Oncorhynchus keta (chum salmon): 118390599
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Entry
118390599 CDS
T09424
Name
(RefSeq) short transient receptor potential channel 2 isoform X1
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118390599
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118390599
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank
PKD_channel
DUF5040
Motif
Other DBs
NCBI-GeneID:
118390599
NCBI-ProteinID:
XP_035637233
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Position
1:complement(13660283..13667200)
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AA seq
852 aa
AA seq
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MDNITPDQWQAIVNKKLNFPPELIAAIQEDNAILVGSLLSTGDGIIRQLDESEDRLWREA
LNLSIRMGNEDTFSALMLGVKFDFRQIYEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSMAIFDHSIDDSQFAPGVTPLTLACQKDLYDIVTMLTKKGHAIPLPHSISCTCLECR
NGRQYDLLKFSLSRINTYRGMASRAYLSITTEDAMLSAFRLSRELRMLSKKEPEFKPQYL
SLEELCQEFAVEMLAMCRNQSEVTTVLNICDDDNEDELDEQTFEEGIPTLSRLRLAVNYN
QKLFVSHPICQQVLSSIWCGNIPGWRGSKTVWKLTVSLGIFFTMPLLCMIYWVAPKSKIG
KTLKIPVIKFLLHSASYLWFIIALLAESIFMELYRDEFASRQQNILYNSLHMIWVVGFFW
SECKNVWAEGLRGYIVDWSNILDMIVLSMYLASFVLRVLIMAIGHFVCQDQDLVEKCAYF
TQTVRDEWWQEDPQLISEILFAVTSMLSFTRLAYILPAHESLGTLQISIGIMIDDMMRFM
FVLMIIGTAFLCGLNNIYVPYATSPHLGRYDSCNLPNLQSSMHSFLLHFSFGFRFNETFS
FLFWTMFGASNQGYVDMPDFVLAQFVGRVLYGVFTLVIVIILLNMLIAMITNSFQKIEDD
ADVEWKFARSKLYLSYFREGSTIPVPFNLVPSPKALFYLLRSFFCCCNRKKIPDYPPIAS
MSNSTMNNSGEAGMDRVSYRLQVVKALVQRYIEAARREFGEAARKDVGNRITELNKGVGR
LHSDMKKFYQNLPNSKSFDSKGDGGNFLGKYIKGAKNNFKNFDKNEAMGNSPDLLRVNLH
LVGVVEEGKKEE
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggacaatattacgccagaccaatggcaggcgattgtgaacaaaaagcttaatttcccc
ccggagctgatagcagccattcaggaagacaacgcaattctggtgggcagcctgctgtcc
acaggggatggcatcatccgccagctggatgagtctgaggaccgtctgtggagagaagcc
ctgaacctgtccatccgcatgggcaatgaggacactttctccgctctgatgctgggcgtc
aagtttgactttaggcagatctacgaggcgctgctggtggcggtggacaccaaccagccc
cgggtggtcaagaggctcctggaccgcctggaccaggaaaagggcaacaagatggatgtg
cgctcattctccatggccatatttgaccactccatcgatgactcccagtttgcccccgga
gtgaccccgctgaccctggcctgtcagaaggacctgtatgacattgtcaccatgttgact
aagaagggtcatgccatccctctgcctcactctatctcctgtacctgtctggagtgcagg
aacggccgtcagtatgacctgctgaagttctctctgtctcgtatcaacacctaccggggc
atggccagccgggcatacctctccatcaccacagaggatgccatgctcagtgccttcaga
ctcagtcgggagctacgcatgctctccaagaaagaacctgaatttaagccccagtacctg
agcctggaagaactgtgtcaggagttcgcagtggagatgctggccatgtgtcgcaaccag
agtgaggtcacaacggtcctgaacatctgtgatgacgataatgaagatgaactggacgag
cagacctttgaggaggggattccaaccctgtcacgcctacgccttgcagtcaattacaat
caaaaactgtttgtgagtcatcccatctgccagcaagtgctgtcgtccatttggtgtgga
aacatcccagggtggcggggcagcaagacggtctggaagctcacggtgtctcttgggatc
ttcttcaccatgcctctcctctgtatgatctactgggtcgctcccaagtccaagattgga
aagactttgaagatacctgtgatcaaattcctgctgcactctgcctcctacctgtggttc
atcatcgcccttctagctgagtctattttcatggagctgtaccgcgatgagttcgcatcc
cggcagcaaaacatcctctacaactcccttcatatgatctgggtggtcggtttcttctgg
agtgagtgtaagaatgtgtgggcggagggtctgaggggttacatcgtggactggtccaac
attctggacatgatagtactcagcatgtacttggcctccttcgttctgagagtcctcatc
atggcaattggtcattttgtttgccaagaccaagacttggttgagaagtgtgcctacttc
acccaaacagtgcgggatgaatggtggcaggaggaccctcagctgatctcagagattctg
ttcgctgtgaccagcatgctcagcttcacccgactggcctacatcctgcctgcccatgag
tctctgggtactctacagatctccattggtataatgatagatgacatgatgaggttcatg
tttgtcttgatgatcattggaacagcttttctctgtggactgaataatatctacgtgccc
tacgcaacttctccacatcttggacggtatgacagttgtaatcttccaaacctacagagc
tctatgcattcattcctattgcacttttcctttggtttcagattcaatgaaaccttcagc
tttctcttctggaccatgtttggtgcatctaatcaaggctatgtggacatgccagatttt
gtcctggctcagtttgtaggcagggtcctgtatggggtcttcactctcgtcattgtcatt
atcctgctcaatatgcttatcgccatgatcactaattcattccagaagatagaggatgat
gctgatgttgaatggaagtttgctcgttcaaagctctacttgagttacttcagagagggc
tccactatacctgtacccttcaacctcgtcccctctccaaaggccttgttctacttactg
aggagctttttctgttgctgcaaccgaaagaagattccagactatcctcctattgcctct
atgtccaacagtacaatgaacaacagtggagaggcagggatggaccgagtgtcatatcgc
ctgcaggtggtcaaggctctggtacagcgctacatagaagcagcccgcagggagtttgga
gaggcggcacgtaaagatgtggggaacaggatcacagagctgaacaagggggtggggaga
cttcactctgatatgaagaagttctatcagaacctgccgaacagcaagtcctttgactca
aagggcgatggaggcaacttcctgggcaagtacataaaaggagcaaagaacaactttaag
aactttgataaaaatgaggcaatggggaatagcccagacctgttacgagtcaatctgcac
ctcgtaggggtggtggaggaggggaagaaagaggagtag
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