Oncorhynchus keta (chum salmon): 118390403
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Entry
118390403 CDS
T09424
Name
(RefSeq) DNA-binding protein RFX2-like isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118390403
Transcription factors [BR:
oke03000
]
Eukaryotic type
Other basic domains
RF-X
118390403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
ThermoDBP-RP_arch
Pox_D5
Motif
Other DBs
NCBI-GeneID:
118390403
NCBI-ProteinID:
XP_035636828
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All DBs
Position
1:complement(62833648..62898615)
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AA seq
745 aa
AA seq
DB search
MSSYQPLHEKPFVPSMQSSEGGSDSSSSVALRTSTSAQAPVVQPVPASQQRVLVQATGSA
QKGAQVQQLSVPRLQQVPQQIQQIHHVYPSQVQYVGEGGEAVYTNGTIRTAYSYNPEAQL
YGQGSGGAYFDSQGGGSQVTTVVSSSSGVPPHGMVGITMDVGGSQIISGGSTYLIHGGGM
EGGRHHASHSSRSSSAMLEMAIENLQKSEGIATHKSSLLNSHLQWLLDNYETAEGVSLPR
SSLYNHYLRHCQEQKLDPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSP
LNRLQEDSQYMAMRQQPVHQKQRFKPLQKVDGMGDSLSGGSQHSASTPEQSVAAQSQHHQ
QYIDVSHVLPPFPIPDLGTQPLPERINMNDVKKLQNLYRDHCEATLDVVMNLQFHYIEKL
WQTFWFSTAPSSDGTTTIPNSDEDLEGVIPRQKLIALCKYEPVKLWMRSCDHILYQALVE
ILIPDVLRPVPSTLTQAIRNFAKSLEGWLTTAMSDFPNEIVRTKAAVVSAFAQTLRRYTS
LNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQCDESVVQRLEQDFKVTLQ
QQSSLDQWAAWLDNVVNQVLKPHEGSPSFPRAARQFLLKWSFYSSMVIRDLTLRSAASFG
SFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGEFSDLNSMMLMDKDPSFSDDMSDIGS
DEGRGPNEPAVKRERIEINHSLQEI
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcataccaaccattgcatgagaaaccgtttgttcccagcatgcagagttcagag
ggagggtccgattcgtcgtccagtgtggcgctgcgtacgtccacctctgcccaggccccc
gtggtgcagcctgtcccagcctcacaacagagggtgctggttcaggccacaggctcagcc
cagaagggagcgcaggtgcagcagctgtcagtcccccggctgcaacaggtccctcagcag
atccagcagatccatcatgtctacccctcccaggttcaatatgtgggagaggggggagaa
gcagtttacactaatggaaccattcggacagcctactcctataaccctgaggcccagctg
tatggccagggcagtggaggagcctattttgactctcaaggcgggggttcccaggtcacg
acggtggtctcctcctccagtggtgtgccgccccacggcatggtgggcatcaccatggat
gtgggcggcagtcagatcatctcgggtggcagcacctacctgatccacggcgggggcatg
gagggaggccgccaccacgcctcacactcctcccgctcctcctccgctatgcttgaaatg
gcgattgaaaacctccaaaagtcggaagggattgcaactcacaaaagcagcctgctcaac
agccatctgcagtggctgctggataactatgagacagcagagggggtgagcctgccccgg
agctccctctacaatcactacctgcgccactgtcaggagcagaaactggacccggtcaac
gctgcctcctttgggaaactcatccgctccgtctttatgggcctcaggacccgccgcctc
ggcacaagaggcaactccaaataccactactatggcattagactgaagccagactcccca
ctcaacagactgcaagaggactctcagtacatggccatgagacaacagcctgtgcaccag
aaacaaaggttcaagcccctccagaaggtggatggcatgggggacagcctgtcaggaggc
tcccagcattcagccagcaccccagagcagtctgtggcagcccagagccaacaccaccag
cagtacattgatgtgtcccatgtcctgcctccgttccccatccctgacctgggcacccag
cccctccctgaacgcatcaacatgaacgacgtgaagaagttgcagaacctgtacagggac
cactgtgaggctactctggacgtggtgatgaacctccagttccactacattgagaagctg
tggcaaaccttctggttttcaacagcgccatctagtgacggaaccaccaccatccccaac
agtgatgaggatctggagggggtgatccccaggcagaagctgattgctctgtgcaagtat
gagcctgtcaagctgtggatgaggagctgtgaccacatcttgtaccaggccttggtggag
atcctgatccctgacgtgctgcgccctgtccccagcactctcactcaggccatccgcaac
tttgccaagagtctggagggctggctgaccacagctatgagcgactttcccaatgagatt
gtccgcaccaaggcagcggtggtgagtgcatttgctcagaccctgcgtcggtacacctct
ctgaaccacctggcccaggcggcccgcgccgtgctgcagaacacctctcagattaaccag
atgctcagcgacctcaatcgtgtggacttcgccaacgtacaggagcaggcgtcgtgggtg
tgtcagtgtgacgagagcgtggtccagcggctggagcaggacttcaaggtgaccctgcag
cagcagagctctctggaccagtgggccgcctggctcgacaacgtggtcaaccaggtcctt
aagccccacgaaggtagccccagctttcccagggccgcacgacagttcctgctcaagtgg
tccttctacagctccatggtaatcagggacctgaccctgcgtagtgctgctagtttcggc
tccttccacctcatcagactgctctacgatgagtacatgttctacctggtggagcaccgc
gtcgcccaggcaaccggagagactcccatcgctgtcatgggagagttcagtgaccttaac
tcgatgatgctcatggacaaagacccgtccttctcagatgacatgagtgacataggcagt
gacgagggccgagggcccaacgagccggccgtgaaaagagagaggatcgaaatcaaccac
tcgctgcaggaaatctga
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