Oncorhynchus keta (chum salmon): 118389821
Help
Entry
118389821 CDS
T09424
Name
(RefSeq) interferon regulatory factor 1 isoform X1
KO
K09444
interferon regulatory factor 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
118389821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118389821
Transcription factors [BR:
oke03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
118389821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
118389821
NCBI-ProteinID:
XP_035635581
LinkDB
All DBs
Position
11:complement(15574959..15579510)
Genome browser
AA seq
335 aa
AA seq
DB search
MPVSRMRMRPWLEDKIESNSISGLVWVDKDKKIFSIPWKHAARHGWDLNRDACLFKQWAM
HTGKFIQGETTPDPKTWKANFRCAMNSLPDIKEVKDKSINRGSGAVRVYKMLNVSTKPNN
KRSKAKDAKKNDKGLKIKTEEMDNSATHCLKDRNINTHLQEDRKIQENKVDSSDNLGETI
TAASYLGGSVNDPDVPDFITSVEIGPDSINYYSSFQVSPDHSTDYEDFNEETLIEIAQHW
EQLEQLELPGSVNSKGFLSNEVATVESYNTAESNHSPESQWSDNSGSEIELRLYTELSPG
LPMAEDLVSYADHWALNNTLNNNTTSYLQQISCPL
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtctaggatgagaatgaggccttggctggaggataagattgagtccaactcc
atcagtggattggtgtgggtggacaaggacaagaagatattctccatcccatggaagcat
gctgcacgtcatggatgggacctgaacagggatgcctgtctattcaagcaatgggccatg
cacacagggaaattcatacaaggcgagactacaccagaccctaagacatggaaggctaat
ttccgctgtgcaatgaactcccttcctgacatcaaggaggtgaaagacaagagcatcaac
agagggtcaggagcggtgcgtgtttacaaaatgctgaacgtcagcacaaagccaaataac
aagaggtcaaaagcaaaggatgcaaagaaaaatgacaaggggttaaagatcaagacagag
gaaatggacaacagtgcaacccattgcctcaaggatcgcaacatcaacacacacctccag
gaggacagaaagatacaggagaacaaagtcgacagctcagacaacctaggggagaccatc
acagcagcgtcatatcttggtggctctgtcaatgaccctgatgttccagactttatcacc
tctgtggaaataggaccagacagcatcaactactactcgtctttccaagtgtcaccggat
cactccacagactatgaagatttcaacgaagaaacacttattgagattgcacagcattgg
gagcaattggagcaattggagctgccaggcagtgtaaacagcaaggggttcctgagcaat
gaagtagctacagtagagtcatacaacactgcagagtctaaccacagtccagagagccaa
tggagtgataactcagggtcggaaatagagctgcggttatacacagaactgagcccaggc
ctgccaatggctgaagatctcgtctcttacgccgaccattgggctctgaacaacacactg
aacaacaacacgaccagttatctccaacagatctcttgcccactttga
DBGET
integrated database retrieval system
