Oncorhynchus keta (chum salmon): 118390083
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Entry
118390083 CDS
T09424
Name
(RefSeq) E3 ubiquitin-protein ligase RNFT1-like isoform X1
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118390083
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118390083
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118390083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-RING_16
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
118390083
NCBI-ProteinID:
XP_035636176
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All DBs
Position
11:complement(32958937..32965561)
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AA seq
428 aa
AA seq
DB search
MCFQSTYLVKSDSKRTLKSRVSPTVMQPNSSELGVHQAGHGLSLTLLTRTPAGTTGGSAV
PETSGAVRVPILSSGSWESCRGGASSRRSRASSRTSSHSHSHSHGGGHQHSHSEPSEVDP
AEADLESGEPSTSFLELRYLFRWVQKSLPFIIILCAKLVIQHALGLAVGVGLFTTFLYVN
KNIQTQVFLQDRRSKIECVWLLLFLASSTLLLYYTFLTETLYYCLIFLNPAVEPLGFWEV
LWVVGITNFTLKFLIMGFKCLILLLPSNLVTYRAQGRWYMLTEEVGQVYQAVAPTPLWFR
YLVTYQKVDGNTGLTLGVLLALVYFILKLLGLYGQWGSFQKTVRIFLSGEHTGAAATRSQ
CSEAGDICPICQAEYRDPRALLCQHIFCDECIALWFNREKMCPLCCTAITDKVHKWRDGA
TSPYLQIY
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtgttttcagtcgacttacttggtgaagagtgattccaaaagaacgttgaaatcgagg
gtatccccaactgtgatgcagcctaactccagtgagctgggtgtccatcaggcaggacat
ggtttgtctctgacgctactgaccaggacaccagcagggactacagggggctctgctgtc
ccggagactagtggagcggtccgggtacctatcctctccagcgggtcctgggagtcatgt
agaggaggggcgtcatcccgtaggtccagagccagttccagaaccagttcccacagccac
tctcattcacatggtgggggacaccagcactcccacagtgagcccagtgaagtggacccg
gctgaagctgatctggagtcaggggagcccagcacctcattcttggagctgcgctacctc
ttccgctgggttcagaagagtcttcctttcatcatcatcctttgtgctaaactggtcatc
caacatgccctaggtctagctgttggagttggcttatttacaacttttctttatgtgaat
aagaacattcaaacccaagtctttcttcaggatcgtcggtcaaagatagagtgcgtatgg
ctgctcctcttcctggcgtcctccacactcctgctgtactacacttttctcactgagaca
ctttactattgcctcatcttcctaaacccagctgttgagcctctaggtttctgggaggtc
ctatgggtggtgggcatcaccaacttcacactcaagttcctcatcatggggtttaagtgc
cttatcctactgctgccctctaacctggtgacctacagagcccagggacggtggtacatg
ctgactgaagaggtgggccaggtgtaccaggctgtggctcccacccccctatggttccgc
tacctggtcacctaccagaaagtggatggaaatactggcctcaccctgggagttctgctg
gctttggtctacttcatactcaagcttttaggattgtatggacagtgggggtctttccag
aaaactgtgaggatatttctcagtggtgagcacacgggggcagcagccaccaggagccag
tgcagtgaggctggggacatctgtcctatctgtcaggcagagtacagagacccaagggcc
ctcctgtgtcagcacattttttgtgacgagtgcattgctctctggttcaaccgggagaag
atgtgtccactctgctgcacggccatcacagacaaggtccacaagtggagggacggggcc
acgtcaccttacctccaaatctactga
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