Oncorhynchus keta (chum salmon): 118389984
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Entry
118389984 CDS
T09424
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03030
DNA replication
oke03410
Base excision repair
oke03420
Nucleotide excision repair
oke03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118389984 (rfc2)
03410 Base excision repair
118389984 (rfc2)
03420 Nucleotide excision repair
118389984 (rfc2)
03430 Mismatch repair
118389984 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oke03032
]
118389984 (rfc2)
03036 Chromosome and associated proteins [BR:
oke03036
]
118389984 (rfc2)
03400 DNA repair and recombination proteins [BR:
oke03400
]
118389984 (rfc2)
DNA replication proteins [BR:
oke03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
118389984 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
118389984 (rfc2)
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
118389984 (rfc2)
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
118389984 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
118389984 (rfc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_22
nSTAND_NTPase5
AAA_14
AAA_16
Mg_chelatase
Viral_helicase1
AAA_11
RCF1-5-like_lid
Rad17
RuvB_N
AAA_19
MipZ
nSTAND3
AAA_24
AAA_assoc_2
AAA_18
ABC_tran
AAA_5
AAA_28
AAA_23
AAA_25
AAA_30
SLFN-g3_helicase
MeaB
NTPase_1
RNA_helicase
DNAX_ATPase_lid
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
118389984
NCBI-ProteinID:
XP_035635963
LinkDB
All DBs
Position
11:complement(27567986..27574377)
Genome browser
AA seq
353 aa
AA seq
DB search
MDVAMNEVDSEQIQTEVQLKKDESPAKLSSSGYELPWVEKYRPLKLNEIVGNEETVSRLE
VFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPI
QSRCAVLRYTKLRDEQIMMRLLEVVERENLVTSNDGLEAIIFTAQGDMRQALNNLQSTNS
GFGYINSENVFKVCDEPHPLLVKSMLEHCVNANIDEAYKIIEQLWALGYSPEDIIGNIFR
VCKTFQMPEYLKLEFIKEIGYTHMKVAEGVNSLLQMAGLLGRLCSKTATPDTS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggcgatgaatgaggtagattctgaacaaattcaaacagaagttcaactgaag
aaagatgagtcccctgcgaagttgtctagtagtggatatgagctgccatgggttgaaaaa
tacagacccttgaagttgaatgaaatagtaggcaacgaggagactgttagcagattggag
gtgtttgccagagagggaaatgtgccgaacatcattattgcaggtccccccggtacagga
aagaccaccagtattctgtgtttggcgcgagctcttctgggcccagccatgaaagatgct
gtcctggaactgaacgcctccaatgacagaggcatcgatgtagttcgaaacaagatcaag
atgtttgcccagcagaaagtcaccctccctaaagggagacacaagatcatcatcctggat
gaggctgacagtatgacagacggagcccagcaggccttgaggaggaccatggagatatac
tctaaaaccacacgcttcgctttggcatgcaacgcctccgacaagatcattgagcccatc
cagtcacgttgtgcagtcctgcgctacaccaagctgagggacgagcagatcatgatgcgt
ctgctggaggtggtggagagggagaacctggtcaccagcaacgacggcctggaggccatc
atcttcaccgcccagggagacatgagacaggcgctgaataacctacagtccacaaactcc
gggtttggctacattaacagtgagaatgtgttcaaggtgtgtgatgagccacatcccctg
ttggtgaaaagcatgctcgaacactgtgtcaatgcaaacattgatgaggcttacaagatt
attgagcagctgtgggccctgggttactcccctgaggacatcatcggtaacatcttcaga
gtgtgtaagaccttccagatgccggagtatctcaagctggagttcataaaggagataggc
tacacccacatgaaggtggcagagggcgtgaactccctgctgcagatggcaggcctcctg
ggtcgactgtgcagcaagacggccaccccggataccagctaa
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integrated database retrieval system