Oncorhynchus keta (chum salmon): 118390877
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Entry
118390877 CDS
T09424
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04080
Neuroactive ligand-receptor interaction
oke04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118390877
04082 Neuroactive ligand signaling
118390877
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118390877
Ion channels [BR:
oke04040
]
Ligand-gated channels
GABA-A
118390877
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
118390877
NCBI-ProteinID:
XP_035637483
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All DBs
Position
12:complement(3593167..3626036)
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AA seq
462 aa
AA seq
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MGGRTGTVILCVWACLLMANVLCGKSSGQNGQTDEQKDNTTVFTRILDRLLDGYDNRLRP
GLGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMSVLRLNNLMAS
KIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAHA
CPLKFGSYAYTRAEVVYVWTRGAAQSVVVAEDGSRLNQYDLMGQSVDSGVVQSSTGEYVV
MTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSIS
ARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKKE
SLLKKNNTTAYTAATATAFAPNIARDPGLATIAKSAPPPPTEPKEEPKPKPPEAKKTFNS
VSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGMTPGSH
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggtggacggacaggaacggtcatactatgtgtgtgggcctgtttgctgatggccaat
gtgctttgtgggaaaagctctggacagaatggccagacggatgagcagaaagacaacact
acagtgttcacccggatcctagaccgtctcctggatggctatgacaatcgtctcagacca
gggttgggagagcgtgtaactgaagtcaagactgacattttcgtgacgagtattgggccc
gtctcggaccatgacatggaatacaccatagacgtgttctttcgtcaaagctggaaggac
gagcggctaaaattcaaaggtccaatgtctgttctccgtttgaacaacctaatggccagt
aaaatctggacccctgacacgttctttcacaatggcaagaagtctgtggcccacaacatg
acgatgcccaacaaactcctacgaatcaccgaggagggaactctgctctacacgatgaga
ctgacagtaagggcagagtgtcccatgcacctggaggacttccccatggacgcccatgct
tgtccattgaagtttggtagctatgcttacaccagagctgaggttgtgtacgtgtggacg
agaggggcagcccagtctgtcgtggtggctgaagatggctctcggctcaaccagtatgat
ctgatggggcaaagtgtggactctggggttgtccagtccagcacaggagagtatgttgtc
atgacgacacacttccatctgaagaggaagattggttattttgtcatccagacgtacctg
ccctgcatcatgacagtaatcctatcccaggtgtcgttctggctcaacagagagtccgtc
ccagccaggactgtgttcggagtgacaactgtgctgaccatgaccaccctcagtatcagc
gctaggaactctctcccaaaagtggcctacgccacagccatggactggttcattgcagtc
tgctatgcttttgtcttctctgccctcattgagtttgctacagtgaactatttcacaaag
aggggctatgcctgggacggaaaaagtgtggtgccagagaagcaaaagaagaagaaggag
tccctcctgaagaagaacaacaccaccgcctacaccgccgccactgccacagccttcgct
ccaaacattgccagggaccctggtttggccaccattgccaaaagcgccccccctcccccc
accgagcccaaggaggagcccaagcccaagccaccagaggccaagaagaccttcaacagc
gtcagcaagatcgacaggatcgccagaatagccttcccgttactcttcggaacctttaac
ctggtctactgggcaacttacttgaataaaaagcccaagttacaggggatgaccccggga
tcccactaa
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