Oncorhynchus keta (chum salmon): 118390739
Help
Entry
118390739 CDS
T09424
Name
(RefSeq) LIM/homeobox protein Lhx1-like isoform X1
KO
K09372
LIM homeobox protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118390739
Transcription factors [BR:
oke03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
118390739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
118390739
NCBI-ProteinID:
XP_035637346
EnsemblRapid:
ENSOKEG00005006142
LinkDB
All DBs
Position
11:42527172..42532872
Genome browser
AA seq
402 aa
AA seq
DB search
MVHCAGCERPILDRFLLNVLDRPWHIKCVQCCDCKCNLTEKCFSREGRLYCKNDFFRRFG
TKCGGCAQGISPNDLVRRAKSKVFHLNCFTCMMCNKQLSTGEEMYILDEFKFVCKEDYLS
NSNGKDTTLLSVTTCSDPSLSPDSQDPQDDSKDSEIGHLSDKEVGSNENDEQNVGGKRRG
PRTTIKAKQLEVLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLS
VLGARRHAFFRGPRRMRTLVDRLEPGELIPNGHFSYYGDYQSEYYGPGGNFEYYTQGPPS
SQAQTPGDLGFSSGPAGTPLGGMDHHLAGHHPSSEVQCFNDIISHHPADSPSPEPNGPGS
MHSISSEMCGPSTPFTSLSLNGSGYSNQLSHPSSEMSEGTVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggttcactgtgccggctgcgaaagacctattctggacaggtttctactcaatgttctg
gacagaccatggcacattaagtgcgtgcagtgctgtgactgtaaatgcaatttgacagaa
aaatgtttttcacgggaagggagactgtactgcaaaaacgacttttttaggagattcggc
acaaagtgtggaggttgcgcccaggggatctcgcccaacgatttggttcgaagggcaaag
agcaaagtgtttcacctgaactgtttcacgtgtatgatgtgtaacaaacagctatccacc
ggagaggaaatgtacattctagatgaatttaaatttgtttgtaaagaggattatctaagc
aacagcaacggaaaggacacaaccctcctctcagtcacgacttgcagtgacccaagtcta
tctccagattcccaagacccacaggatgatagtaaagattcggaaatcggacatttatcc
gataaagaggtgggcagcaatgaaaacgacgagcagaacgtaggggggaaacgacgtggg
ccgcgaaccaccatcaaagccaagcaactggaggtcctcaaagctgctttcgcggccacg
ccaaaacccacccggcacatccgagaacagctggcgcaggagacagggctcaacatgaga
gtaatccaggtatggttccaaaaccggcggtcaaaagagcggcgcatgaagcagttaagc
gtgctgggtgcaagaaggcacgcgttcttccgcggtccaaggagaatgagaactctggtc
gaccgactcgaacccggggagctgatccccaacggtcatttctcatactatggtgattat
cagagtgaatactatgggcctggaggaaattttgagtactacacccaaggccccccatca
tcacaggcccagaccccaggggaccttggcttctcctctggccctgctggcaccccttta
gggggcatggaccatcacctagctgggcatcacccatccagtgaggtgcagtgcttcaat
gacatcatatctcaccatccagcggactcacctagcccagagcccaacggacctgggtca
atgcacagcatctccagtgagatgtgtggccccagcacacccttcacatcactgtccctc
aacggcagcggatacagcaaccaactgtcacacccctcctcagagatgagcgaaggcact
gtctggtag
DBGET
integrated database retrieval system
