Oncorhynchus keta (chum salmon): 118390878
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Entry
118390878 CDS
T09424
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04080
Neuroactive ligand-receptor interaction
oke04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118390878
04082 Neuroactive ligand signaling
118390878
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118390878
Ion channels [BR:
oke04040
]
Ligand-gated channels
GABA-A
118390878
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Ortholog
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
118390878
NCBI-ProteinID:
XP_035637484
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Position
12:complement(3651420..3688496)
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AA seq
451 aa
AA seq
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MAFVFTFFFLSCVSNVWGNNPKSTEIDGNIYLDNITRILDRLLDGYDNRLRPGFGGPVTE
VKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEILRLNNLMVSKIWTPDTF
FRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLMNFPMDGHACPLKFGSY
AYPMSEIVYTWKKGPLFSVEVPEESSSLLQYDLIGQTVSSERLKSNTGEYVIMTVHFHLQ
RKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKV
SYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKVAAVKAAQEAAEAGRSDGE
SSSDASSMLKKRVNSTPHFERPAEVFPNPPVNAQAFLQQGSAVPSNNLLTGTSIIDKYSR
ILFPLSFGAFNLVYWIVYLTKDTMEMTRDSV
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgttttcactttcttttttctgtcctgtgtgagcaatgtttggggaaataat
ccgaaatcgaccgagattgatgggaatatctatttggataacattacgcgtatattggat
agattactggatggatatgacaacagactgcgacctggatttggaggtccagttaccgag
gtcaaaacagacatctttgtaaccagctttggtccagtgtcagatgttgagatggagtac
accatggatgtattcttccgtcaaacgtggattgacgagaggttgaaattcgagggcccc
atcgagattctgcgcctcaacaacctcatggtcagcaagatctggacgccagacacattc
ttccggaatggcaagaggtccatctctcacaacatgaccactcccaacaagctgttccgc
atcatgcagaacggaactatcctctacaccatgagattgactataaatgcggagtgtccc
atgcgactgatgaacttccccatggacggccatgcctgtcctctcaagtttggtagttat
gcctaccccatgagtgaaattgtgtacacatggaaaaaaggaccactgttctctgtggaa
gtaccagaggagtcctccagcttgctacagtacgatctaataggacagacagtgtccagt
gagaggttaaaatccaacacaggtgaatatgtaatcatgactgttcacttccacctgcaa
aggaagatgggcttcttcttgatccagacatacattccctgtatcatgacggtgatcctg
gctcaggtctctttttggatcaataaggaatctgtccctgctcgaactgtatttggcatt
accactgtgctaaccatgaccacactcagcatcagcgcccgccactctctgcccaaagtt
tcctacgccacggccatggactggtttattgccgtatgtttcgccttcgttttctcagcc
ctcatcgagtttgcagcagtcaactacttctccacgctgcaggccaaccgggagctccgc
aaggtggccgccgtcaaggcagcccaggaggctgcagaggccgggaggagtgacggggag
tcctcttcggacgccagcagtatgctgaagaagagggtgaactctacgcctcactttgag
aggccagcggaggtgttccctaaccctccagtgaatgcccaggccttcctccagcaaggc
tcagccgtgccgtccaacaacttactaacaggcaccagcatcatagacaagtactcacgc
atcctcttccctctgtcgttcggggccttcaacctagtctactggatcgtctatcttacc
aaggacaccatggagatgacaagagacagcgtgtga
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