Oncorhynchus keta (chum salmon): 118390927
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Entry
118390927 CDS
T09424
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX2 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118390927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118390927
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118390927
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118390927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
WWE_5
zf-UDP
zf_RING_Vps8
DUF6479
zf_RING_Vps8_fungal
zf-LITAF-like
Motif
Other DBs
NCBI-GeneID:
118390927
NCBI-ProteinID:
XP_052313659
LinkDB
All DBs
Position
12:7856634..7885651
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AA seq
618 aa
AA seq
DB search
MATASSSCVGRNVSRNGSSVSTPTSGAPGQSQPMVVVWEWQDDLGVWLPYSGQVSGYIEQ
CFSSPRGHRSGGPGSTSIWLGQSDSSLSPYLIDIPSLKQFRQDTGKTRSVRRQLFAQSSG
LGSGVYWEWVNDEGGWTPYETRTSILLEHSYQARQATADIVSHGYNYIVDLTALAQVNKA
TGYRRQVRRQGNLPYPLASGASVIHSGPSCSCQQCLSHSSTGPMSSRSRHSFSSGQLSRP
SLQVPSRATGAHPTSVYSPYPRRPLSVGGMAWGGPWPLAPSASQLPGAQLALSTSANGLS
IPTIPVQLNGSTSVSSALAGMASILMSAVGLGVRFMSAPSSAPPPPSSSSRPAGSKSRSS
VRREKRQHRTVPSQKPEDVIHRYMEEVASAQDEDCIICMDRLSCPSDYDVASEGAQAIQP
GAVGKFKCGHTLHMLCMLAMYNNGTKDGSLQCPSCKTIYGEKTGTQPKGKMEIYSISQSL
PGHPDCGTIQIIYSITHGIQGPEHPNPGQSYTSRGFPRFCFLPDNKKGRKVLELLKVAWT
RRLIFTVGTSSTTGEPDTVVWNEIHHKTEMMSNVSGHGYPDPNYLDNVLSELASQGVSDD
CLLRREDPSQGGASNSRL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgcctctagctcctgtgtggggagaaatgtgtctagaaatggatcctctgtc
tcgaccccgacctcgggagcacctggacaatcacagcctatggtcgttgtatgggaatgg
caggatgatcttggcgtctggctaccgtacagcggccaggtgagcggctacatagaacaa
tgtttctcttctccgcggggacacaggagtgggggtcctggctccaccagtatctggctc
ggacaatcagattccagtttgtcgccttatcttatagacataccaagcttgaagcagttc
cgccaagatacagggaaaacgcggtctgtacgccgtcaattgtttgcccagtcctcaggc
ttgggtagcggagtatattgggagtgggtgaatgacgaaggaggatggactccatacgag
actcgcacttctatcctactagaacacagctaccaggcacggcaggccacggcggacatt
gtctcacacggctataactacatagtggacctcacggcgctggcccaggtcaacaaggcc
acgggctaccggcgacaggtacgacggcagggtaacctcccctacccactggcatctggt
gcatccgtcatacactcgggcccgtcctgctcctgccagcagtgtctgagccacagcagc
actggccccatgtccagccgctcgcgccattccttctcgtcggggcagctgagccggcct
agcctccaggtccctagcagggcgactggagctcaccccacctcagtgtactcaccctac
cccaggaggccactttctgtggggggaatggcgtggggaggcccctggccactggcaccc
tccgctagtcaactccctggagctcaactggccttgtccaccagtgccaatggcttaagt
atccccaccatccctgtgcaactgaatggatccaccagtgtgagctcagccctggcaggc
atggcctccattttgatgtcagcagtgggactcggcgtgcgcttcatgagtgccccctcc
tccgctcctcctccccccagcagcagcagcaggcccgcgggctccaaaagtcgcagctcg
gttaggagggaaaagaggcagcacaggacagtcccatcccagaaaccagaggatgtcatt
caccgctacatggaggaagttgcctctgctcaagacgaggactgcatcatctgtatggac
cggctgtcttgtccgtcggattatgacgtggcgtctgagggagcccaggccatccagcct
ggtgccgtgggcaagttcaagtgtggacacaccctccacatgctctgcatgctggccatg
tacaacaatggtaccaaggatggcagcctccagtgcccctcatgcaagacaatctatggg
gagaagactgggacccagcccaaggggaagatggagatctatagtatctcccagtccctc
cctggccaccctgactgtggaactatccagatcatttacagcatcacccatgggatacag
ggtccagagcaccctaatcccgggcagtcgtacacctctagaggcttccctcgcttctgc
ttccttccagacaacaaaaagggcagaaaggtgctggagctgctgaaggtggcatggaca
cggcgcctcatttttacggtgggaacgtccagcaccacgggcgagcccgatacggtggtg
tggaacgagatccaccacaagacggagatgatgtccaacgtgtcgggtcatggctacccg
gatcccaactacctggacaacgtgctgtccgagctggcctcccagggggtgagcgatgac
tgcctcctcagacgggaggaccccagccagggaggagcgtcaaactctagactgtga
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