Oncorhynchus keta (chum salmon): 118390855 Help Entry 118390855         CDS       T09424                                  Symbol rad50 Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism oke  Oncorhynchus keta (chum salmon) Pathway oke03440   Homologous recombination oke03450   Non-homologous end-joining oke04218   Cellular senescence Brite KEGG Orthology (KO) [BR:oke00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     118390855 (rad50)    03450 Non-homologous end-joining     118390855 (rad50)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     118390855 (rad50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:oke03032]     118390855 (rad50)    03400 DNA repair and recombination proteins [BR:oke03400]     118390855 (rad50) DNA replication proteins [BR:oke03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     118390855 (rad50) DNA repair and recombination proteins [BR:oke03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      118390855 (rad50)     BRCA1-C complex      118390855 (rad50)    NHEJ (non-homologous end-joining)     MRX complex      118390855 (rad50) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rad50_zn_hook SMC_N AAA_23 AAA_21 SbcC_Walker_B AAA_15 Hydro_N_hd ABC_tran AAA_29 AAA_22 AAA_16 AAA_13 Motif Other DBs NCBI-GeneID:  118390855 NCBI-ProteinID:  XP_035637447 LinkDB All DBs Position 12:2060659..2106616 Genome browser AA seq 1313 aa AA seqDB search MSRIEKMSILGVRSFGVEDKDKQVISFFNPLTVLVGPNGAGKTTIIECLKYVTAGEFPPG SKGNTFVHDPKDAHETDVRAQIRLQFTDLNGDKVAVQRSMQATQKGKKTEFRSLEGVITR IKHGEKVSLSSKCAELDREMISALGVSKAVLDHVIFCHQEESNWPLGEGKPLKNKFDAIF SATRYIKVLETLRQLRLKQSNEVRECQVELKFLKLNKDKALEIRELLASKETQLASSKDA VQKIAGQIEPLENRLVDIDENLGKVMKLDNDIKALDSRKKQMEEDNQELEEKMEQVFQGS GEQLQEMYQNHQRTVKEKEKRFTECQREMERAGRECQRLNRLQSDLLVEQGRLQLEADRH AQNMKARDSQVRALAGYLEMEGYDRSPFNDRQLQSFNRQVKERLDQETEAANQVMRDIQE KEAMKQQSIDEIRDKKTGLERTMELKKDLQVKKQHELRNVKSDLQRLEGSSSRLQELETE LTKAERELESAVQSSNVDGLKAEVLELQKDKAELDRTQRRLDREMETLNTHTTTRTQMDM LKKDKTDKEDQVRKIKSRHSEDLVSLLGHFPKKRELEDWIHAKSKEINSTREKLAKLNKE LASGEQNKSHITAEIRRKEQQLASYEEKMFNVCGSQDFQQDLGKLQDDLEKTSKQRAMLA GATAVYTQFISQLTEEGEPCCPVCQRIFPSEAELQDVINDMQSKLRLVPDKLKNTEQDLK RKERRKDDMMALKPVRQSIAELQEKELPELRNRLQNVNRDIERLKGDVEEQETLLSTLMS EEDTAKACLQDISLMDRYQLDLKDVERKIAQQAAKLQGVDLSRTIQQVNQEKQETQHRLD TTSSKMELKRKLIQDQQEQIQSLKSSMNETRAEKLQISSNMQKQQQLEEQCVEFTTDIQA LHREIKEAKEQVSPLAATLEKLQQERLDLMERRKQRQEEGQEKINSIKDKVKSIAAFERE ITGYTEEGKDDYREQKEGELRETNTQVHEAEKQREKINKDSGNIRQDIDTQKVQERWLQD NLTLRKRIEELKDVTKKREAVAKDMGNMQVLQLRNERRESEQRVDDLKKNRSVALGRQKG FEEEIIRFRKELREDQYGKADERFRDRMIVMRTTELANKDLDIYYKALDQTIMKFHSMKM EEINKIIRDLWRSTYRGQDIEYVEIRSDVDENSSGAGVKRRTYNYRVVMVKGDTALDMRG RCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQ RNFQLLIITHDEDFVELLGRSNYVEHFYRIRKNMDQCSEITKCSVSSLTSYLH NT seq 3942 nt NT seq  +upstreamnt  +downstreamnt atgtccagaattgagaagatgagcatcctcggtgtgaggagctttggagtggaagacaaa gacaaacaagtcatatcattctttaatcccttgactgtgttagtgggacccaatggtgct ggtaaaacgactatcattgagtgtctgaagtatgtaacagctggtgaatttcccccagga agcaaagggaatacatttgttcatgatccaaaggatgctcatgagactgacgtgcgagct cagatccgactgcagttcaccgatctaaatggagacaaggtggcagttcaaaggtccatg caggcaacacagaagggcaagaagactgagttcagaagtctggagggggtcatcaccagg atcaagcatggagagaaggtgagcctgagctccaaatgtgcagagctggacagagagatg atctcagccctgggtgtgtctaaagctgtcctcgaccatgtcatcttttgtcaccaagag gagtccaactggcccctgggagaagggaagcccctcaagaacaaatttgatgccatcttc tcagccacaaggtacatcaaggtgctggagacgctgaggcagctgaggctcaagcagtct aacgaggtgagagagtgccaggtggagctgaagttcctgaagctgaacaaggataaagcc ctcgagatcagggagctgcttgccagcaaggagacccagctggcctcctccaaagatgcc gtacagaagatagcgggccagatcgaacccctggagaaccgactggttgacattgatgag aatctgggaaaagtgatgaaactcgacaatgacatcaaggctttagacagcaggaaaaag cagatggaggaagacaaccaggaactggaggagaaaatggagcaggtgttccagggctca ggtgagcagctgcaggagatgtaccaaaatcaccagaggacagtgaaggagaaggagaag aggtttacagagtgccagagggagatggaacgagccgggagagagtgccagagactcaac cgcctccagtccgaccttctagttgaacaaggtcgtctccagctggaggctgatcgccat gcccagaacatgaaggcccgtgactcccaggtgagagccctggcaggctatctggagatg gagggctacgaccgttcccccttcaatgacagacagctgcagagcttcaaccgccaggtc aaagaaagactcgaccaggagactgaggccgccaaccaggtcatgagggatatacaagag aaggaggccatgaagcagcagagcatcgatgagatacgagacaaaaagactggtctggag aggaccatggagctgaagaaagacctgcaggttaagaagcagcatgagctgaggaacgtc aagtctgacctacagagactggagggctcctcctcccggctgcaggaactggagacagag ctcaccaaagcggagcgcgagctggagagcgcggtgcagagctccaatgtggatgggctg aaggccgaggtgctggagctccagaaggacaaagctgagctggaccgcacacagcgtcgg ctggaccgtgaaatggagacccttaacacacacaccaccacacgcacacagatggacatg ctcaagaaggataagacagataaagaagatcaggtgaggaagatcaagtcaaggcacagt gaggatcttgtgtccctgctgggtcacttccctaagaagagggagctggaggactggatc cacgccaagtccaaagagatcaactccaccagggagaaactagccaagctcaataaggag ctggcgtcaggggagcagaataagagccacatcacagcagagatcaggaggaaggagcag cagctggccagctatgaggagaagatgttcaacgtgtgtggcagtcaggacttccagcag gacctgggcaagctgcaggatgacctggagaagacttccaagcagagagccatgctggcg ggagccacagccgtgtacactcagttcatcagtcagctgacagaggagggcgagccctgt tgccccgtgtgccagcgcatcttcccctcggaggctgagctccaggacgtcatcaacgac atgcagtccaagctgcgcctggtccctgacaagctgaagaacaccgagcaggatctgaag aggaaagagaggaggaaggacgacatgatggctctcaaacctgtcaggcagtctattgct gagctgcaggagaaggagcttcctgagctgaggaaccggctgcagaacgtgaaccgggac attgagaggctgaagggggatgtggaggagcaggagaccctgctgtccactctgatgtca gaggaggacacagccaaggcctgcctgcaggacatctccctcatggacagataccagctg gacctgaaggatgtggagaggaagatagcccagcaagctgccaagctgcagggagtggac ctgagccgcaccattcagcaggtcaaccaggagaaacaggagacccagcatcgcctggac acaacatccagcaagatggagctgaagcgtaaactgatccaggaccagcaggagcagatc cagagcctgaagagcagcatgaacgagacccgggcggagaagctgcagatctccagtaac atgcagaagcagcagcagctggaggagcagtgtgtggagttcaccactgacattcaggct ctgcacagagagatcaaggaagctaaagagcaggtgtcccctctggccgccaccctggag aagctgcagcaggagaggctggatttgatggagcgcaggaagcagaggcaggaggaggga caagagaagataaatagcatcaaagacaaagttaaaagcattgccgcctttgaaagagag attaccggatacacagaagagggcaaggatgattacagagagcaaaaagagggggagctc cgagagaccaacactcaggtccatgaggcagagaagcaacgggaaaagattaacaaagac agtggaaacatcaggcaagacatagacactcagaaggtccaagagcgttggctgcaggac aacctgacgttgaggaaacgcatcgaggagctgaaggacgtgaccaagaaacgagaggct gtggcgaaggatatggggaacatgcaggtcctgcagctacgcaatgagcgcagggagtct gagcagcgcgtggacgacctgaagaagaaccgcagcgtagcattgggccgacagaaaggc ttcgaggaggagatcatccgcttccgcaaggagctccgcgaggaccagtacggcaaggct gacgaacgctttcgggacaggatgatcgtcatgaggaccacagagctggccaacaaggac ctggacatctactacaaggccctggaccaaaccataatgaagtttcacagtatgaagatg gaggagatcaacaaaatcatccgggacctctggcgcagcacataccgaggacaagacatt gagtacgtggagatccgctctgatgtggatgagaattcttccggggcgggagtgaagagg aggacctataactaccgtgtggtgatggtgaagggagacacggcgctggacatgaggggt cgctgcagtgccggccagaaggtcctggcctccctcatcatccgtctggctctggctgag accttctgtctgaactgtggcatcctggccctggacgagcccacaaccaacctagacagg gagaacatcgagtcgctggcacacgcccttgtggaaatcatcaagagccgctcacgccag cgcaacttccagctgctcatcatcacccatgacgaggactttgtggagctcctggggcgc tccaactacgtggaacacttctaccgtatcaggaagaacatggaccagtgctctgagatc accaagtgcagtgtctcctccctcacctcctacctgcactga

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