Oncorhynchus keta (chum salmon): 118390072
Help
Entry
118390072 CDS
T09424
Name
(RefSeq) nuclear receptor corepressor 1-like isoform X2
KO
K04650
nuclear receptor co-repressor 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118390072
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oke01009
]
118390072
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118390072
Protein phosphatases and associated proteins [BR:
oke01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118390072
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
118390072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
118390072
NCBI-ProteinID:
XP_035636150
LinkDB
All DBs
Position
11:31777899..31896551
Genome browser
AA seq
2513 aa
AA seq
DB search
MSSSSGYPPTQGSFSSEQSRYPSHSVQYTFSTTRHQQEFTVPDYRGHLQDQQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSVTSQQQADGHEALEAKRPRMETVSEAHFTRGALPGGI
ILPLQSHQVQDSLRTNVGEVNKETQFSGMKAESQAPGGLHHVGEVPDSSPSRLSKEELIQ
SMDRVDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVTPPPIPQEHNKHRSIVQIIY
DENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHAR
KQREQNICQRYDQLMEAWEKKVERMENNPRRKAKDSRTREYYERQFPEIRKQREQQERFQ
RVGQRGTGMSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDTEQRRVRFINM
NGLTDDPMKVYKARQFMNVWTEHEKGIFKEKFVQHPKNFGLIASYLERKCVSDCVLYYYL
TKKNQNYKTLVRRNYGRRRGRNHQITRSSQEEKSDDKPEEDKLEKSEKKEDEHNKEEEEK
DEKEDSRDIGKDKDKCDGGEDEDGKEQSTPRGRKTANSQGRRKGRITTRSMANEAASVAA
EEPLPPEPLLPSEPPQPSKPEPTIQKAVREPTKSAPGEPPMDPNRGAGGAAAANGETGET
SRWTEEEMEVAKKGLVEHGRNWPAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQD
TRRARGDRDPSQSESMASADDDQNPEDSDGGDNSSDTESAPSPSDPSKAGGDSQRGDGAG
GSENQWSNKVQASNGRIQEPSYGELRVKLEKSPEGDAREPGSQEDGERARVAYEGHGHPK
SEPQDVDMKPGGAGEVQVKVEPDSAKEKGEPEKQREGHHSDNDSSATCSADEDVDAEPER
QRIFSSMDKPSLLSPPGSVLMSTAKQAHLNMQQLQQRAATIPPMVSHYSNPHFSMIRYAH
SARQAHGGRQQGESMSCLDQPPCQVVPFGPGGISIGAPLSGFAMFQHQITAVHESAHAEE
KQRQDQADPERSRQPTNCPGFTNHSPTIVDREGKPFPYMPYDMKMALEQEAQSGRPGSPY
GLSPRDMSKASPQPNDPNASRYSVPPVLQPAPNQVVQSLPDGVRVTFSRHSRPANIPSPP
PLIPTSKPTDKPSFIQGGSISQGTPGTYLPSHAVYGGPEGAKSSVGSISLGLPRQQDPTK
PVSYIKQEQCSPRGQSEGLLSRTQYEGVVRGGPMDGGISRGNPARGSITQGTPALTGSSI
AADLLKGTITKLPTEDLSSPEKAREQLAKGHVIYEGKSGHILSYDAIKNPREATRSPRTG
HELKRSYDMMEVARGHPGREGAPFEGLISRALPRDSPHGESKERPMMTGSIMQGTPRTSA
EAYEESMKYGKQIKRESPPIRSFEGGIGKGKPYEGVNTIKEMGRSIHEIPRQEKPGQDPR
KTPDMAANIRASMEGSISQGHPLSQSAIKHNVKSLITSPSRLPHGHTMPPLEAMERAKYE
ESKAAAEQRARHTSVVNSATSVLRSTHQEQGKSQLSPGMYQDADSRRTPVNYSTSSMSRG
SPMLGRGQEGSGKPASHDRKSTMTPTQRDSVPAKSPVSGGDPNHPMASHSPFDPHHRPMA
PGEPRFHLPPHLDPALFHRAVLDPAAYMFPRQPSPTGYHNTYQLYTMENTRQTILNDYIT
SQQMQVIPRPDVARGLSPREQQPIALSYPPGARGIIDLAQMPPTILLPHPGGTGTPTLDR
ITYIPGAQPPFPPRPFNQASISPGHQAHLAATAAANQERERERERDREHREKEREREHRE
REQEQRQRERERAVAAAVANDYMRGGPGQPDRPGSRGYLRSPSPSMRSQEAQQQRPSIFQ
GANSKGVITPLMPAAAAAQAGARYSTAADALAALVDAAASAPQMDVNKGKDSSKHDRDDD
DDMSLSSSVARRQHEQQQQEADRRSMQSPYGPMSLPGGKLHPGYAEGPSGPQGSKDKGPP
SKSRIEEELRTRGKTTITAANFIDVIITSQIASDKDSRERGSQGSDSSSSLSSSRYEIPS
GGAIDVISPANSPAQSQQQQDDRDRADRDRADRDRADRERADRDRADRDRAAQAAAQAGM
RPFDMIRYRQSAESQQPPSSQADGGYSQSQQVPKTHRVMTLADHISHIITQDFARNQDPP
QSSTTISSSATTTFQSAQLPVSIGGRAKVPSRYSPENHQRPTPSRVSPDNAPDKPRARPG
KSPDRGGRGAIESYEPISPPQSYQDKQQEAREQQQPQRRDADQPEMRGDSRSPGSVSYLP
SFFTRLENTSPMVKSKKQEIIRKLNSSGVSDSDVGNAQPGTEIFNLPAVTSSSSVNPRNH
SFSDPASNLGLEDIIRKALMGNLEERPEEHQGGPQPSSNTPSNEARQEANPSPSMGKQKL
QSKANSRKSKSPNPGQAYTAAERPSSVSSVHSEGDYHQQPPAWSWEDRPSSTGSMQFPYN
PLTMRMLSSTPPTSIQAQQPPPGGPLGPQQQQRVWEREPLLSEQYETLSDSDD
NT seq
7542 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctatccccctacccagggcagcttcagcagtgagcagagccgc
tacccatcacactctgtccagtacaccttcagcaccacacgccaccaacaggagttcacc
gtcccggactaccgaggtcacctgcaggaccagcaaggtcgacgaaggccttccttgctt
tcggaattccaccctggaactgagaggcctccagagagacgtcatggctacgagcagcag
ttccacagtgtcacctcccagcagcaggctgacggccacgaggctctggaggccaaacgg
ccccgcatggagactgtctcggaggcccacttcacccgcggtgccctgcccgggggaatc
attttacccctgcagtcccaccaggtccaggacagcctcagaaccaacgtaggggaggtc
aataaggagacccagttcagtggcatgaaagctgagtcccaggctccaggagggctgcat
catgtgggggaggtgcctgacagctcgccctccagattgtccaaggaggagctgatccag
agcatggaccgtgtggacagagagatcgctaaagtggagcagcagatcttcaagctgaag
aagaagcagcaacaactggaggaggaagcggcgaagccagtggagccagaaaagccagtg
acccctccccccataccacaggaacacaacaagcaccgcagcattgtccagattatctat
gacgagaacaggaaaaaagctgaagaggcccataagatatttgaaggtcttggtcctaag
gttgaactgcccctgtataatcagccatcggatacaaaagtttaccatgacaacataaag
actaatcaagtgatgaggaagaaactgattctgtttttcaagagaaggaaccatgctcgt
aaacaaagggaacagaacatctgccagcgctacgaccagctaatggaggcctgggagaag
aaggtggagcggatggagaacaacccgcgtcgcaaggccaaagatagccgcaccagagag
tactatgagagacagttccccgagatacgcaagcagagagagcagcaggagcgcttccag
agggttggtcagagaggaactggaatgtctgcgaccattgccagaagcgagcatgagatt
tctgaaatcatcgatggcctttctgaacaggagaataacgagaagcagatgagacagctg
tccgtcatcccacccatgatgtacgacaccgagcagaggcgagtcaggttcatcaacatg
aacggcctgacggatgaccccatgaaggtgtacaaggctcggcagttcatgaatgtgtgg
accgaacacgagaagggtatcttcaaagaaaagtttgttcagcacccaaaaaatttcggc
ctcattgcttcttatctagagagaaagtgtgtgtccgattgtgtcctgtactactacttg
accaagaagaaccagaactacaagacactggtgagacgcaactacggcagacgtcgaggg
agaaatcaccaaataacacgatcctcacaagaagaaaagtcagacgataaacctgaagag
gacaagttggagaagtcagagaaaaaagaggacgagcataataaggaagaggaagagaaa
gatgaaaaggaggactccagggacatcggaaaagacaaagacaagtgtgacggtggggag
gacgaggacggtaaggagcagagcacgccacgtggcaggaagaccgccaacagccagggc
cggcgcaagggaaggatcaccacgcgctccatggccaatgaggctgcctctgtggcggcc
gaggagccactgccacccgagcctctcttgccctccgagccccctcagccttccaaacca
gagcctactatccagaaggctgtgagagagcccaccaaatctgcaccgggtgagcccccc
atggaccctaacagaggagcaggaggagctgctgctgcgaacggcgaaaccggagagact
tctcgctggaccgaggaggagatggaggttgccaaaaaagggcttgtcgagcacgggcgc
aactggccagccattgccaagatggtgggcaccaagagcgaggctcagtgcaagaacttc
tacttcaactacaagagacggcacaacctggacaacttgctccagcagcacaagcaggac
acacggcgggcacggggagatcgagacccgtctcagagcgagagcatggcttcagctgac
gacgaccaaaacccagaggatagtgatggtggagataacagctcagacacagagagcgcc
ccgtccccgtcggacccctccaaggccggaggggattcccagaggggagacggagctgga
gggtcagagaaccagtggtccaacaaggtccaggctagcaatgggaggatccaggagccc
tcctacggggaactgagggtcaagttggagaagagcccagagggagatgccagagagcct
ggctctcaggaggatggagagagggcccgggtggcctacgagggccatgggcaccccaag
agtgagccccaggatgtggacatgaagcctgggggggccggggaggtgcaggtgaaggtg
gagcctgactctgccaaggagaagggggagccagagaagcagagggaggggcaccactca
gacaacgactccagtgccacctgcagcgccgacgaagatgtagacgctgagcccgagaga
cagaggattttttctagtatggacaagccttcgttgctcagccctcccggctcagtgctg
atgtccacggccaagcaggcccacctcaacatgcagcagctccagcagcgcgccgctacc
atcccgcccatggtcagtcactatagcaacccacacttttctatgatcagatatgcccat
tcggcgaggcaggcacacggaggcaggcagcagggtgaaagcatgtcttgtttagaccaa
cctccctgtcaagtggttccttttggtcctggtggaatttccataggagcccccctcagc
ggttttgccatgttccagcaccagatcacggctgtgcacgagtcagcccacgccgaggag
aaacagaggcaggaccaggctgaccccgagcgcagcagacaacccaccaactgccctggc
ttcaccaaccacagccccaccatagtggacagggagggtaagcccttcccctacatgcct
tatgatatgaagatggctctggagcaggaggcccagtctggtcggccaggctctccctac
gggctctctcccagggacatgagcaaggcctctcctcagcccaatgaccccaacgcctcc
cgctacagcgtgcctccagtgctccagccagctcccaaccaggtggtccagagcctgcct
gatggagtccgtgtgactttctccagacacagccgacccgccaacattccatctcctcct
ccattaattccaacctccaaacccacagacaagccctcctttatccagggtggctccatc
tcccaggggactcctggtacgtacctaccgtctcatgctgtctacggtggcccagagggg
gcaaagagttctgtgggctccatatctctgggcctgcccaggcagcaggaccccaccaag
cctgtgtcctacattaagcaggagcagtgttctccgcgtggccagtctgagggactcctc
tctcgcacgcagtatgagggggtagtcagaggaggcccaatggatgggggtatcagcagg
ggaaacccagccagaggatcaatcacacagggcacgccagccctgaccgggtccagcatt
gcggctgacctgctgaagggcaccatcaccaagctgcccacggaggacctgagcagccca
gagaaggctcgggaacagctggccaagggacacgtcatctacgaaggcaagagtggacac
atcctctcctacgacgccattaaaaacccaagagaggccacgcgtagccccaggacaggc
catgagctcaaacgctcctacgatatgatggaggtcgccagaggccaccccgggagagag
ggagcccccttcgaagggttgatcagccgagccctgcccagagacagtccccacggggag
tctaaggagaggcctatgatgactggatccatcatgcaaggtacacccagaacctctgca
gaggcctatgaggagagcatgaagtacggcaagcagataaagagggagagtccacccatc
cgctcctttgagggcgggataggtaagggtaagccctacgagggggtgaacaccattaag
gagatgggccgctccatccacgagatcccccgccaggagaagcctggacaggacccccgc
aagacccccgacatggctgccaacatccgagcctccatggagggctctatatcccagggc
catcctctgagccagtcggccatcaagcacaacgtcaagtccctgatcaccagtcccagt
aggctgccccatggtcacaccatgccaccgctggaggccatggagcgggccaagtatgag
gagagcaaggcggcagcggagcagcgagctcgccacacatctgtggtcaactcggcaacc
tccgtcctgcgttccacccaccaggagcaaggaaagtcccagctcagcccgggcatgtac
caagatgctgactcccgcaggaccccggtcaactacagcactagctccatgtccagaggc
tcaccaatgctgggccgaggacaggagggctctgggaagcctgcatcccatgaccggaag
agtaccatgacccccactcagagggacagtgttccagccaagtctcctgtgtcagggggt
gaccccaaccaccctatggcctcccacagccccttcgacccacaccaccgccccatggcc
cccggagagcccaggttccacctacctccacacctagaccctgccctcttccacagggcc
gtcctggacccagctgcgtacatgttcccgaggcagccgtccccaacgggctaccacaac
acctaccagctgtacaccatggagaacacgaggcagaccatcctcaatgattatatcacc
tcccagcagatgcaggttatcccacggcccgatgtcgccaggggcctgtcgccacgggaa
cagcaaccgatagctctgtcttaccctcccggagcgcgagggataattgatctagcccag
atgcctccaactatcctgttgcctcaccctgggggaacaggtactcccactttggaccgc
atcacctacatccctggagctcaaccccctttccctcctaggcctttcaaccaagcctcc
atatctccaggccaccaagcccacctcgcagctactgcagcggccaaccaggagcgagaa
cgagagagggagcgtgatcgggagcaccgagagaaagagagagaaagggagcacagggag
cgggaacaggagcaaagacaacgagagcgcgagcgagcagtggctgcagcggttgccaat
gactacatgcgtggaggtcctgggcagccagacagaccaggtagccgtggatacctgcgt
agcccctccccctctatgaggtcacaggaagcccagcagcagcggcccagcatcttccag
ggagccaacagcaagggcgtcatcacccctctcatgccggcagcggcagcagcccaggca
ggagcccgttacagcactgcagccgacgcactggctgccctggtggacgccgccgcctcc
gcccctcaaatggacgtcaacaaaggcaaggactcttccaagcatgaccgagacgacgac
gacgacatgtctttatcatcctcggtggccaggcggcagcacgagcagcaacagcaggag
gcagacaggcgctccatgcagtctccctacggcccaatgtctctgccaggggggaaactc
cacccaggatacgctgaggggcccagtggtccccaggggagtaaggacaagggtcctccc
agcaagtcacgcatcgaggaagagctgaggaccaggggaaagaccaccatcacggccgcc
aacttcattgacgtcatcattacaagccagatcgcctcggacaaggactcccgggagaga
ggctcccagggctccgactcctccagcagcttgtcgtccagtaggtatgagatccccagt
ggaggagccatcgatgtgatcagcccagccaactctccagcacagtcccagcagcagcag
gacgacagggaccgggccgacagggaccgggccgacagggaccgggccgacagggagagg
gccgacagggaccgagccgacagggaccgggccgcacaggcagcagcacaagctggcatg
cgtccctttgacatgatccgctaccgccagtcagcagagtcacagcagcccccctcctcc
caggctgacggagggtactcccagtcccagcaggtccccaagacccaccgggtcatgacc
ctggctgaccacatctcgcatatcatcacccaggactttgccaggaaccaggaccctcct
cagtcctccactaccatctcctcctctgccaccaccacattccagagtgcccagctaccc
gtgtctatcgggggtcgtgccaaggtccccagccgctacagcccagaaaaccaccagaga
cccacacccagcagagtgtctcccgataatgcccctgacaagcccagagccagacctggt
aaatcccctgatcggggtggcaggggggcgatagagagctatgagcccatctcccctccc
cagagctaccaggataaacaacaagaggccagagagcagcagcaaccacagaggcgagat
gctgaccagcctgagatgaggggtgactctcgctcccctggcagtgtcagctacctgccc
tccttcttcaccaggctggagaacacctcccctatggtgaaatccaagaagcaggagatc
attcgtaagttgaactcctctggtgtcagtgattctgatgttggaaatgcacaaccaggc
acagagatcttcaacttgcctgctgtgaccagctcaagtagcgtgaaccccaggaaccac
tcctttagcgacccggccagtaacctgggcctggaggacataattcgcaaggccctgatg
gggaacctggaagaaaggccagaggagcaccagggagggcctcagcccagctctaacacc
cccagtaacgaggcccgccaggaggccaacccttcacctagcatgggcaaacagaaactg
cagagcaaagccaacagccgaaagtcaaagtcgcccaacccaggccaggcatacacagca
gcagagcggccctcgtcagtctcttccgtccactcagagggagactaccaccagcagccc
ccagcctggtcctgggaggaccggccctcgtccacaggctccatgcaattcccctataac
cccttgaccatgcgcatgctgagcagcaccccccccacgtccatacaggcccagcagccc
ccacctggaggccctctggggccccagcagcaacagcgtgtatgggagcgagagccccta
ctgtcggagcagtatgagaccctgtcagacagtgacgactga
DBGET
integrated database retrieval system
