Oncorhynchus keta (chum salmon): 118390068
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Entry
118390068 CDS
T09424
Symbol
trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118390068 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118390068 (trpv1)
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118390068 (trpv1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
118390068
NCBI-ProteinID:
XP_035636139
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Position
11:complement(31683532..31704907)
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AA seq
804 aa
AA seq
DB search
MSKSKGPEYPSFSLETDDRTDDERAQSRQVKKPDRLVSALGLGSSGGPKAPMDSDYQDEL
EEAAPKIRFNLNFDKEVRCLEENKEDRDSKRFDIKRLFEAVSTGDVMKLEGLHQYLHQSM
KKLSNTEYQSYGKNVLLKALLNLRNGRNNTIEYLLDISEKMGDIKELVNAAYTDSYYKGQ
TALHIAIERRSTYFVELLIKKGANVHAKACGKFFQLNDGPSFYFGELPLSLAACTNQPEV
VDFLLENDYQRVDVRESDSLGNMVLHALVVLADNTPENTDFITSMYDHILTTAARLHPKW
RLEDIENNQGLTTIKLAAKTGKIGLFKHMMHREFQERETRNLSRKFTEWIYGPVHSSLYD
LDSLDSYEKNSVLEIIVYSSDIPNRHEMLQIEPLNRLLEEKWDKFAARMFFLNFMVYLVY
LSVFTAVAYYRKKGTPPFTLEHTRQEYLRLAGQLFITVGACYFFIRGILDLKRKRPSLDT
LLIDGYSEILFFLQAIFFLASSVLYCCGREEYLGFFVLCLALSWVNLLYFSRGYRHMGIY
SVMIQKMILCDILRFLFVYVTFLFGFSAAVVTLLMEPDLPANNTAQPINSTDGRGRTFFL
PTEDSCIKPTFRNISHTIMELFKFTIGMGDLEFTEGYQYKEVFYMLLISYIVLTYILLLN
MLIALMSRTVEKMSLESTSIWKLQRALTILDLERSLPRCLRRRLRSGVDKDLGTRAGEKD
RRWCFRVEEVNWNKWNTNLGIINEDPGSGDTARLSPTHSSRTLGREKSWRGFLGNVSRRQ
HTQPQQQTQVESTEMSSLSPLNHV
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcaaagggcccagagtacccttccttctctctggagacggatgacaggaca
gatgatgagagggcacagagcagacaggtgaagaagcctgaccggctggtgtctgcccta
ggcttaggcagttcgggggggcccaaagcccccatggactcagactaccaggatgagctg
gaggaggccgctcccaagattagattcaatctcaattttgacaaagaagtacgatgtttg
gaggagaacaaagaggacagggacagcaagaggtttgacatcaagaggctgtttgaggcc
gtgtccactggtgatgtcatgaagctggaggggctgcatcagtacttgcatcagtccatg
aaaaagctctccaacactgagtatcaatcgtatggtaaaaacgtcctgctgaaggctcta
ctgaatctgagaaatggcagaaataacacaattgaatatctccttgacatctcagagaag
atgggggacatcaaagaattagtaaatgctgcttacacagacagctattacaaaggtcaa
acagcccttcatattgccattgagagaaggagcacctattttgttgagctattgatcaag
aaaggagcaaacgtccatgccaaagcctgtgggaaattcttccagctcaatgatggaccc
agcttctactttggtgagctacctctgtccctggctgcgtgcaccaaccagcctgaggtg
gtggactttctgctggagaatgactaccagagagtggatgtgagggagagtgattctctg
ggtaacatggtgttgcatgccctggtggtgttggctgataacacaccagagaacactgac
ttcatcacctctatgtacgaccacatcctcacaacagctgcccgcctccaccccaaatgg
aggctggaggacatcgagaacaaccagggcctgacgactataaaactggctgccaagact
ggcaagatcgggctgtttaagcacatgatgcatcgtgagttccaggagagggagaccaga
aacctgtcgcgtaaattcactgagtggatttacggacccgtccactcctccttgtatgac
ctggactcactggactcctacgagaagaactctgtcctggagatcatcgtttacagcagt
gacattcctaatcgccatgagatgctgcagattgagcctctgaacaggctactggaggag
aagtgggacaagtttgctgctcggatgtttttcttaaacttcatggtttacctggtttac
ctctccgtcttcactgctgtcgcctactacaggaagaagggaacgccaccttttactctg
gaacataccagacaggagtacctgcgactcgccggtcagctttttataactgtgggagcc
tgctatttcttcataagagggatattagacttgaagaggaaacgtccaagcctggacact
ttgctgattgacggatacagtgaaatccttttttttctgcaggcgatcttcttcctggcc
tcctcagtgctgtactgctgtggtagggaggagtacctgggtttttttgtgctgtgtctg
gctctcagctgggtcaacctgctctacttctccagaggatacagacacatgggcatctac
agtgtcatgatacagaagatgatcctatgtgatatcttgcgctttctctttgtctacgtt
accttcctctttgggttttcagcagcggtggtcactttgttgatggaacctgatttgcca
gccaataatacagcacagccaataaacagtacagatggaagaggtcgtacctttttcctt
cccactgaggattcatgtataaaacccaccttcaggaacatctctcacactatcatggag
ctgttcaagttcaccatcggcatgggagacctggagttcacagaggggtaccagtacaag
gaagtgttttacatgctgctaatctcctacatcgtgctcacctacatcctgctgctcaac
atgctcatcgccctcatgagccgcactgtggagaagatgtccctggagagcaccagcatc
tggaaactacagcgggccctcaccatcctggatctggaaaggagcctgcctcgctgcttg
agaaggaggcttcgttctggggtggacaaggacctggggaccagggctggagagaaagac
cgccgatggtgcttcagagtggaggaagtcaactggaacaaatggaacaccaacctggga
ataatcaatgaggatccagggagcggagatacggccaggctgtcccctacacacagcagc
agaacgctaggcagagagaagagctggcgggggttcctgggaaatgtcagtcgaagacaa
catacacagcctcagcaacaaacacaagtagagagcacagagatgtcctctctgtctcct
ctcaaccatgtctga
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