Oncorhynchus keta (chum salmon): 118389976
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Entry
118389976 CDS
T09424
Name
(RefSeq) cell adhesion molecule 1-like isoform X2
KO
K06781
cell adhesion molecule 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118389976
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118389976
Cell adhesion molecules [BR:
oke04515
]
Immunoglobulin superfamily
Nectin family
118389976
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
C1-set
C2-set_3
Adhes-Ig_like
KOW2_Spt5
Syndecan
Motif
Other DBs
NCBI-GeneID:
118389976
NCBI-ProteinID:
XP_035635932
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Position
11:complement(25849040..26335561)
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AA seq
440 aa
AA seq
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MAITGNGSLATLLFLFVIPAALHKGAAQYPVQSQNLVTDNVEVMEGDVAVISCRVKNNDD
SVIQLLNPNRQTIYFRDVRPLKDARFQLVNFSDNELRVSLSNVSLSDEGRYVCQLYTDPP
QEAYADITVLIPPGNPIIESREGQVIEGNETEMTCTAMGSKPAATIRWMKGDKELQGISK
VEETYDHMFTVTSQLRFIVTKEDDGVPVVCIVDHPAVKDFQALTYLVVHYKPEVKIIVEF
PDGLPREGQNMELSCQAKGKPHPQQINWVKVDDDLPSHALITGPDLYIENLNKTYNGTYR
CFAANSVGESYDDYILYVYDAPTTTPIPTTATTTIPTTTISLPEATADTTPSAEPAAHDS
RAGEGAPRAVDHAVIGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADT
AIINAEGGHNNSDEKKEYYI
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcacaggcaacggatctctcgctacacttctctttttgttcgtgattccagca
gctcttcacaaaggagctgctcagtacccagtccagagtcagaacctggtgacagacaat
gtggaggtgatggagggtgacgtggccgtcatcagctgcagggtgaagaacaacgacgat
tctgtcatccagctcctcaaccccaacagacagaccatctacttcagagacgtccgaccc
ctgaaagatgctcgcttccagctggtcaacttctcagacaatgagctgcgggtgtctcta
tccaatgtgagcctgtcggatgaggggagatacgtgtgccagctctacacggacccccca
caggaggcctatgcagacatcactgtgctgatccctccaggcaacccaatcatcgagtcc
cgggaggggcaggtgattgagggcaacgagacagagatgacctgcaccgctatgggcagc
aagcccgccgccacaatcagatggatgaagggagacaaagagctccaaggcatatccaag
gtggaggagacatatgaccacatgtttactgtgaccagccagctgaggttcatcgtcact
aaggaggacgacggcgtgcccgtggtgtgcatcgtggaccacccagccgtcaaagacttc
caagccctgacgtacctggtggtgcattataaaccggaggtgaagatcatagtggagttt
cctgatgggctgccaagggagggacagaacatggagctgtcatgccaggccaaaggcaaa
ccccatccccagcagatcaactgggtgaaggtggacgatgaccttccctcacacgccctc
atcaccggcccggacctgtacatcgagaacctcaacaagacctacaatggcacctaccgc
tgcttcgctgccaactcagtgggcgagtcgtatgatgactacatcctctacgtctacgat
gcccccaccactacccctatacccactacagctaccaccacaattcccaccaccaccatc
tctctccctgaagccactgcagatactacgcccagcgctgaacccgcagctcacgattct
agagctggagagggagcaccaagagcggtcgaccatgcagtcatcggaggagtggtggct
gtggttgtctttgccatgctctgtctactcatcattttgggacggtactttgcaagacac
aaaggtacctacttcacgcatgaagctaaaggagccgacgatgcagcagatgcagataca
gccattatcaacgcagaggggggccacaacaattcggacgagaaaaaggagtactacata
tag
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