Oncorhynchus keta (chum salmon): 118390200
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Entry
118390200 CDS
T09424
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118390200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118390200
Membrane trafficking [BR:
oke04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
118390200
Endosome - Golgi transport
Arf GTPase associated proteins
118390200
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
118390200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
PH_11
PH_3
PH_6
PH_8
RA
PH_13
RNR_Alpha
Ras_bdg_2
NICE-1
Motif
Other DBs
NCBI-GeneID:
118390200
NCBI-ProteinID:
XP_035636428
LinkDB
All DBs
Position
11:38045939..38059111
Genome browser
AA seq
1125 aa
AA seq
DB search
MADNEDALRAMQNCFHSQFSVDEAEYEDIEENRRTSVDEDSIYLGCTLSQSFNPDFHHSP
VIKMGWLHKTPPQGTLVFQKRWVMLDAQYLRYFQNEKEVYSKRIIAILSVTKVLNVGGQK
FEVVTRNRTFLFRAENNTVREEWVSVLKETIQQQCNSMEKSLMNFSDTCGQRASRVPLIS
KQGYLEMSGLRSKLYVVICADSVFLYRNAEEHSQGVGITSIEMNLGTVKGTDKRSFNLTT
IYRTFSFVAESEQQREQWVEALQACVSHSLSSNAVAQKIWSEEANQRCADCGAPHPDWAS
VNLCVVLCKCCAGVHRGLGQSVSKVRSLKMDENAWTENQLFLLLGNDKVNLFWAANIPPS
EMLCPSSDSEERQRFVTAKYCQGKYRCYHALFGQQEALNKALCNTIQTGDVLETLSLVFC
GADVNCYTGDPELPSPVSVAQHYGQTLQVEFLTHNHNTELPGSRTGDHTILEAALPISHT
GYLFKTASSTRAVTERKSKGDFSRRWCSLNQGNFSYYESEKSSSQSGQMKMSDVLCLVVN
PQGKHGYGHSFELYHDSGRVYLFGEDSPDTVREWIKVIVKALVPPVAEDLVGWSFERVGR
LHYTVGQSFHCPCLGWFSLGGSRLLLLLHGEDQVDNIDLRKLQELSVEQEAAAVVLVDRG
RRLRLEGDRRPDYQGWLSGIQQGLGRGDGPLDQQQLTETEVPVIVDRCISYITQHGLKSE
GIYRRCGVNSKIAALLLSLRHDARQVRLSEGVCQVDNVANVLKRFLREVGEGVFNGHQAS
LPWLHTTTVSEGRERVSQYKALLHSLPPVNRATLGAVINHLYCVQCFADENQMNMHNLAI
VFGPTLFQTDGTDNSAGQVVEELIQNYQDIFNVNAEQLQRQLDMISHVIKAQEEHAEEGT
PSPLTICGIYLERKEEGSELLVQISQAVSAEELVCEVLRRGNIPPQQGDYWSCFLVNDNQ
EMERPLHYQERALAIYFSLGKDCHLVVKRNCYMEAMLICIAAMVDVSRNSMIKFSDEKGQ
RGKRTFSRRLCVLDGTSLRLYKEVKSTQPERECQVHALKVYYGIKKRLQPPSCWGMTVVC
EQAERDKQQWYLCCESKNELIKWLATFMNLQHNSDLCPAASRPDS
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaatgaggatgcattgcgggccatgcagaactgtttccacagtcagtttagt
gtggatgaggctgagtacgaggacattgaggaaaacaggagaacatctgttgatgaagac
agtatctatcttggctgcacactgtcacaatccttcaaccctgattttcaccactcacct
gttatcaagatgggctggctgcacaagactccgcctcaggggacccttgttttccagaag
cgttgggtgatgttggatgcacaataccttcgatactttcaaaatgagaaggaggtctac
tcaaagcggatcatagccatactgtctgtcactaaagtgcttaatgttggaggacagaag
tttgaggtggtgacaaggaacaggactttcttgttccgtgctgagaacaacaccgtcagg
gaggaatgggtgtcagtactgaaagagactattcagcagcagtgtaacagcatggagaag
tcccttatgaacttcagtgatacatgtggacagcgtgctagtagagtcccgctcattagt
aagcaaggatacctggagatgagtggactgcgctccaagctctatgtagtcatctgtgcc
gacagtgttttcctctataggaacgctgaggagcacagccagggtgttggcatcacctcc
attgagatgaatttgggtactgtgaagggcacagacaaacggtccttcaacctcaccacc
atctacaggacattcagttttgtggccgagtcggagcagcagagggagcagtgggttgag
gccctgcaggcctgtgtcagtcactctctgtccagcaacgcggtggcccagaagatctgg
tctgaggaggccaaccagcgctgtgcagattgtggcgccccccacccagactgggcctct
gtcaacctgtgtgtggtcctctgcaaatgctgtgcaggggtgcacaggggcctgggccag
agtgtgtccaaagtccgcagtctgaagatggatgaaaatgcgtggactgaaaatcagctg
ttcctgttgctaggtaacgacaaagtaaaccttttctgggcagctaacattccaccaagt
gagatgctctgtccatcaagtgacagtgaggagcgccagcgctttgttactgccaagtac
tgccaggggaaataccgctgctaccatgcactgtttggccaacaggaagccctcaacaaa
gctctgtgcaacaccattcagacaggtgatgtattggagactctgtcgctggtgttctgt
ggagcagatgtgaactgttatacaggtgatccagagctacccagccctgtgtccgtggcc
cagcactatggacagacacttcaggtggagttcctcactcacaaccacaacacagagctc
ccagggtcaaggactggagatcacacaatcttagaggctgctctccccatctcacacact
ggttatctgttcaagactgcctcctcaacacgagccgttacagagcgcaaatctaaagga
gattttagtcgtcgctggtgctctttgaaccaaggtaacttcagctactatgagagtgag
aagagctccagccagagtggacagatgaagatgagtgatgtcctttgtctggtggtcaat
ccccaagggaaacatggttatggtcattcctttgagctgtaccatgactctgggagagtc
tacctgtttggagaggattcccctgacacggtgagggagtggatcaaggtcattgtcaag
gccctggtcccccctgtagcagaggacctggtgggctggtcctttgagcgggtgggccgg
ctgcactacactgtgggccagagcttccattgtccttgcctgggctggttctccctgggg
ggctccagactgctcctcctcctccacggagaagaccaagtggataacatcgacctgcga
aaactacaggagctctccgtggagcaagaagctgctgctgtggtgctggtggacagaggc
aggaggctgcgtttggagggggacaggaggcctgactaccagggctggctgagtggcatc
cagcagggcttagggagaggagacggccccctggaccagcagcagcttactgagacagaa
gtccctgtcatcgtggaccgctgcattagctacatcacacaacatggtttgaagtcagag
ggcatctatcggaggtgtggtgtgaactctaagattgccgccctgctgctctctctccgc
catgacgcccgtcaggttcgtctgagtgaaggggtgtgccaggtggataatgtggccaac
gtcctgaagagattcctcagggaagtgggagagggggttttcaatggccatcaggcctct
ctgccatggctccataccactactgtcagtgagggaagagagagagtgtcccagtacaag
gccctcctccacagcctccccccagtcaacagagccactctgggggctgtcatcaaccac
ctctactgcgttcagtgctttgcagatgagaatcagatgaacatgcacaacctggccatt
gtgtttggtcccacgctcttccagacggacggcactgataacagcgcaggacaggtggta
gaggagctcatccagaactaccaggatatcttcaatgtgaatgctgagcagcttcagagg
cagctggacatgatctctcatgtcatcaaagcacaggaggaacacgccgaggaggggacc
ccctcacctctcaccatctgtgggatttacctggagaggaaggaggagggctctgagctg
ctggttcagatctcccaggcagtgagtgctgaggagctagtgtgtgaggtcctgagacgc
gggaacatccctccacagcagggggactattggagctgcttcctggtcaacgacaaccag
gagatggagcgtccattgcactaccaggaacgagcgctggccatctatttctctctgggt
aaagactgtcacctggtggtcaagcggaactgctacatggaggccatgttaatctgcata
gctgccatggtagacgtgtccagaaacagcatgattaagttcagtgatgagaagggtcag
agggggaagagaaccttcagcagacgcctctgtgtactcgatggcacctctctcaggctc
tacaaagaagtaaagagtactcagcctgagagggaatgtcaagtccatgctctgaaagtc
tactatggcatcaagaagaggctacagccaccatcatgctgggggatgactgtagtgtgt
gagcaggcagaacgagacaaacagcagtggtacctgtgctgtgaatcaaagaacgaattg
atcaagtggctggccacttttatgaacctccagcacaatagtgacctgtgtcctgcagct
tccaggccagattcctga
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