Oncorhynchus keta (chum salmon): 118390198
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Entry
118390198 CDS
T09424
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00061
Fatty acid biosynthesis
oke00071
Fatty acid degradation
oke01100
Metabolic pathways
oke01212
Fatty acid metabolism
oke03320
PPAR signaling pathway
oke04146
Peroxisome
oke04216
Ferroptosis
oke04920
Adipocytokine signaling pathway
Module
oke_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
118390198
00071 Fatty acid degradation
118390198
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
118390198
09143 Cell growth and death
04216 Ferroptosis
118390198
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
118390198
03320 PPAR signaling pathway
118390198
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
oke01004
]
118390198
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118390198
Enzymes [BR:
oke01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
118390198
Lipid biosynthesis proteins [BR:
oke01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
118390198
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of breast milk
118390198
Exosomal proteins of breast cancer cells
118390198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
118390198
NCBI-ProteinID:
XP_035636419
LinkDB
All DBs
Position
11:complement(37998631..38019916)
Genome browser
AA seq
710 aa
AA seq
DB search
MMFKVDMHYIVFLPVYLLMWLYTLITFIPWYFLTNAGKKKAMAKREKAKSTTGKAEGPYR
CVENFDNLAREDFEGKDTLDKLFEHAVQRFGNTDCLGTRELLNEENETQPSGKIFKKLIL
GEYRWLSYDEVDQIISHLGSGLAALGQQPKSTIAIFCETRAEWMITAQACFRRNFPLVTL
YATLGEEAVAFGLNECGATHLITSTELLETKLKNVLPDMPNLKHVIYVDNKSISRTGYPE
GIQIYSMQAVQELGAKPDNLSVAVQRPQPTDLAVVMYTSGSTGRPKGVMIIHSNLIAGMT
GQCERIPGLGPKDTYIGYLPLAHVLEMTAEISCMTYGCRIGYSSPQTLSDQSTKIKKGSK
GDCSVLRPTLMAAVPEIMDRIYKNVMNKVQEMSYVQRTLFKLGYNYKLEQIKMGYDAPLC
NMLLFKKVKALLGGNIRMMLSGGAPLSSATQRFMNICFCCPVGQGYGLTETCGAGTITEV
ADYSTGRVGAPLICCEVKLRDWVEGGYTSQDQPHPRGEIMIGGPNVTMGYYKSEHLNNDF
WVDEQGQRWFCTGDVGEIHSDGCLQIVDRKKDLVKLQAGEYVSLGKVESALKNCPLIDNI
CAYANSDQNYVISFVVPNQKQLTTLANNNGISVAWEEICNHPAMEKEVLKAIKEVAASIK
LQRFEIPVKVRLSPEPWTPETGLVTDAFKLKRKELKNHFQTDIERMYGGK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcaaagttgacatgcattacatagtcttcttgcctgtgtacctattgatgtgg
ctgtacactctcatcacgtttatcccatggtatttcctcactaatgctggaaagaagaaa
gccatggccaagagagagaaagccaagtccaccacaggcaaagcagagggcccctatcgt
tgtgtggagaactttgacaacctggcccgagaggactttgagggaaaggacactctcgac
aagctgtttgagcatgcagtgcagcgcttcggcaacacagactgcctgggtaccagggag
ctcctaaatgaggagaacgagacgcaacccagcggcaagatctttaagaagctgatcctg
ggggagtacaggtggctgtcctatgacgaggtggaccagatcatcagccatctaggtagt
ggactggcagccctgggccagcagcccaagagtaccatcgccatcttctgtgagacacgg
gcagagtggatgatcactgcacaggcctgcttcagacgcaactttccattggtcactctg
tatgccaccctgggggaggaagcggtggcctttgggcttaatgagtgtggggccacacac
ctgatcaccagcacagagctactggagactaaactcaagaatgttttgccagatatgccc
aacctgaagcacgttatatacgtggacaacaagagcatcagccggacgggctaccctgag
ggcattcagatctacagcatgcaggcagtacaggagttgggagccaaacctgacaacttg
agtgtagctgtgcagcgcccccagcccacagatctggctgtggtcatgtacaccagcggc
tccacaggacgacccaaaggagtcatgatcatccacagcaacctgatcgctggcatgacg
ggccagtgtgagaggatcccaggactggggccaaaggatacctacattggctacctgcct
ctagctcatgtgctggaaatgactgctgaaatctcatgtatgacgtatggctgcaggatt
ggctactcttctccacaaacactctctgaccagtcaacaaaaatcaagaagggcagtaaa
ggagactgctctgtgttgaggcctactctgatggcagctgtaccggaaataatggaccgc
atctacaagaatgtgatgaacaaggtgcaagagatgagctatgtgcagaggactctgttt
aaactgggctacaactacaaactggaacagatcaaaatgggctacgatgccccactctgc
aacatgctgctgtttaagaaggtgaaggctctgctgggagggaacatcaggatgatgctg
tcaggaggagcgcccctgtcctccgccacccagcgcttcatgaacatctgcttctgttgc
cccgtgggacagggctatggcctcacagagacctgtggagcaggtaccatcacagaggtt
gcagactacagcactgggagagtaggagcccccctcatctgctgtgaggtgaaactacga
gactgggttgagggtggatacaccagccaggaccaaccccacccccgtggagagatcatg
attggtgggcccaacgttaccatgggttactataagagcgagcacctgaacaatgacttc
tgggtagatgagcagggccagaggtggttttgtaccggggatgtgggggagatccactct
gatggctgtctgcagatagtggaccgtaagaaggacctggtcaaactgcaggctggagaa
tatgtgtccttggggaaagtggagtctgctctgaagaactgcccccttattgacaacatc
tgtgcatatgcaaacagtgaccagaactacgtgataagctttgtggtaccgaaccagaag
cagctgacaactctggccaataacaacggcataagtgttgcctgggaggagatctgtaac
cacccagccatggagaaggaggtcctgaaggccatcaaagaggtggctgcctcaatcaaa
ctgcagcgttttgagatcccagtgaaagtgcgtctaagcccagagccctggacccctgag
actggcctggtgacagatgcattcaaattgaagaggaaggagctgaagaatcactttcag
actgatatagagagaatgtacggagggaagtag
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