KEGG   Oncorhynchus keta (chum salmon): 118389939
Entry
118389939         CDS       T09424                                 
Name
(RefSeq) serine/arginine-rich splicing factor 7-like isoform X1
  KO
K12896  serine/arginine-rich splicing factor 7
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03040  Spliceosome
oke05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118389939
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    118389939
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oke03041]
    118389939
Spliceosome [BR:oke03041]
 Common components
  Common spliceosomal components
   SR proteins
    118389939
SSDB
Motif
Pfam: RRM_1 zf-CCHC zf-CCHC_3 RRM_5 DUF3432
Other DBs
NCBI-GeneID: 118389939
NCBI-ProteinID: XP_035635844
LinkDB
Position
11:22864809..22879151
AA seq 302 aa
MSYSSSRSSSRNTDCKVYVGDLGNGAAKGELERAFSYYGPLRSVWVARNPPGFAFVEYED
PRDAEDATKGMDGKVLCGARIRVELSTGMSRKSRHDRPSRRHFDPNDRCYQCGENGHYAY
DCYRFSKRGGGRRSRSRSRSRSRGRRYRSRSRSNGRDRRSGSPARSKSRSPVRRSSRSPV
RRSSRSPVRRSSRSPVRRSSRSPVRRSSRSPVRRSSRSPVRRSSRSPVRRSSRSPVRRSS
RSPVRRAASRSRSRSRSRSVSHPRARSVSRSRSRSKSRSATTKRDSRSRSPSQRKSPTPD
AD
NT seq 909 nt   +upstreamnt  +downstreamnt
atgtcctactcgtcatcacgaagctcctcgcgcaacactgactgcaaggtgtatgtaggt
gacctaggcaacggtgctgccaagggggagttggaacgggcgttcagctactatggacct
ttgcgcagtgtctgggtggccaggaacccacctggttttgcctttgtcgagtacgaagat
cccagagatgctgaggatgcgacaaagggcatggacggcaaagtgctctgtggtgcccgc
ataagagtggagttgtcaacgggtatgtctcgcaagtcgcgccacgaccgccccagccgc
cggcacttcgaccccaacgaccgctgctaccaatgtggcgagaatggccattatgcatat
gactgctatcgctttagcaagaggggtggtggccgccgcagcaggtcccgctcacggtca
aggtccaggggaaggcgttaccgctcacgcagccgaagcaacggccgcgaccgtagatct
gggtccccagcacgttccaagtccagaagtccagtgcgcaggtcgtccagaagtccagtg
cgcaggtcatccagaagtccagtgcgcaggtcgtccagaagtccagtgcgcaggtcgtcc
agaagtccagtgcgcaggtcgtccagaagtccagtgcgcaggtcgtccagaagtccagtg
cgcaggtcgtccagaagtccagtgcgcaggtcgtccagaagtccagtgcgcaggtcgtcc
agaagtccagtgcgcagagcagcaagtcgctcccgatctcgctcccgctcccggtccgtg
tcccaccccagggcgcgcagcgtctccagatctcgctcccggtccaagtcccgctcagcc
accaccaagagggacagtcgatccaggtctccgagccagaggaaaagccccactcctgat
gccgactga

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