Oncorhynchus keta (chum salmon): 118390259
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Entry
118390259 CDS
T09424
Symbol
colgalt2b
Name
(RefSeq) procollagen galactosyltransferase 2 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00310
Lysine degradation
oke00514
Other types of O-glycan biosynthesis
oke01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118390259 (colgalt2b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
118390259 (colgalt2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oke01003
]
118390259 (colgalt2b)
Enzymes [BR:
oke01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
118390259 (colgalt2b)
Glycosyltransferases [BR:
oke01003
]
O-Glycan biosynthesis
O-linked Gal type
118390259 (colgalt2b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
118390259
NCBI-ProteinID:
XP_035636537
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All DBs
Position
1:complement(62173192..62228381)
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AA seq
534 aa
AA seq
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MMPAVGAVGVGLLCALLVALMPGGMSDLVTLVQDSVRPESSLLMPKVMIAILARNAAHSL
PHYLGCIDRLDYPKERIAIWAATDHSVDNSTAMLREWLKQAQDQYHYVEWRPMEEPKSYT
DEWGPKHWPPSRFNHVMKLRQAALKAARERWADYILFADGDNLLTNPKILNLLMAENLTL
VAPMLESRSLYSNFWCGITPQGYYKRTPDYQPIREWKRLGCFAVPMVHSTFLLDLRRGAS
RELAFYPPHPDYSWAFDDIMVFSFSARQADVQMYVCNREHYGFLPVPLKASQNVDDEKES
FTHTIAEAMTFLSAHENVDHNIAPSEYLYNPEMPQDKMGFDEIFLINLKRRLDRRQRMLS
TMTSLGLQATITDAVDGKALNSSQLQALGIEMIPGYQDPYSGRVLTRGEIGCFLSHHSTW
VQMAERGLSKVLVLEDDVRFEPRFKRRMMTIIEEVEKAQLDWDLIYVGRKRMQVHQPERS
VEGVNNLVEADYSYWTLGYALSAQGARKLLAAQAFSKMLPVDEFLPVMFNKHPK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgatgccggcggttggagccgtgggagtcggactgctctgcgcgctgcttgtcgccctc
atgccgggtggcatgtcggatttggtgactctggtgcaggactcggtccgacccgaatcg
tcactgctgatgccaaaagtcatgatcgccattctggctcgcaacgcagcgcacagcctg
ccgcactacctgggctgcatcgacaggctagactatccgaaggagcggatagctatctgg
gcagcgacagaccacagtgtggacaacagcacagccatgctgagggagtggctgaagcag
gctcaggaccagtaccactatgtggagtggagacctatggaggagcccaagtcctatact
gatgagtgggggcccaagcactggcctccgtcccgcttcaaccatgtgatgaaactgagg
caggctgctcttaaggcagcacgggaacgctgggcagattacatactgtttgcagacggt
gataacctgctgaccaacccaaagattctcaacctgctcatggctgagaacctgactctg
gtagctcccatgctagagtcacgctctctctactctaacttctggtgtggcatcacccca
cagggttactacaaacgtacccctgactaccagccaatcagggagtggaagcgtctgggt
tgcttcgctgtacccatggtgcactctaccttcctgctggacctgaggcgtggcgccagc
agggagctggccttctacccccctcaccctgactacagctgggccttcgatgacatcatg
gtgttctccttctctgcccggcaggcagatgtgcagatgtacgtgtgtaacagagagcac
tatggcttcctaccggttcctctgaaggcctcgcagaatgttgacgacgagaaggagagc
ttcacacacaccatcgctgaggccatgacatttctctctgctcatgagaatgttgatcac
aacatagcaccctcagagtacctgtacaatccagagatgccgcaggacaagatgggcttt
gatgagatattcctgattaatctgaaacgtcgtctggacaggagacagaggatgttgagc
accatgacctctttgggtctgcaggccaccatcactgacgcagtggacggcaaggctctg
aactcttctcagctgcaggcattgggtatagagatgattccaggttatcaggacccgtac
tctggccgtgttctaaccagaggagagataggctgcttcctcagccaccactccacctgg
gtacagatggcggagcgtggtctttccaaggtgctagtgctggaggatgacgtgcgcttt
gagcccaggtttaagaggcgaatgatgaccatcatagaggaagtagagaaggcccagctg
gactgggatctcatctatgttgggcgtaagcgtatgcaggtgcaccaaccggagcgttcg
gtggaaggggttaataacctggtggaggctgactactcttattggacgctgggctatgcc
ctgtcagcgcagggtgccaggaagctgctggctgctcaggccttcagcaagatgctacct
gtcgatgagttcctccctgtcatgttcaacaaacaccccaagtaa
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