KEGG   Oncorhynchus keta (chum salmon): 118390261
Entry
118390261         CDS       T09424                                 
Name
(RefSeq) probable ribonuclease ZC3H12B
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oke03019]
    118390261
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     118390261
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 KH_N4BP1_1st Regnase_1_C zf-CCCH_2 zf-CCCH_4
Other DBs
NCBI-GeneID: 118390261
NCBI-ProteinID: XP_035636538
LinkDB
Position
11:39994473..40011631
AA seq 971 aa
MVLELAVPANAGPLLHRSIPHIERIFRVRVSYGSAESSCDSANVSTSNIIIVRVAEGKED
DCTKAKDYIVSLTSPAHGKREHLTLAQHKQLVVLKPVIEYDSQAVVKVREHVVDISGGER
NVMTAWSMVEKIKMEKHPCREEASELTEAQQPSGESEEGNSSESESEHQLQVNSGSCKRT
ELFSATKPHRQLCRSPCLDRPSFSQSSTLPELRPDDTKAAAVLKQASDKVYQTKMEFALK
LGYSGEQVETVLNKLGAAALINDILAELVRLGNKGELEVQASSNTGTLVSRGGPCVKEAV
SPEVSLEDDSVDPYDNLRPIVIDGSNVAMSHGNKEVFSCLGIQLAVDWFVEKGHKDITVF
VPAWRKEQSRPDAPITDQDILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLACDSDG
IIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVV
PEHKKQPCPYGKKCTYGHKCKYYHPERANQPQRSVADELRAFAKLSAVKTMSEGALAKCG
TGLATAKGESGSEAKRVTPKRQSDPSIRSVACEPEERLSAVRKPEANSVPSLVSALSVPT
MQPAKSHAAGALNTRSASSPVPGSLQFTYSSLEHMSSVQYPHPPILVTNSHGASVTYSEQ
FPKYDSVSTDHGYYSMLSDFSNMSMSSMHNVDSFCSMEHEHGVYLRNPSQHCPEPCLSHS
NSDSFSSYGELYMSSVDSSLDESMKGQQSPAQSRLQASSHGGFHHEALTRVQSYGHEEPK
QGPCRKQSISHLAPHVQHPVVGARSSCPGDYPLPQNVLPSQSSQPGRSLGMTRMDSISDS
RLYESNPMRQRRPPLCREQHASWDPLPCGSESYGYHSYPLSNSLMQPCCERVMVRSMPDK
MEQIWRSPWENPPQVEHQERHVIPEHLYQTYRNLCNIFPSFVVHSVMEKNPHLTDPQQLA
AVIVTKLRSCH
NT seq 2916 nt   +upstreamnt  +downstreamnt
atggttttggagctggcagtgcccgcaaatgcaggccctttgcttcaccgctccatcccg
cacattgagcgtattttccgggtgagggtcagctacggatccgcggagtcaagctgcgac
agcgcaaatgtcagcaccagcaatatcataatagttcgtgtcgcggagggcaaggaagat
gactgcaccaaggcaaaagattacatcgtttccttaacttcgccagctcacggaaagaga
gagcatctaacgttggctcaacacaaacagctggttgtgctgaagccagtcatcgagtat
gactctcaggctgtggtgaaggtgagggagcatgtggtggacatctccggtggcgagagg
aacgtgatgacggcatggtcgatggtggagaagatcaaaatggagaaacacccttgcagg
gaagaggcctctgagctgactgaggcccagcagcccagtggggagtcagaggaggggaac
agctcagagagtgagtcagagcatcagctgcaagtgaacagcggcagctgtaagaggacg
gagctcttcagtgccaccaagcctcaccgtcagctctgtcgctctccatgcctggaccgg
cctagcttctcccagagcagtactctaccagagctccgccctgacgacaccaaggccgcc
gcagtcctcaaacaggccagtgacaaggtgtaccaaaccaagatggagtttgccttgaag
ctgggatactcaggtgaacaggtggagacagtgctgaacaagttaggggctgctgccctc
atcaatgatattctggctgagcttgtgaggcttggtaataaaggtgaactggaagttcaa
gccagcagtaacacaggcacgttggtctcccgtggaggcccctgtgtcaaagaggctgtc
agtccggaggtgtcacttgaagatgattccgtggatccttatgataatctcaggcctatt
gtcattgatggatcgaatgtggcaatgagccatggaaacaaagaggttttctcttgcctt
ggtatccaattggctgttgattggtttgtggagaaagggcacaaagacatcacagtgttt
gttcctgcctggaggaaagagcagtcgagacctgacgcccccattacagaccaagacatt
ttgcggaagctggagaaagaaaagatcctagtgttcaccccatctagaagagtccaaggg
aggagagtggtgtgctatgatgatcgctttatagtgaaactggcctgtgactctgatggc
ataattgtgtcaaatgacaactacagggacttacagaatgagaagccggagtggaagaag
ttcatagaggagcggctgctgatgtactcgtttgtcaatgataaattcatgccacctgat
gaccctttgggaagacacggtccaagtttagagaattttctccgcaagcgtcctgttgtt
ccagagcacaagaagcaaccctgtccatatgggaaaaaatgcacttatggacataagtgc
aagtactaccatccagagcgtgcaaaccagccccaacggtcagtggctgatgaactgagg
gcatttgccaagttgtctgctgtgaagacaatgagcgagggggccctggccaagtgtggc
actggactcgccacagctaagggggagagtggctctgaggctaaacgagtgacaccgaag
cgccagtccgaccccagcatccgctcagtcgcctgcgagccagaggagagactgtccgct
gtccgtaagcctgaggcaaattctgtgccttcccttgtgtctgccctcagcgtgcccacc
atgcagcctgcaaagagccatgcggctggtgccttgaacacacgatcagccagcagccca
gtacccggctccctccagttcacctacagctctctggagcacatgtctagtgtacagtac
ccacatccacccatcctagtcaccaacagccatggcgcttctgtcacttacagtgaacaa
tttcctaagtacgattctgtgagcacggaccacggatactactctatgcttagtgatttt
tctaacatgagcatgagcagcatgcacaacgtggacagcttctgtagcatggagcatgag
cacggggtttatctgagaaatcccagccagcattgccctgagccctgcctcagccactct
aacagtgactccttttcctcttatggggaattatacatgagctcagtggacagtagcctg
gatgagagcatgaagggacagcagtctccagcacagagcagactccaggcctcctcccat
ggggggttccaccacgaggccctgacccgggtgcagagctatggccatgaggagcccaag
caaggtccatgcaggaagcagtccatatcccacctggcaccgcatgtccagcaccctgtt
gttggggcccggtccagctgcccaggggactaccccttacctcagaatgtcctcccgtca
cagtcctcgcagccgggacgctccctgggcatgacacgtatggacagcatctcagactcc
aggctgtacgagagtaaccccatgaggcagcgcagacccccactgtgccgtgagcagcat
gccagctgggacccgctgccctgcggcagtgagtcctatggataccattcgtaccccctg
agtaacagcttgatgcagccgtgttgtgagcgggtgatggtccgcagcatgcctgacaag
atggagcagatttggaggtctccgtgggagaacccgcctcaagtcgagcaccaggagcgc
catgtcatcccagagcacctgtaccaaacataccgcaacctctgcaacatcttcccatct
ttcgtggtgcactctgtcatggagaaaaaccctcatctgacggacccacaacaactcgct
gccgtcattgtcacgaagctgaggtcttgccattga

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