacccggaggtggaaagcagcctg
ctgatcagctccgatgagggagccacctatcagaagtaccgcctcagcttctacatcctc
agccttctcttccaccccgagcaggaggactggatccttgcctacagccatgaccagaag
ctgtacagctcggtggagtttggaaggaggtggcaacttgtccatgagagggtggctccc
aatcgattctactggtcaaaaacgggtttagacaaagaaccgggcttaattcacctggaa
accatcatctctgaaggacaggcgctgtacgtcacctgcaagctgcagaactgcaccgag
gccaataagggcaagccgttccctggctacattgaccccaattcccttgtggtgcaagac
gagtatgtgtttgtccaggtgtcaactggtgggcgtccaatctactacgtgtcagccaag
cgggaagtcttcacacccatgaagctacccaaatacaccttgcctaaggatctgcatgtg
atcagtacggatgagaaccgggtggttgcggcggtgcaggagtggaaccagaacgacacc
tacaacctggccctggagaacgtgtcagcagactgtataatatacaatgtcatgatagac
ctgtatgaggtggcgggaataaaagggatgttcctcgccaacaagaagactgacagtgtg
gtgaagacttacatcacctacaacagagggagagactggaggctcctgcaggctcccact
gctgacctgaggggcaacagcatccgctgtgaactaccatactgttccctacacctccac
ctgcatgtgtcggccaacccctacacgtcggggaatatcgagagcaaggactctgccccg
gggatcattgtggcctcaggctccatcggagcggagttgaccaccagcaacgtgagcatg
ttcatcacctcggacgccggcaacacgtggagacagatctttgatgaggagtacagtgtt
ctctacctggaccaaggaggggccctggtggctataagacacactccactccccatccga
cacctatggatgagtttcgacgaggggagacagtggaataaatacagtttcaccatgtcg
cctctgtttgtggacgggttgctaggggagccgggggaggagactctcatcatgacgatc
tttggccacgtcagtcaccggtccgagtggcagctagtcaagattgacttcaggtccatc
ttcaaccggagatgtacagagggggattaccagacatggcacctacacaaccggggcgag
ccgtgcatcatgggagtgaaaagaatctacaggaagttgaagcccatagccaggtgcgtt
atgggtaagacatactctgtcacgatgacctcggcgccctgcgactgcacagaggccgac
tttgagtgtgactatggctacgagaggcggagtgacggcaagtgcacccccgccttttgg
ttcctcccatcgtccatgtctagaagctgtaccacagggactactttcatcaacagcact
ggctacaggaaggtggtgtccaataactgcacagcgggagtcatagcagagtacacggcc
aggaggcagcactgtcctacccaggcccccaaaggcctgcacctcgtcaccagtgaagga
aagctgacagctacgctgggcaccaatgtcaccttcctggtgtttcttgaagagggcgac
ggagccaggacgagcatcatggtggacttcggggacggtcacgctctgacctactccaac
gtgagctccatagaggatggggtcaagcacgtctataaggctgtggggatctaccgtgtg
tccgctacaggagagaacaggctggggtcggagagcgtggtgctgtacctccacgtcaca
tgtcagctggagtatatccatctctccgctccctttgtggcggtgaagagtaaggaagtc
aacctcaccgctgtgctgtggccgagccaagtgggaacagtcacctacatctggtggttc
ggaaataacactgagccgataatcaccctggaagggagcgtggcgtgcacgttctcccgg
gaaggcgtcaacactgtcaccgtgcaggtgtccgctgggaatgccatcctgcaggaccgg
aaaaccatcgctgtccacgaatatttcaggtcacatctactagccttctcatctaacctg
gatgaccacaaccccgatgtggccgaatggagactggacgtcagcagagtcatcaagaac
tccatggtcaaagccacagggttgagcccggagctgctccttgtcaccgtcctaccaggg
ttgcccacggctgcagagtttttcctcctgccagacaaagagttaacagagggcaagcca
gagaagaactcagctcatttagaccagctctctgaaatcttgcttagcgccctcaaccaa
aacctggtccagttcacccttcggcctggggtccaggtcacagtatacactgcacatttg
tcagcagcgcccctagtggacacgagtgagaaccacagcggctcggccatgttgatgctg
ctgtcggttgtggttttgggtttggcgatatttgtcgtctacaaattcaaaaggaagatc
ccaggcctcaacgtctatgcgcagatgcagaacgaaaaagaacaagaaatgatcccgagt
ccagtaagtccgacggaaagcaccctggtgtccccgaacactccgatggagctggtgact
tctccggagcttatggacacagagttgaacacaaggcccatcggatgcatcaaacctcac
gcacatgtcaagttctcaacggaactccccacgtacatcaacatttaa
DBGET
integrated database retrieval system
