Oncorhynchus keta (chum salmon): 118390229
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Entry
118390229 CDS
T09424
Name
(RefSeq) ras-related protein Rab-4B-like
KO
K07880
Ras-related protein Rab-4B
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118390229
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118390229
04031 GTP-binding proteins [BR:
oke04031
]
118390229
Membrane trafficking [BR:
oke04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
118390229
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
118390229
GTP-binding proteins [BR:
oke04031
]
Small (monomeric) G-proteins
Rab Family
Rab2/4/14 [OT]
118390229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
cobW
AAA_7
SRPRB
AAA_29
P-loop_TraG
ATPase_2
AAA_16
G-alpha
Septin
NACHT
ATPase
AAA_22
AAA_14
DUF3849
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
118390229
NCBI-ProteinID:
XP_035636471
LinkDB
All DBs
Position
11:complement(39104938..39115780)
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AA seq
216 aa
AA seq
DB search
MEMTETYDFLFKFLVIGSAGSGKSCLLHQFIENKFKQDSSHTIGVEFGSRVVMVAGKTVK
LQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLTNWLTDARTLASPNIVIIL
CGNKKDLEADREVTFLEASRFAQENEVMFLETSALTGENVEEAFLKCGRTIINKIESGEL
DPERMGSGIQYGDTTVRQLRQSPQAGSEQGRDQCNC
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgacagaaacatatgatttcctttttaaattcttggtgattggaagtgcggga
tcagggaagtcctgtcttctccatcaatttatagaaaacaagttcaagcaggactccagc
cacaccatcggggtggagtttggctcccgggtggtaatggtcgctggcaagacggtcaag
ttgcagatctgggacacagctggacaggagcgattccgatcagtgactcgcagttattac
agaggggcagcaggggctctcctggtttatgacatcaccagtcgggaaacttacaattcc
ctgaccaactggttgacagacgctcggacactggccagtccaaacatcgtcattatcctc
tgtgggaacaagaaggacctagaagctgacagagaggtcactttccttgaggcatcccgt
tttgcccaggagaatgaagtgatgttcctggagacgagcgccctcaccggagaaaacgtg
gaggaggccttcctcaaatgtggtcgcaccatcatcaacaagatagagtcgggtgagtta
gacccagagcggatgggctcagggatccagtatggtgacacgacggtgaggcagcttcgc
cagtcgccacaggctggctcagaacagggcagagatcagtgcaactgttaa
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integrated database retrieval system
