Oncorhynchus keta (chum salmon): 118390663
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Entry
118390663 CDS
T09424
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K06784
roundabout, axon guidance receptor 4
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118390663
Cell adhesion molecules [BR:
oke04515
]
Immunoglobulin superfamily
ROBO family
118390663
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_6
C1-set
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
118390663
NCBI-ProteinID:
XP_052385749
LinkDB
All DBs
Position
11:24497015..24540926
Genome browser
AA seq
1247 aa
AA seq
DB search
MQVGRWLLWVTWLYIWAEGSRQCQCQCTCIPEPGLAEGSKTPVKEHVRHRLEHRQHRPHR
DKPHRRKGSRLRTDVVEVRPRIVHHPSDVVVKVGSPATLSCRADGTPEPSIEWLRNGQPL
EMDKLDSQSRPIVLSEGSLFFLSVVPGRRSQSHEGVYTCMARNSAGKATSRNASLYIAAL
REDFRVQPCDVEVAVGEVAVMNCSPPVGHPEPNATWRKDGVPINNTNPHYTELNGKLIIA
PAQKNDSGLYICVASNTVGVRESRAARLSVQAKPVLVLKPQDVSVGTGESAQFYCEAKGD
PMPAVEWSRVQGPLPNGRYLVNPDQSLQIHYVTPQDSGRYTCTAVNDVGVVTASAQLVVE
GAASTRQRDLHRELSDLRIALENVTVLTPNSNMSQVQWKLQSFPTQPQYLDGFEVLCRSL
LPASSDWAAKRVPLPNFQTLVGPLKRGYKYDFKVRPYGSSLYGRESNTRHLRVPETVPSA
PPQAVSITRSPEHNDTVYVTWEPPPHKAHNGIIQGYQLWCVQLEEQQYLNWTVDSGTHSL
EINPLYPDKEYWVQVAAVNGAGVGVQSEPHRLVIDSRRSGAPQSDSPSRDLTRVLSVLRN
PVFIGSVGALLCCILTVTAFCLYRRHTQPGEHLGRGHGKAKGLYRLASEDLIIKHRMAAP
DSPWISGAWRPAQSGEKYQGMWAQSQENPGFRKTTKKDPGSLDSAVPIVPDSCGVYGTFY
VDLTGNGLKTFNSPTRCPKRPHCHTTSSSSHYSQYGTEAVRTAVKTMLVKDGQALPPAQP
KMGVLKESWEKNYKRELHAENSAPLVSSRSQALAVRGVPYKQRLSHLPSGGRSECVKPLA
ASRFLHHSASLHLVDMLPTPPPLPMDDTTDTHSLTSEEGSSRSTKLMVDDGSHQSVCAAS
GLCGPPSNPTGFPSYSRLSTASYCLSLDKEQDTTMTSQEVTQYLELSPDAERRSTMPENP
PSSSLSRPFSPSPTLGYICGLLPSDQLEDRLTDDQESQPMRSRRARLQSTPLSLCSEWEG
SLWNGWGSVSEGNMANSARTSFISSSDGSFMNDANFSGVLATVAAESMSVASFSGKTTRE
NTSLPRRRPSVPCSLRLQMKERSVSGSWIPCPFGTGVQPGWRRWRRSTAPSTPPRQMHPP
PATPGGIVVLTVTVRIAEPPEGVGFEDEDEGVGQGQPHSDDWIDDTFFVKSISMPRHAFN
LLMICKVLIENQEKNKVILCFLHELGSGLCFPVSGLQQVMSRRCNWE
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttggcaggtggctgctctgggtgacctggctctatatctgggcggaagggtca
cgccagtgtcaatgccaatgtacctgtatacctgagccgggactggccgaggggtcaaag
acaccggtcaaggagcatgtccgtcatcgattggaacaccggcagcatcggccacacagg
gacaagccacaccggagaaaaggttccagactgaggacggatgtggtggaggtgcgcccg
cggattgtccaccacccctcagatgtggtggtcaaggtaggcagccccgccaccctctcc
tgccgcgccgacggcacacccgagccctccattgagtggctccgcaatggccagcccctg
gagatggacaagctggacagccaatcgcggcccatcgtcctatcggagggcagccttttt
ttcctcagcgtggtgccagggaggcggagtcagtcacatgagggtgtgtatacctgcatg
gcaaggaacagcgctggcaaggctaccagccgcaacgcctccctctatatcgcagctcta
cgtgaggacttccgggtgcagccctgtgacgtggaggtggctgtgggggaggtggcggtg
atgaactgcagcccgccggtaggccaccccgagcccaatgccacctggagaaaagacggg
gtccccatcaacaacaccaatccgcactacactgaactgaatgggaagttgataatcgcc
ccagcccagaaaaatgactctggcctgtacatctgtgtggcctccaacactgtgggagta
agagagagcagggccgcccgcctgtctgtccaagccaagccagtgttggtgctgaagcct
caggatgtgtcggtggggacaggagagtctgcccagttctactgcgaggctaaaggagac
cccatgccagctgtggagtggagccgagtgcagggccctctgcccaacggcaggtatcta
gtgaatcctgaccagagcctccagatccactacgtgacaccacaggattctgggaggtac
acctgcacagctgtcaacgacgtgggggtggtcaccgccagcgcacagcttgtggtggag
ggagctgcaagcaccagacagagggaccttcacagagagttgtcggacctgcgcatagct
ctggagaatgtgacggtgctgactccaaactccaacatgtcccaagtgcagtggaagctc
cagtctttcccaacccagcctcaatacctggatggtttcgaggtcctctgtcgctctctc
ttgcccgcgagttcggactgggctgctaagagagtgccactacccaactttcaaacactg
gtcggcccgctcaagaggggctacaagtatgacttcaaagtgcgtccctacggcagcagc
ttgtatggccgggagagcaacaccaggcacctgcgtgtacctgaaacggtgcctagcgcc
ccacctcaggccgtctccataacaaggtcccctgaacacaatgacacggtctatgtgacc
tgggagcctccaccccacaaagctcacaacggcatcatccagggataccagttgtggtgt
gtgcagttggaggagcagcagtacttgaactggacagtggacagtgggacccacagtctg
gaaataaaccctctgtacccagacaaagagtactgggtccaggtggcagcagtcaacgga
gctggcgtcggggtgcagagtgaaccccatagactggtcatagactcccggaggtccggg
gccccccagtcagacagccccagtagggacctgactcgggtcctttctgtgctgaggaac
cctgtgttcatcggaagtgttggcgccctcctgtgttgcatcctaacggtgacggccttc
tgcctgtaccgccgccacacacaacccggcgaacacctgggacgaggccacggcaaggct
aaaggtttgtacaggttggccagtgaggacctaatcatcaaacaccgaatggcagcccca
gactcgccatggatctcgggtgcgtggagaccggcccagagtggcgagaagtaccagggc
atgtgggctcagagccaggagaatcccggcttcaggaagaccaccaagaaggaccccggc
tccctggactcggctgtccccatcgtgcccgacagctgcggtgtttatgggacgttctac
gtggacctgacgggaaacggcctcaagaccttcaacagccccacccgatgccccaagagg
ccccactgccacaccacctcctcctcctcacactactcccagtatggcacagaggcggtg
cgtaccgctgtcaagaccatgctggtcaaggatggacaggccctgcccccagcccagccc
aagatgggcgtgctcaaggagtcatgggagaagaattacaaacgagagctccatgcagag
aacagcgcccccttggtgtcatcgaggagccaggcgctggctgtgaggggagtgccttac
aaacagaggctcagccatctcccatcaggtgggcgctccgagtgcgtcaagcccctggcg
gcgtcccgcttcctgcaccactcagcctcactgcacttggtggacatgctccccacccca
cccccactgcccatggacgacaccactgacacacacagcctcacctcagaggaagggtcc
agcaggtccactaaactgatggtggatgacgggtctcaccagtctgtgtgtgctgcatcc
ggtctctgtggccccccatccaaccctacgggcttcccctcctacagccgcctgtccact
gcctcgtactgcctgtcattagacaaggagcaggacacgacaatgacctcacaggaagtc
acccagtacctggagctcagccccgatgctgaaaggcgcagcacaatgccggagaatcct
ccttcctcctccctgtcccgccctttctcccccagtcccactttgggctacatctgtggg
ctcctcccctccgaccaactggaggacaggttgactgacgaccaggagtcccagccaatg
cgctctcgacgggcccggctccagagcacacccttgtcgctctgcagtgaatgggagggc
tcgctgtggaatggctgggggtctgtgtcagagggcaacatggctaacagtgcccgcacc
agcttcatcagctcgtcggacggctcattcatgaacgatgccaacttttccggcgtgctg
gccactgtggccgcagagtccatgagtgtagcctctttctcaggcaagactactagagaa
aatacttctctcccccggcgtcgcccctcagtgccctgttccctccggctccagatgaag
gagcggagtgtttcggggagctggatcccatgcccgtttgggactggagtacaacctggg
tggaggagatggaggcgcagtaccgcgcccagtacacctcccaggcagatgcaccccccg
cctgcaacacctgggggcattgtcgtgctgaccgtcactgtgaggatcgccgagccaccg
gagggggtagggtttgaggacgaggacgagggggtgggtcaaggacaacctcacagcgat
gattggattgatgatacgttttttgtgaagtccatttcaatgccaagacatgcatttaat
ttactcatgatttgtaaagtactcatagaaaatcaggagaaaaacaaagtaattttatgt
ttcctccatgaattaggaagtggcctttgttttcctgtgagtggtttacaacaagtcatg
agtagaagatgtaattgggaatga
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