Oncorhynchus keta (chum salmon): 118389426
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Entry
118389426 CDS
T09424
Name
(RefSeq) xylosyltransferase 1 isoform X1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
oke00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
oke01100
Metabolic pathways
Module
oke_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
118389426
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
118389426
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oke01003
]
118389426
Enzymes [BR:
oke01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
118389426
Glycosyltransferases [BR:
oke01003
]
O-Glycan biosynthesis
Glycosaminoglycan
118389426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Methyltransf_33
Motif
Other DBs
NCBI-GeneID:
118389426
NCBI-ProteinID:
XP_052383797
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All DBs
Position
10:71891740..72092536
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AA seq
969 aa
AA seq
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MVGGSCARRLARRSRSALIAALTVLLVQTLIVWNFSSLDSGEERENGGGGASNMREKRDR
VGGGGYKGSSEYMKREVQLQHHPPQGKGTVRHIQQPDGYYSHRPKEKVRVDSNNENSVPK
DFENIDNSNFGARSQPQRQPPGGADSNKRRERLQEKAHAEQATWKDNAPILSRSSNEVLQ
YGRAVAQNGSLPVGPKAVGAGVGSRNHHSRSSQPQSQGQAQTYQQSQSHPQTQHRHQHPH
QTRKQATAAPLEVVYDQPPKCEISGKEAISALSRAKTKECRQQIAEVYCRHKEGQLMPEK
VTRYCPIEGKANANVAWEEDSSEGPPSAPVRIAFVLVVHGRASRQFQRLFKAIYHTSHYY
YIHIDQRSNYLHRQVQALASQYPNVRVTPWRMATIWGGASLLTMYLRSMADLITMTDWSW
DFFINLSAADYPIRTNSQLVAFLSKYRDMNFIKSHGRDNARFIRKQGLDRLFFECDTHMW
RLGDRKIPEGISVDGGSDWFLLNRPFVEYVINSQDDLVTNMKRFYTYTLLPAESFFHTVL
ENSAHCESMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPADFHRFQQTSRPTFF
ARKFEASVNQEIVNQLDGYLFGPMPQGTPGLQAYWESVFDEADGVATLSDTQLTLYHAFA
RLGLARAAASLQGDPKDDSCRYFPMGHPVSVHLYFQSDQFQGYLVQHHATNLATSKLETL
ETWVMPRKTYKVASPPSTFTRLQFTEIGTEWDAKERMFRNFGGLMGPMDETVGMQRWAKG
PNVTATVVWIDPTNVIAATYDILIDASAEYTHYRPPLNQPLRPGVWTIRVLHHWSPVAET
RFLISPLAYMKHQPIRQEDTLKLHNGPAKNSYMEQSFHGLNPVLNIPVHLGQVEQAKRNA
ALTGPTLEHWIDGLVGAMWEAGDVCSTSMTGGPGTSCPVMQTCAKTPWSSLSPDPKSQLV
PPHADGRIR
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggttggcggctcgtgcgctcgcaggttggcccgccgctcgcgttccgctttgatagcg
gctctcacggtgctgctggtccagacgctgatagtgtggaacttcagtagcctcgattcc
ggggaagaacgggaaaacggcggcggtggcgcgtcgaacatgagggagaagagagaccgg
gtcggcggtggtggctacaaaggcagcagcgagtatatgaagcgcgaggttcagctacag
caccatcctccacaagggaaaggaacggttcgtcacatacagcagccggatggctactat
tcccaccgccccaaggagaaagtcagagtggacagcaacaatgagaactctgtgcccaaa
gactttgagaacatagacaatagtaactttggcgcccgttcgcagccccagcgccagccc
ccagggggcgctgacagtaacaaacgcagggagaggctgcaggagaaggcccatgccgaa
caggcaacctggaaggataacgctccgattctcagccggagctccaacgaggtcctccag
tacggacgagccgtagcccagaatggctcacttcctgtgggcccgaaagcggttggagcc
ggggtgggctccaggaaccaccacagccgctcttcacagccacagagccagggtcaggct
cagacttaccaacagtcgcagtcccacccccagactcaacatagacaccaacacccgcat
caaaccaggaagcaggcgactgcggctccattggaggttgtttacgaccagccgcccaag
tgtgagatcagtgggaaggaagccatttcagctctgtccagagccaagaccaaggagtgc
cggcagcagatagctgaagtgtactgcagacacaaggaaggtcaactgatgcctgagaag
gtcacccgctattgtcccatagagggtaaggccaatgccaacgtggcgtgggaggaggac
tcgtcagagggcccaccgtcggcccccgtcaggatagccttcgtcctggtggtccacggc
agagcctcacgacagttccagagacttttcaaggccatctaccacacctcacactactac
tatatacatatagaccagcgctccaactaccttcacagacaggtgcaggccctggcctcc
cagtaccccaacgtgagggtgacgccctggaggatggcaaccatctggggtggtgccagc
ctgctcaccatgtacctccgcagcatggcagacctcatcaccatgaccgactggagctgg
gacttcttcattaacctcagcgctgcagactaccccatcagaaccaacagccagctggtg
gccttcctgtccaagtacagagacatgaacttcatcaagtcccacggcagagacaacgcc
aggtttatccgcaaacaaggtctggaccgacttttctttgagtgcgacacccacatgtgg
cgacttggtgaccgcaaaatcccagaaggcatttctgtggacggcggttctgattggttc
ctgctcaatcgtccgttcgtggagtacgttataaactcccaagacgacctggtcaccaac
atgaagcgcttctatacctacacactgctgcccgccgagtcgttcttccatacggtgctg
gagaacagtgctcactgtgagagcatggtggacaacaacctgcgcatcacgaactggaac
aggaagctgggctgtaagtgtcagtacaaacacatagtggactggtgcggctgctccccc
aatgactttaaacctgccgacttccaccgcttccagcaaacgtcccgccctacgttcttc
gccaggaagtttgaagccagtgttaaccaggagatagtgaaccaactggatggctacctg
tttggacccatgccccaggggacccctggcctccaggcctactgggagagtgtgtttgac
gaggcggatggggtcgcgaccctgagcgacacacagctcacactctaccatgcgtttgct
cgtctgggcctggccagggcggcagcatcgctgcaaggagatcctaaggatgacagctgc
aggtatttccccatgggccacccggtgtcagtgcatctctacttccagtcggaccagttc
caaggctacctggtccagcaccacgccactaatctggcaaccagcaagctggagaccctg
gagacctgggtgatgcccaggaagacctacaaggtggcttcccctcccagcaccttcacc
aggctgcagttcactgagatcggcacagagtgggatgccaaagagcgcatgttccgtaac
ttcggtggcctgatgggtcccatggacgagacagtcgggatgcagcgttgggccaagggc
cccaacgtgaccgccaccgtggtgtggatcgaccccaccaacgtcatcgctgccacctac
gatatcctgatcgacgccagcgcagagtacacccactacagaccccccctgaaccagcct
ctcaggcctggggtgtggaccatacgggtgttgcatcactggagccccgtggccgagacg
aggtttctgattagtccgctggcttatatgaagcatcagcctataagacaagaggacacg
ctgaagctccacaacggaccagccaagaacagttatatggagcagagcttccatggcctg
aaccccgtgctcaacatccctgtacacctgggccaggtggagcaggctaagcgcaacgcc
gccctgactggccccacgttggagcactggatagacggcctggtgggtgcgatgtgggag
gctggggacgtgtgttccacctccatgacagggggacctggaacatcctgccccgtcatg
cagacctgcgccaagaccccctggagctcgctcagcccggaccccaagtcccagctggtc
ccgccgcacgccgacgggcgcatcaggtag
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