KEGG   Oncorhynchus keta (chum salmon): 118390402
Entry
118390402         CDS       T09424                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein-like isoform X1
  KO
K12842  U2-associated protein SR140
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118390402
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oke03041]
    118390402
Spliceosome [BR:oke03041]
 Complex A
  U2 snRNP components
   U2 related factors
    118390402
 Complex B
    118390402
SSDB
Motif
Pfam: Surp RRM_1 CID cwf21 CTK3 RRM_7 SET_assoc
Other DBs
NCBI-GeneID: 118390402
NCBI-ProteinID: XP_035636821
LinkDB
Position
11:complement(47044706..47052455)
AA seq 898 aa
MCSISMADKNGKKGKPVGVKRTLTKREQEDLKKKEQEKAADVFEEFLASFDSNDKSGVKT
FVRGGIVNATKEEEAAEVKKSKLYRPNTKFTSVSQNVSPAHSSEVRRPIVKKKTEEKKKS
NLELFKEELKQIQEEREERHKKKKNEPGGGYGELDIPLTRRSIFDDDSATPNTTNLYIGC
INPKMNEEMLCKEFGKYGPLASVKIMWPRSDEERTRVTNRGFVAFMTRKDAERALAALDG
KTVLGFEMKLGWGKAVRIPPQPLYTPIGVLKISTPPPPSGLPFNAQPRDRFRNDFTKPWG
RSKEEFDKTLSEAVVKVVIPTERNLLGLIHRMIEFVVREGPMFEAIIMSKEKNNPDFRFL
FDNKSQEQVYYRWKLYSILQGEPPSEWRTADFRMFRGGSIWRPPLLNPYLHGDEEAGEEE
KSPSQEEELKKGQLKTEHRERLETLLRGLTPRREDVGDAMLFCLERAEAAEEVVGCIAES
LSLLQTPLQKKIARLYLVSDILYNSCAKVANASYYRKYFEAKLPQIFGDISDAYRNIQAR
LQAEQFKQKIMGCFRVWEDWAVYPEPYLIQLQNIFLGLVKAGDEVIERVEVASPDLDGAP
LDGAPLDGAPLDDLDGSPLAWDPASLDGVPVDDIDGVPLGAPMDDIDGMPLDDLAHSKVA
LSKWERVDDAEALPQANTESKWDSVGERYSGDNTNVSTNTKEGDGESEGDSSDDDSPSKY
DSADFKSSLSSFEMSESKRSRLRELEVKVMQFQDELETGKRPRKSGMNMQKQVEHYRNKL
LQKEFDKDDQEKKERSTPKSKDRSKKEERRDKTEESSKGREKEKSKRSQDRDRSRDRGRS
RDTEERTQKYRGHSPSKTKSKSPKKSKRSRSPSPARKRRRSSSRSPQRSHKKTKKSKH
NT seq 2697 nt   +upstreamnt  +downstreamnt
atgtgcagtatcagcatggcagacaaaaatggcaagaaagggaaacctgtaggtgttaag
agaacattgaccaagagagaacaagaagatctgaagaaaaaggaacaagaaaaagcagct
gacgtttttgaagagtttttagcatcttttgacagtaacgacaaaagtggggtgaaaacg
tttgttcgtggggggatcgtgaatgcaactaaagaagaggaagcagcagaggtcaaaaag
agcaagctttaccgaccgaacacaaagtttacttcagtgtcccagaatgtctcaccagca
cactcttcggaagtcagaaggccgattgttaaaaagaagacagaagagaagaagaagagc
aaccttgaacttttcaaagaggagctaaagcaaatacaggaggaacgtgaagaaaggcac
aaaaaaaagaagaatgagcctggaggaggatatggagaattggacataccactaacacga
cgatcaatatttgatgatgactcagcaacaccgaacacaacgaacctgtacattggctgc
attaacccaaagatgaatgaagaaatgctttgcaaagagtttggcaagtatggtcccctg
gcaagcgtgaagatcatgtggccccgtagtgacgaggaacgtaccagggtcacaaacaga
ggcttcgtggcctttatgaccaggaaagatgcagagagggccttggctgctctagacggt
aaaacagttttgggttttgaaatgaagctgggatgggggaaagctgttcgcatccctccc
cagcctctctatacacccataggggtactgaaaatctccacacccccacccccctctggc
ctgcccttcaatgctcagccccgagaccgcttccgtaatgactttaccaagccatggggc
aggtctaaggaggagtttgacaagactctgtccgaagccgtagtcaaagtggttatccca
acagaaaggaatctgttgggcctcatccacaggatgatagagtttgtggtgcgtgaggga
cccatgtttgaagccatcattatgagcaaagagaagaacaaccctgacttcaggttcctg
tttgacaacaaaagccaagagcaggtgtactaccgctggaaactctactccattctccag
ggcgagccccccagtgagtggaggacggcagacttccggatgttccgtgggggctccatc
tggaggccgcccctcctgaacccctacctccatggagacgaggaggcgggagaggaggaa
aagtctccctctcaggaggaggagctgaaaaagggccagctgaagaccgagcacagagag
agactggagacactgctgagagggctcacccctcgtagggaggatgttggtgatgccatg
ctgttctgtctggagagagccgaggcagcggaggaggtggtggggtgcatcgcggagtcc
ctgtctctccttcagacaccactgcagaaaaagattgccagactgtacctggtatccgac
atcttgtacaactcctgtgccaaagttgccaatgcatcttattatcgcaaatattttgaa
gcaaaattgccccagatatttggtgacattagtgatgcatatcgaaacatacaagcaaga
ctacaagctgaacaattcaagcaaaagataatgggctgtttcagggtctgggaagactgg
gccgtctacccagagccctacctgatccagctgcagaatatctttctgggtcttgtcaag
gcaggagatgaagtgatcgagagggtagaggtggcgtctccagacctggatggagcccca
ttggacggggcaccgttagatggagctccgctggacgaccttgacggctcgcccctggcc
tgggaccctgcctccctggatggggtgcctgttgacgacatcgacggagttcccctgggc
gctcccatggatgacatcgacggaatgcctttggatgatctggcccactccaaagtggct
ctgtctaaatgggagagggtggacgatgctgaagctctcccacaagctaacactgaatcc
aaatgggacagtgtgggagagcgatattctggggacaacacaaatgtaagtactaacact
aaggaaggagatggcgaatcagagggtgacagcagcgatgatgacagcccatctaagtac
gacagtgctgacttcaagagctccctcagtagttttgagatgtctgagagcaagaggagc
cggctgagagagctggaggtgaaggtgatgcagttccaggatgagctggagactgggaag
aggcccaggaagtccggaatgaacatgcagaaacaggtggagcactacaggaacaagctg
ctacagaaggagtttgataaggatgaccaggagaagaaagagcgatccacgcccaagtca
aaagacagatcaaagaaagaggagaggagagacaagacggaggagagcagtaaaggacgg
gagaaggagaagagcaaaaggagtcaagaccgggacaggagcagggacaggggacgtagt
agagacacagaggaacggacacagaaatacagaggacattctccctcaaaaacaaagtca
aagtctcccaagaagtccaagcggtcccggtcgccctcgcctgccaggaagaggaggagg
tctagctcccggtcaccacaacgctcccacaaaaagacaaagaagagcaaacactga

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