Oncorhynchus keta (chum salmon): 118389530
Help
Entry
118389530 CDS
T09424
Symbol
optc
Name
(RefSeq) opticin
KO
K08127
epiphycan
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oke00535
]
118389530 (optc)
Proteoglycans [BR:
oke00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
118389530 (optc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_1
LRR_4
LRRNT
LRR_9
LRR_5
DUF3525
Motif
Other DBs
NCBI-GeneID:
118389530
NCBI-ProteinID:
XP_035635321
LinkDB
All DBs
Position
10:45324209..45351367
Genome browser
AA seq
331 aa
AA seq
DB search
MALLCVVVAFALTLLGPCPSVCAPQGGAEPDEQPYDLDDFDMNGETDWENLDLNGENYDY
EDLDQEIEVGTVAPPAPETPPPANMPPPEYEEEMTLFPRPTPPLAPVTLDFKGPGLFGPD
TGLGMPTCLLCVCISGSVYCDDANLEQIPPLPKDTTHFYGRFNSIRHVKNTDFINLNKLK
SIDLTGNQISGVDEDAFRPLSQLQDILLADNNLQALPELPPTLRYIDVRNNRLISNGLHT
DGFKEMSLLEFLYLSDNKLDYIPVPLPESLRVLHLQNNNIQNLHVDTFCNSHDRNYIRRS
LEDIRLDGNPVNINLFASSYICLPRLPIGSH
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggccctgctgtgtgtggttgtggcttttgccctgactctgctaggcccctgccccagt
gtgtgtgcccctcaggggggggcagagccagacgaacagccctatgacctggatgacttt
gatatgaatggagagacagactgggaaaacttggacctcaatggagaaaactacgactat
gaagacctagaccaagagatcgaggtggggacggtggccccccctgctcctgagacccct
cccccagccaacatgccccctcctgagtatgaggaggagatgaccctgttccccaggccg
acccctcccctggctccagtaactctggacttcaaaggaccaggcctgtttggacccgac
actggcctgggtatgcctacatgtttgctgtgtgtgtgcatcagtggaagtgtgtattgt
gatgatgctaacctggagcagattcctcctctgcctaaagataccacacacttctacgga
cgcttcaacagtatcagacacgtcaagaacactgacttcatcaacctcaacaagctgaag
agcatcgacttaacagggaaccagatctctggtgtggatgaagatgcgttccgcccccta
tcacagctccaggacatcctattggctgataacaacctgcaggcgttgccagaactccca
cccaccctcagatacattgatgtgcgcaacaacagactgatcagcaatggactacataca
gatgggtttaaggagatgagcctgctcgagttcctgtatctgtctgataacaagctggac
tacattcctgtcccactacctgagagcctccgagtactacacctgcagaacaacaacatc
cagaatcttcatgtggacacattctgtaacagccacgaccgtaactacatacgacgctcc
ctggaggacatcaggctggatggaaaccctgtcaacatcaacctgtttgcctcgtcctac
atctgcctgcctcgcctgcctatcgggagtcactga
DBGET
integrated database retrieval system
