Oncorhynchus keta (chum salmon): 118390630
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Entry
118390630 CDS
T09424
Name
(RefSeq) core histone macro-H2A.1 isoform X1
KO
K11251
histone H2A
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03082
ATP-dependent chromatin remodeling
oke04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118390630
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
118390630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118390630
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118390630
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
118390630
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118390630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Macro
Histone_H2A_C
Histone
DUF1764
Clp_N
Motif
Other DBs
NCBI-GeneID:
118390630
NCBI-ProteinID:
XP_052385247
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Position
11:complement(6046888..6090236)
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AA seq
445 aa
AA seq
DB search
MYKMAAYTFVFILVTDKNVYFQTHHLQLDTNILEDTCLAKSRTTMASPIPEPHTGSDTMS
SRGGKKKATKMSRSTKAGVIFPVGRMLRYIKKGLPKYRVGVGAPVYMAAVLEYLTAEILE
LAGNAARDNKKGRVTPRHILLAIANDEELNQLLKGVTIAAGGVLPNIHPELLAKKRGSKG
KLEAVITPPPAIKKSKMSASKKSAKKAAAGKRAKAKQKQGEVSKAASADSTTEGTPADGF
TVLSTKSLFLGQKLQVVQADISTIDSEAVVHPTNSTLYTGGEVGNIEPSLITMGTTCYRA
DTCGALEKKGGEDFVDAMLELRKKNGPLEVAGAVLSSGYGLPAKFVIHCNSPGWGSEKCE
ELLDQTVKNCLVLADEKKLKSVAFPSIGSGRNGFPKQTAAQLILKAISSYFVATMSSSIK
TVYFVLFDSESIGIYVQEMAKLESN
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtacaagatggcggcatacacatttgtatttattttagtaacggataaaaatgtttac
tttcaaacgcaccacctgcaactggacacaaacattttagaagatacatgtttggccaaa
tcgagaacgacaatggcatcgccaataccagaacctcacacgggtagcgacaccatgtcc
agccgaggagggaaaaagaaggccaccaagatgtccaggtcgacgaaggccggagtcatc
ttccccgtggggcgaatgctgcgatacatcaagaagggtctgcccaagtacagggtcggt
gtgggtgccccagtctacatggccgctgttctggagtacctcactgctgaaatcctggag
ctggcgggcaacgcagccagggacaataagaaaggacgtgtcacaccacgacacatcctt
ctagccatcgccaacgacgaggagctcaaccagctgctgaaaggtgtgaccatcgcagcc
ggaggagtcttacccaacatccaccctgagctgctagctaagaagagggggtcaaagggc
aagctggaggctgtcatcacgcctcctcccgccattaagaaatccaagatgtctgcctcc
aagaaatcagccaaaaaggcagctgcagggaaaagagccaaagctaagcagaaacaggga
gaggtgagcaaagctgcctcggcagacagcaccacggaaggaacacctgcggacggattc
actgtcctctccaccaagagtcttttcctgggtcagaagttgcaagttgtgcaagccgac
atttccaccattgacagcgaggctgttgttcacccgaccaattccaccctctacactggt
ggtgaagtaggtaatatagaaccctccctcatcaccatgggtacaacgtgttaccgtgcc
gacacctgtggtgctctggagaagaagggaggggaggattttgtggacgccatgttggag
ttacggaagaagaacggtcccctggaagtggctggagcggtgctgtcctctggctatggg
cttcctgccaagttcgtgatccactgcaacagtccaggctggggttcggagaagtgtgag
gagctgctggaccagaccgtgaagaactgcctggtcctggccgacgagaagaagctcaag
tctgtggccttcccttccattggcagtggaaggaatggcttcccgaagcagacggctgcc
cagctcattctcaaagccatctccagctactttgtggccaccatgtcttcttccatcaag
acggtctacttcgtgctgttcgacagcgagagcatagggatctatgtgcaggagatggcc
aagcttgaatcaaactaa
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