Oncorhynchus keta (chum salmon): 118390623
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Entry
118390623 CDS
T09424
Name
(RefSeq) rho guanine nucleotide exchange factor 15-like
KO
K20687
Rho guanine nucleotide exchange factor 15
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118390623
Membrane trafficking [BR:
oke04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118390623
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
PH
SH3_9
SH3_2
RepB_C
SOS1_NGEF_PH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
118390623
NCBI-ProteinID:
XP_052313439
LinkDB
All DBs
Position
11:54707186..54744603
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AA seq
1113 aa
AA seq
DB search
MIVSRLRPRSVVPPKPSNLKSLGPNIPNHFQTINQNRPNPNQNQPPSGERSQERKQHQLP
EGKVKRIVRKFSSQEMGQAGLETRTGVEAGAETVTGAKQGDGGVVGWTSTRTEAGQQADS
NRGQTRAQQADYDAIITSTVELSLIPPPVPLRKPRSGPHTQPTAQPTAQSDAVPLGQKTD
NHLGTLLTPGHGRGNRSAPDGSEVDEAPVCVTIESRQTTGSADTPSGHHGNMTQCQCICH
LRRTGMKLVWVPLEEEEDNYVEVIGDEEKEKRGNEHQKRVVKEGKEEDEDDYIEVTGDEE
KEKRGNQDQKRERKEVNEEMLGSFRAEERGGKSQTGCQTETAAVFSEHREVRVHKVSENN
SQRSFPSKHNTSSNAESSLALMICSQHSSYQHSTRQHSSNTKHSSHQHSSHTRPHQNKTE
TYDEVTYEAMPMSDREEPHPLPLPRLMKPPLMHKTQHPSPPKDNLQSMSTSSLSGLLTSI
SKSDIQKSTPSPQTPPSISHGNPHQPILRPLPPLPVLHDLCLLPCPIMPRPPQLRPQIPM
KPLPPNPEPSGPSCLSRHSSTDADVRDDWVTVDGEDVEEPQEQADSPRRISSDWGPLRLD
EPLYQIYQAKSIKEAIQLQSISRSASRATVDLHMRLRGGGSLGAPKGQFFRARNGPAEVT
LWQELPVVRDSGILERLSPEELQRQESMFEVLTSEASYLHSLNVLTDHFLMCRDLDDTLV
IHDKKTLFSNILHVYEVSQRFLKDLLSRIDENILITDVCDIIHQYALYDFSVYIDYIRNQ
GYQERAYSSLVQTNNPFALVMRRLEESPLCRRLPFSSFLLLPFQRITRIKILVQNILKRT
KEGTREENTASRALTSVSEIIKESNTQVGQMKQMEELIQVNNTLEFNKLKAVPIVSKARF
LEKRGELYELSKGASLFSSRLKLTPIYLFLFNDLLIITCKKSSERYMVTDHTHRSLVQVQ
PAGFGVGAEGPGPKLEHSFCLLLLENHRGIACEHLLKAPSESDMHRWMAAFPSLNDPNRK
EEVVYEDWDCPQVQCVKRYVAQQADELTMEPADIINVLCKTHEGWNKGMRLSDGEKGWFP
SKSVVEITNEHRRRRNLREQYRIAQAAAKVTKN
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgtcaagacttcgacccagatccgtcgttcccccaaagccttctaacctcaaa
tccttggggccaaacatcccaaaccacttccagaccataaaccagaacagaccaaacccg
aaccagaaccaacccccatcaggggagaggagccaggagaggaaacaacatcaactaccg
gaggggaaggtgaagaggattgtgcgtaagttcagcagccaggagatggggcaggcagga
ctagagacaagaacaggggtagaggctggggcagagacagtgactggggcaaagcaggga
gacggtggggtggtggggtggacaagtacaaggacagaggcaggacagcaggcagacagt
aacagaggacagacaagggcccagcaggccgactatgatgctataataacgagcactgtg
gaactcagcctcataccacctccagtaccattgagaaagccacgttctggccctcacaca
caacctacagcacaacccacagcacagagtgatgccgtgcccctggggcagaagacagac
aaccatctgggcacccttctcacacctggacatggacgaggaaacagatcagctcccgat
ggaagtgaggtggatgaagcgcctgtgtgtgttaccattgagagcagacaaaccacaggc
tcggcagacacccctagtggtcaccatggcaacatgacacagtgccagtgcatctgtcac
ctgaggagaactggcatgaagttagtctgggttcctctggaggaagaggaagataactat
gtagaggtgataggggatgaagaaaaagagaaacgagggaatgagcaccagaagagagtg
gtgaaggaggggaaggaagaggatgaagatgactacatagaagtgacaggggatgaagag
aaagaaaaacgagggaatcaggaccagaagagagagaggaaggaggtgaatgaagaaatg
ttgggatctttcagagcagaagagcgtggggggaaaagtcagacagggtgccaaacagag
acagctgctgtgttcagtgagcacagagaggtcagagttcacaaggtcagcgagaataac
agccagagatccttcccttcaaaacataacacatcatccaacgcagaatcttccctggcc
ctgatgatctgctcacagcacagctcatatcagcatagcacacgacagcacagctcaaac
accaagcacagctcacaccagcacagttcacacaccagaccccatcaaaacaaaactgag
acatatgatgaggttacatatgaggccatgcccatgtctgacagagaagaaccacatcca
ctcccactcccacgcctaatgaaacctccactgatgcacaagacgcagcatccctctcct
ccgaaggataatctccagagcatgtccacgtcctctctctctggcctactaacctcaatt
tcaaagtcagacatccagaagagtaccccttcccctcagactcctccctccatctcccat
ggcaacccccatcagccaatcctgcgacctctgcctccacttcctgttttacatgatctc
tgccttctcccctgccccatcatgccccgccctcctcaactcagacctcagattccaatg
aaacctcttccacctaaccctgagcccagtggccctagctgtctcagccgacactcatcc
acagatgctgatgttagggatgactgggtgactgtagacggggaggacgtagaggagcca
caggaacaggcagatagtcccaggaggatctcctcagactggggacctttgaggctggac
gaacctctgtaccagatctaccaggctaagtccatcaaggaggcgatccagctccagagc
atcagccggagtgccagcagggccaccgtggacctccatatgaggctcaggggcggtggg
tccttaggggcccctaagggccagttcttcagggccaggaatggccccgcagaggtcaca
ctgtggcaggagctaccggtggtcagagacagtgggatcctggagagactcagtccagag
gagctgcagagacaggagagcatgtttgaagtattgacatcggaagcctcgtacctccac
tcactgaacgttctcactgatcacttcctgatgtgtcgggaccttgatgacacactggtg
atccatgacaagaagaccctcttctccaacatactccatgtgtatgaggtcagccagagg
ttcttgaaggatcttctgagtaggatcgatgagaacattctgataactgatgtgtgtgac
atcatccaccaatacgccctgtacgacttctcagtctacattgattacatccgtaaccag
ggttaccaggagagggcctacagctccctcgtgcagaccaacaacccatttgcgttggtg
atgcggaggctggaggagtctcctctatgtcgtcgtcttcccttctcctcctttctgctc
cttcctttccagaggatcacacgcatcaagatccttgtacagaacatcctgaagaggact
aaagagggcactagggaggagaacactgcctctagagccctgacctcagtgtctgagatc
atcaaggagtccaacacacaggtgggccagatgaagcagatggaggaactcatacaagtc
aataacacattggagttcaacaaactcaaggctgttcccattgtctcgaaggctcgcttc
ctggagaagagaggagagctatatgagctatccaaaggggcctccctcttcagttctcgt
ctcaaactcacccccatctacctcttcctcttcaatgacctactcatcatcacatgcaaa
aagagctcagagcgctatatggtgacagaccacacccaccgctccctggtgcaggtccag
cccgcggggtttggggttggagcggagggccctgggcccaagttggagcactccttctgt
ctgctactgctggagaaccaccgaggcattgcctgtgaacacctgctgaaggccccctca
gagtcagatatgcaccggtggatggcagcattcccttccttaaatgacccaaacagaaag
gaagaggtggtttatgaggactgggattgcccccaggtgcagtgtgtgaaacgatacgtt
gcccagcaggctgatgagctcaccatggagcctgctgacattatcaacgtgctatgcaag
acccatgagggttggaataaggggatgcgtctgtctgacggagagaagggttggttccct
agcaaaagcgtggtggagataaccaacgagcatcggaggagacggaaccttcgggagcag
taccgcatcgctcaagctgcagctaaagtcacaaagaactga
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integrated database retrieval system
