Oncorhynchus keta (chum salmon): 118390111
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Entry
118390111 CDS
T09424
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25-like isoform X1
KO
K11849
ubiquitin carboxyl-terminal hydrolase 25 [EC:
3.4.19.12
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oke01002
]
118390111
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118390111
Enzymes [BR:
oke01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118390111
Peptidases and inhibitors [BR:
oke01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118390111
Ubiquitin system [BR:
oke04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118390111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP_UIM_N
UBA_8
UIM
UIM_2
DUF11
PhnI
UBA_4
Motif
Other DBs
NCBI-GeneID:
118390111
NCBI-ProteinID:
XP_035636241
LinkDB
All DBs
Position
11:complement(35052599..35096818)
Genome browser
AA seq
1079 aa
AA seq
DB search
MTVEQNVLQQHSQKHQQTLLNQLREVTGTTDVQLLQQALQVSHGDLAEAVAFLTEKKAKV
PQQDEATYYQTTQVGNDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLEESCRAFRETG
ITDEEQAISRVLEASIAENKASLKRTHTEVWSDSPNPHDRKRMENCPVGLKNVGNTCWFS
AVIQSLFNLLEFQRLVLHYSPPARVQDLPRNQKEHRNLPFMQELRNLFSLMVGSKRKYVD
PSCAVEILKDAFKSSESQQQDVSEFTHKLLDWLEDAFQMKAEEDRAGEKPKNPMVELFYG
RFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSSAENSAKSGQ
EHWFTELPPVLTFELSRFEFNQALGRPEKIHSKLEFPSMLYMDRYMDRNREITRIKREEI
RRLKEHLTLLQQRLERYLSYGSGPKRFPLADVLQYAMEFTSSKPVCTSPVGDFDTSAPPG
GTTGQLLPASSTAEQGPSSTPPEGLALALALTPAPSTQQRVPIHKPFTQSRLPPDLPMHP
APRHITEEELRVLEGCLHRWRSEVENDTRDLQGSISRIHRTIELMYSDKSMMQVPYRLHA
VLVHEGQANAGHYWAYIYDPHQRCWMKYNDISVTKSSWEELVRDSFGGYRNASAYCLMYI
NDKKPFLIEEEFNKETGQMLSGLDKLPPDLKAYVKEDNGLFDKEMEEWNTQQARKAQQEK
LALAVATAATAVIAETTATTTSSQPMSKEPSTPDNSAPQQDPEYMEQPSPTDYSRHLQED
TERAISKAAAEQQEERSPEGLLTAAIKVEYTRLLRFAQEDTAPGSDYRLQHVIVYFIQNQ
APKKILERTLLMQFADRNLGFNERCKSIMKVARAKLDLIKPEEINMEEYEMWHQDYRNFR
ETTIFLMIGLELFQKKSFVEALMYLIYSYQYNRELLVKGLYRGHDDELIGLYRRECLLKL
NENAAGMFESGEEPEVSNGLSIMNELVVPCIPLLLVHDIDEDLLSVEDMRNRWCSYLGQE
MEPNLQEKLTDFLPKLLDCSTEIKSFHDPPKLPTYSTLELVERYSRVISSLSRVPADGR
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtggagcagaatgtcctccaacagcattcgcagaagcatcagcagactctactg
aaccagctgagggaggtcacaggcaccacagacgtacagctacttcagcaggccctgcag
gtcagtcatggagacctggcggaggcggtggcctttctgacggagaagaaggccaaggtg
ccccagcaggatgaggccacctactaccagaccacccaggtgggcaacgacagatacatc
agcgttggcagccaggcagacaccaacgtgattgacctgacaggcgatgacaaggatgac
ctccagagggccatcgctctcagcttggaggagtcctgccgggccttcagggagacgggc
atcactgatgaggagcaggccatcagcagagttctggaggccagcatagcagagaacaag
gcaagcctaaagcggacacacacggaagtgtggagtgactcgcccaatccccacgacagg
aagagaatggagaactgccctgttggtctaaagaacgtgggcaacacctgctggttcagc
gccgtcatccagtctctgttcaacctgctggagttccagaggctggtgctacactactcc
cctcctgccagagtccaggacctgcctcgcaaccagaaggagcacagaaacctacccttc
atgcaggagctgaggaacttgttctccctcatggtgggttctaagaggaagtacgtggac
ccgtcgtgtgccgtggagatcctcaaggacgccttcaagtccagcgagtctcagcagcag
gatgtgagtgagttcacacacaagctgctggactggctggaggatgccttccagatgaag
gcagaggaggaccgagcgggtgagaagccaaagaacccgatggtggaactgttctatggc
cggttcctggctgttggtgttctcgaaggaaagaagtttgagaacactgagatgtttggg
cagtaccccctgcaggtgaacggctttaaggacctgcatgagtgtctggaggcggccatg
attgagggggagatcgagtccctgcactcatcagcagagaactctgccaagtctggacag
gagcactggtttaccgaactccctcctgtcttgacctttgaactgtcaagatttgagttc
aaccaagctttgggtcgacctgagaagatccacagcaagctggagttcccctccatgctg
tacatggacaggtatatggacaggaaccgagagatcaccaggattaaacgagaggagatc
aggagactgaaagagcacctgactctactccaacagcgtctggagaggtatctgagctat
ggctccggccccaagaggtttcctctggcagatgtcctgcagtacgccatggagtttact
tccagtaaaccagtctgcacctctcctgtgggggactttgatacatcagcaccccctggt
ggcacaacagggcaactgctgcccgcttcaagcacagccgaacagggtccctcctctacc
cctccagagggtttggccctcgccctggctctcaccccggccccctccacccagcagaga
gtgcctattcacaagcccttcacccagtcccgactgccccctgacctgcccatgcacccg
gccccacgacacatcactgaggaggagctccgggtgctggagggctgcctgcaccgctgg
aggagtgaggtggagaatgatacccgcgatcttcagggcagtatatccagaatccacagg
accattgagcttatgtactctgacaaatccatgatgcaggttccgtaccggctgcatgcg
gtgttggtgcatgagggccaggccaatgctggacactactgggcctacatctatgacccc
caccagcggtgctggatgaagtacaacgacatctcagtcaccaagtcttcctgggaggag
ctggtcagggactcgttcggaggctatcgcaacgccagcgcctactgcctcatgtacatc
aacgacaagaagcccttcctcatagaagaggagtttaataaggagacgggccagatgctg
agtggtctggataagctccccccagacctgaaggcctacgtgaaggaggacaacggcctg
tttgacaaggagatggaggagtggaacacacagcaggcacgcaaggcccagcaagagaaa
ctggccctggctgtggccaccgccgcaaccgctgtaatagcagaaacaacagcaacaaca
acgtcctctcaacctatgagtaaagagcccagtacaccagacaactccgctccacagcag
gacccagagtacatggagcagccgtcccccacagactactccaggcacttgcaggaggac
accgagagggccatctccaaagctgcagccgagcagcaggaggagaggagcccagaggga
ctgcttactgcagccattaaggtggagtacacccgtctgctgaggtttgcccaggaggac
acagccccggggagtgactaccgactgcagcacgtcatcgtctacttcatccagaaccag
gcccccaagaagatcctggagagaaccctcctcatgcagtttgccgaccgaaacctgggc
tttaacgaacggtgtaagagcattatgaaagtggcgcgtgccaaactagacctcattaag
ccagaggagatcaacatggaggagtatgagatgtggcatcaggactacaggaatttccgc
gagacaacaatcttcctgatgattggcttggagctgttccagaagaaaagctttgtggag
gcattgatgtacctgatctactcataccagtacaacagagagctgttggtcaaagggttg
taccgaggtcacgacgatgagctcatagggctctaccgcagagagtgcctgctgaaactg
aacgagaatgcggcggggatgtttgagtctggtgaggagccggaggtgagcaatggcttg
agcatcatgaatgagctggtggtgccatgcatccccctattgctggtccacgacatagac
gaggacctgctgtctgtggaggacatgaggaaccgctggtgctcctacctgggacaagaa
atggagcctaaccttcaggagaagctgacggacttcctccccaagttactcgactgctca
acagagatcaaaagcttccacgaccctcccaagctgcccacctactccaccttagagctg
gttgagcgctacagccgtgtcatttcctccctgagccgagtgcctgcagacgggagatga
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integrated database retrieval system
