Oncorhynchus keta (chum salmon): 118389947
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Entry
118389947 CDS
T09424
Name
(RefSeq) HMG box transcription factor BBX-like isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118389947
Transcription factors [BR:
oke03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
118389947
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Gene cluster
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
118389947
NCBI-ProteinID:
XP_035635861
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Position
11:23055341..23100972
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AA seq
881 aa
AA seq
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MKGGGRGKEPPVEVSCKRPKRKCLQWHPLLSKKALDFSEEEEEDEEELEKKPLLVRETRG
PKVPCGGPPEGEEDSSEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAV
LEPKEKQKYTDMAKEYKDAFMKANPGYKWCPATNKPVKSPCHTVSNTCNKVWSFPSNSPK
GCATAKKLPKTDSTPQLNFAMADPTKMGGLSMLLLAGEHALTAREISSSSSQSGATDVTK
YPDKSSLFQLAEISSSTRQPSLMDTAGKGKPLSLGDQADMWSGTSQQGKPDVPTANVKSP
LFQLAEQISSDSSQSTAPEGKQCGQSALFQLAEMCLASEAGKMETQDDTCTPHIKTETVV
EEVGDNTHDLPLSFPPSSSMPTDASLLLLRGQAAIIKRKKDASTREPPKVVDKDKSPGPG
SPKKTLKKRPSSESELESLFYTIEAVAKGAWGDAREDMPKKKARSAAVTILVESSSPKKR
AKPKAKRPLKAKEDERNVKDKEDDGRTELPLTVGTVVNPASPKIEAKEANISSSTEEHTS
PPSPPHIKHKVGERELEANAEGCGSRKSERSCKGALYKTLVSEGMLTSLRANVDRGKRGS
FRSASDGGWTDETWAFSQMGPSNFKKLKKSKSKDETAPGLGKLEEEFEKKFNSLPQYSPL
TFDKKSTVVTKKKTDISTTPAEQPLKPATGPSPSQKNTLFHKIVSNYKEKKKKPNTLDKD
IAMCSDSPMLDSAAKATKAKPSPAPCATATLNPEAMGTSPSVPVGSQKRKARKSKITHLV
RSADGRVSPAEEDKARDLTPEQDDKPLSQDTLCNETGCYNASKQEEADRSSAPEDLPAFF
SLAALAEVAAMENIHRGQHVIGDSQKKDMAKTPLLISCADQ
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtggaggaaggggtaaggagcctccggtggaggtgagctgcaagcggcccaag
cgcaagtgtctacaatggcacccgctactctccaagaaggccctggacttttcggaggag
gaagaggaggacgaagaagaactagagaagaagccattgttggttagggagacccggggg
ccgaaggtgccatgcggggggcccccggagggggaagaggactcttcagagcagcgggct
cgccggcccatgaatgccttcctgcttttctgcaagcgccaccgatcgctggtgaggcag
gaacaccctcgactggacaaccgcggtgccaccaagatcctggctgattggtgggccgtg
ctggagcccaaagagaaacagaagtacactgacatggccaaggagtacaaggatgccttc
atgaaggctaacccgggctacaagtggtgccctgccaccaacaagccagtcaagagcccc
tgccacactgtcagcaacacctgcaataaagtgtggtccttcccttccaactcccctaag
ggctgtgccactgccaagaaactgcccaagactgacagcacaccacagcttaatttcgcc
atggcagatcccacgaagatgggtggcctaagcatgctactgttggctggggagcatgcc
cttactgccagagagatttcctccagctcatcacaatctggagccacagatgtcactaag
taccctgataaatcctccctattccaacttgcggagatctcttccagcacgcgtcagccg
agtttaatggacacagctggcaaagggaagcccttgagtttgggggaccaggctgacatg
tggtctggaacctcacagcagggaaagcctgacgtacccactgccaatgtcaagtcccct
ctttttcaactggcagagcagatctcctctgattcaagccagtcgactgcaccagaggga
aagcagtgtggccagtccgctctcttccagcttgctgagatgtgcttggcctccgaggca
gggaagatggaaacacaggatgatacctgcaccccacacatcaaaactgagactgtggta
gaggaggttggggacaacacccatgatcttcctctctcctttcccccgtcttcctccatg
ccgactgatgctagtctcctgctgctcagaggccaagcagccataatcaaaaggaagaaa
gacgccagcaccagagagccgcccaaagtggtggacaaagacaagagccctggtcccggc
tcacccaaaaagaccctcaagaagcgaccttcatccgagtcagagttggagagcctcttc
tacactatcgaagcagtggctaaaggggcctggggcgatgccagggaggatatgcccaag
aagaaggctcgctccgccgcagttaccattctggtagagtccagctcacccaaaaagagg
gccaagcccaaagccaagaggcccctaaaggctaaggaagatgagagaaatgtgaaggac
aaagaggacgacggacgcacagagcttccattgacagtggggacggtggtgaatccagca
agccccaagatagaggctaaggaggccaatattagcagcagcacggaggagcacacctcc
cctcccagccccccgcacatcaagcacaaagtcggggagagggaactggaggccaacgca
gaggggtgtggctccagaaagtctgagagaagctgcaagggggcgctgtacaagaccctg
gtgtcggaagggatgctgacctcactgagggccaacgtggacagaggcaaaagaggttct
tttcgaagtgcatctgatggaggctggactgacgagacctgggctttctcacagatggga
cccagtaatttcaagaagcttaagaagtccaaatccaaagacgagaccgcgccaggtttg
gggaaactagaggaggagtttgagaagaagttcaacagcctgccgcagtacagccctctg
acattcgacaaaaagagcaccgtcgtcaccaagaagaaaactgacattagcaccacaccg
gcggaacaacctctgaaacctgccacgggtccatctccatctcagaaaaatactttattc
cacaagattgttagcaattacaaggagaaaaagaagaagcccaatactttggataaagac
atagcgatgtgtagtgactcccccatgttagactcggctgccaaggccaccaaggcaaag
ccgagcccagccccctgtgccaccgccacgctgaacccagaagccatgggaactagccct
agcgtgcctgtgggtagccagaaaaggaaggccaggaagagcaagatcacccacctggtg
cgctcggccgacggcagggtatccccagccgaagaggacaaagccagggacctgaccccg
gagcaggatgacaagccattatcccaagatactttatgcaatgaaacagggtgttacaat
gcatccaagcaagaggaagcggacaggagcagtgcacctgaagacctgcctgccttcttt
agcctggctgcccttgcagaggtggcagccatggagaacattcacagaggccagcatgtg
attggtgacagccagaagaaggacatggccaagacccctttgctcatctcctgcgctgac
caatga
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