Oncorhynchus keta (chum salmon): 118390956
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Entry
118390956 CDS
T09424
Name
(RefSeq) remodeling and spacing factor 1-like isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118390956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118390956
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
118390956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
118390956
NCBI-ProteinID:
XP_035637723
LinkDB
All DBs
Position
12:complement(10594621..10644419)
Genome browser
AA seq
2240 aa
AA seq
DB search
MAASAPSAGFSDLCPSYAVICSFLERYGALLDLPELTFLQLERYLQDTSSVPKLLVDLHV
KLLRKIGKSVSADRWEKYIVKVCHEFNSTWAWELENKGYKDMSVECKTGILKHLCECQFD
DNVKFKTAINEEDPDKMRLHPIGKDKDGLMYWFQLDQDNNVRVYVEEQDDLDGSSWKCIV
RDRNSLAEILAQLKTQIDPALLTKKEGEEEDENKKTGGEGEIKKTEDTSGDEEDKLSKDT
ASLVSPKTENTEEKSPKEESKLDESDAKSPSNGLKDNQVESESTRQSEKPMVDDKATINT
QAIKEELMEVSESKESTATSATEPLAEKHCVAPQTEQTEEAKRKTAEELQRVMKNDQQAK
IPLKKREMKLSEDFDNSSGGGSRIIVRNPSVAPVKEAPKVEETSKVVSVALVGTMETKSD
QVNGDAQPVTEKSINKGMRESPKEMGIQRDSADSKEQQTKAVAREECEAAEASEKEKTNL
DMDKKEGQMAGNAEEPMEVAMADETNLQKTVPAPKAEKESTEALKKSSLKEAKSSSPLKK
PLTSSKDTSTPEKSSDLKEEQKVKVSKWDVKVRPTEHKTSTSIETDKTPLSSKSQKPDET
KGTDSSIAFQEVNVSAFKETVVHKDSCPLSVVKEMEKTSFIKATEMLLNPKNPETSVITK
QTERPDPITDKPESSKRPESPAVIKNTENPSNKEGAEKCDGSNDIKTSSVIKKTEISEKS
KDAKNLASSKETNTSSLLKKEDKPVPNKEAEKLESTKETNKSLVIKMTVKPEASKHTEKC
DTPKDIMSALTKEKPAVSAVSTNTNVAPEVKKKNVPEKDSKKIAICKDETRAVAAVTETQ
SGPKDVEMADIFEKSNQSQLEGPKQVEKLGIPKDTLKSTMPKYAEKSAKLATPKDAEKLA
TPKDAEKLATPKDAEKLATPKDAEKLATPKDAEKLATPKDAEKLATPKDAEKLATPKDAE
KLATPKDAEKLATPKDAEKLATPKDAEKLATPKDAEKLATPKDAEKLATSKDAEKLATPK
DAEKLVTPKDAEKLATPKDAEKLATPKDAEKLATPKDAEKLATPKDAEKLATPKDTEKLA
TPKDAEKLATPKDAEKLATPKDAEKLATPKDAEKLATPKDAEKLATPKDAEKLATPKDAE
KLATPKDAEKLATPKDAEKLATPKDAEKLATPKDAEKLATPKDAEKLATPKDAEKLATPK
DAEKLATPKDAEKLATPKDAERLATPKEAERLATPKDAERLATPKDAEKLPKSTMSENAG
KSATPKDTEKLATPTDAENSAKSATPIPEDAEILATPEEAEKSVNTKDTEKLATLKNTEK
ASKKIEDFTICEGQKPDASKETEKLADIMPAAAKGEKHVAFEDSKQLPSLKESVPVGRKQ
EEPMEISLEKSTDDNVIIRGHADKGWTKKFVKSGENSESEPIKNSNCMDCNAPSEKQATS
KKTSSLTDAEGETDKSQVKVIKEDATTQGCPKEDEKEDDQAKKNDQKEDDGAEKDNSTVA
EKLGEAKASKGSENKEDEKKDAGTTSEIQEEGIRLKIRGITHRRKAELQRTERDSGSDTG
KTGRSLRRSPRICRPTAKGVEFQDRRLEKKETTPPEEEDEEEEETVQRKPREKLDQDGQS
KSKGRRRRKTRWSNTRTRRRKKNGSGDDNESESSEEESEEDDSDESFKVEKGKRKWRNRN
RERHSDDSDTSSDDDLPPNEDPCKHCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDG
EWFCPPCQHKLLCDKLEEQLANLDAALKKRDRAERRKERLVYVGISVENIITPSLEVEEE
REEEKEEEVKKEKKEKKEKSKSWGRRSTRAKKSISYRFDEFDEAIEEAIEEDIREADGGG
AGRGKDMANITGHSRGKDMSTILAAGEVGEGKENGRPPRPNAGQRKKKRRRLNDLDSDST
VEEEESEDEFRLSDSTEEEEFVASDKSDAESEAAVDSNDDSDFGSTRRRTARTRRPAKCQ
RSTRPRRRRRARGYSDDEEEETSDEDEDEIMSEGSSEFSDSDLDCSQRRSRRSHTKRQVN
YCESSGDSDGSKAGTNRDKVKSRRRLASSDSEASSSRGSDDGKRERTRLKRRADSSEEES
QQRRRRLSLKRRRASEEDDDDSDESSEGERPVRKRVNRIDSDDSDKEEEKEETKEEEEGG
VLGKGASPLDYNLVELHPPTNGQSPIKALEGLAHIGPQKPGATAVTIAPNGLELAPQDDD
EDDLLGVTDLVDFVCNSDVL
NT seq
6723 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcggctccatcggcgggtttctccgatttgtgcccaagctacgccgtgata
tgctcttttctagagcgttatggagctttgctggatctaccggagctcacatttctgcag
ttggagagatatctccaagacacatcttcagttccaaagctcttggtggaccttcatgtg
aagttgctgaggaagattggcaagtctgtgtccgcagacagatgggagaagtacattgtg
aaggtgtgccatgagttcaacagtacctgggcatgggaacttgaaaataaaggatacaaa
gacatgtctgtggagtgtaagactggaatcctcaaacacttatgtgagtgccagtttgat
gacaatgtcaagttcaagactgcaattaacgaggaggatcctgataagatgcggctccat
cccattggcaaggacaaggatggcctaatgtactggttccaacttgaccaggataacaat
gtgagggtctatgtggaggagcaggacgacctggacgggtcctcctggaagtgcattgtc
agagacagaaacagcttggctgagatcctggcacagctgaagactcaaatcgacccagca
ctgttgacaaagaaagaaggagaggaggaagatgagaacaagaagactggcggagaaggg
gaaattaaaaagacagaggatacctcaggggatgaagaggacaaactctccaaggataca
gcttctttagtgtccccaaaaacagagaatacagaagaaaaatccccaaaagaggaatca
aagctggacgaatcagatgccaaatccccatcgaatggcctcaaagacaaccaagtcgag
tcagagtcaacaagacaatccgagaagccaatggtggatgacaaggccaccattaacacc
caggccatcaaagaagagctgatggaggtgtcagaatccaaggagagcacagccacaagt
gctacagagcctcttgcggagaaacattgtgtggcgccacagacagaacagactgaggaa
gccaagaggaagactgcagaggaactccaaagggtgatgaagaatgaccagcaggccaaa
atccccttgaaaaagagagagatgaaacttagtgaagattttgataatagtagtggcggt
ggcagtagaatcattgtgcgtaacccatctgttgctcctgtcaaagaagctcctaaagtt
gaggagacaagtaaagtggtctctgttgccctggtggggacgatggagactaaaagtgat
caagtgaatggtgatgctcagcctgtcacagaaaaaagtatcaataagggaatgagagaa
tctcctaaagagatgggaatacagagagattctgctgatagcaaagaacagcaaacaaaa
gctgttgctagggaagaatgtgaagcagcagaagctagtgaaaaagagaaaacaaatctg
gacatggacaaaaaggaagggcagatggcaggcaatgctgaggagcccatggaggtggcc
atggccgatgaaacgaacctacagaaaactgttccagccccaaaggcagagaaggaaagc
actgaagcactgaaaaaatcatccctaaaagaggctaaatcttcatcccctctgaaaaag
ccattgacttcatcgaaggatacaagcacaccggaaaagtcctctgatcttaaagaggaa
caaaaagtcaaggtatccaagtgggatgtgaaagtgcgtcctacagaacacaagacatcc
acatcaatagaaacagataaaacccctttatctagtaagtcacagaaaccagatgaaact
aaaggaacagattcatccattgcatttcaagaggtaaatgtgtctgcctttaaggaaaca
gttgtccataaagacagttgtcccctttctgtagtgaaagagatggaaaaaacatccttc
ataaaagccacagaaatgttgttgaaccctaaaaacccagaaacatcagtcatcactaaa
caaaccgagagacctgatcccattacagataaaccagaaagctcaaaacgccctgagtcg
ccagcagtcataaaaaatacagagaatccatctaacaaagagggcgcagagaaatgtgat
ggttctaacgatatcaaaacatcttctgtcattaaaaagacagagatttcagaaaagagt
aaagatgccaagaacctggccagctctaaagagaccaatacgtcctcattacttaaaaag
gaagacaaaccagttcccaataaagaagcagagaaactggagagcactaaagagactaat
aaatcgttggtcattaaaatgacagtgaaaccagaggcatctaaacatacagagaaatgt
gatacccctaaagacattatgtcagctctcaccaaggagaaacctgctgtcagtgctgta
agcacaaatacaaatgttgcccctgaggtgaagaagaaaaacgtcccggagaaagactcg
aagaaaatagccatctgtaaagatgagacgagagctgttgcagcagtgactgagacacaa
tctggccctaaagacgtggagatggcagacatctttgagaaatcaaaccaatcccaactg
gaaggacccaaacaggtagagaaattgggtatccctaaagacacattgaaatcgacaatg
cctaaatacgcagagaaatctgctaaactggctacgcctaaagacgcagagaaattggct
acccctaaagacgcggagaaattggctacccctaaagacgcggagaaattggctacacct
aaagacgcggagaaattggctacacctaaagacgcggagaaattggctacacctaaagac
gcggagaaattggctacgcctaaagacgcggagaaattggctacccctaaagacgcagag
aaattggctacccctaaagacgcggagaaattggctacacctaaagacgcggagaaattg
gctacgcctaaagacgcggagaaattggctacgcctaaagacgcggagaaattggctacg
cctaaagacgcggagaaattggctacgtctaaagacgcggagaaattggctacgcctaaa
gacgcggagaaattggttacccctaaagacgctgagaaattggctacccctaaagacgcg
gagaaattggctacccctaaagacgctgagaaattggctacccctaaagacgcggagaaa
ttggctacccctaaagacgcggagaaattggctacgcctaaagacacggagaaattggct
acgcctaaagacgcggagaaattggctacgcctaaagacgcggagaaattggctacgcct
aaagacgcggagaaattggctacgcctaaagacgcggagaaattggctacgcctaaagac
gcggagaaattggctacgcctaaagacgcggagaaattggctacgcctaaagacgcggag
aaattggctacgcctaaagacgcggagaaattggctacgcctaaagacgcggagaaattg
gctacgcctaaagacgcggagaaattggctacgcctaaagacgcggagaaattggctacg
cctaaagacgcggagaaattggctacgcctaaagacgcggagaaattggctacgcctaaa
gacgcggagaaattggctacgcctaaagacgcggagaaattggctacgcctaaagacgcg
gagagattggctacgcctaaagaagcggagcgattggctacgcctaaagacgcggagaga
ttagctacgcctaaagacgcggagaaattgcctaaatcgactatgtctgaaaatgctggg
aaatctgctacccctaaagacactgagaaattggctacccctacagacgctgagaattca
gctaaatcggctacacctatccctgaagacgctgagatattggctactcctgaagaagcg
gagaaatcggttaacactaaagacactgagaaattggctacccttaaaaacacagagaaa
gcttctaaaaagattgaagatttcacaatctgtgaaggacagaaaccagatgcctctaaa
gaaactgagaaactggcagacataatgccagctgcagcaaaaggagagaaacatgtcgcc
tttgaggattctaagcaattaccttctctcaaagagtctgtcccagtggggaggaaacag
gaagagcctatggaaataagtttggaaaagtcaacagatgacaatgtaattattagggga
catgccgataaaggctggacaaagaagtttgttaaaagtggagagaattctgagagcgag
cctatcaaaaactcaaactgcatggactgtaatgcaccatcagaaaaacaggctaccagc
aagaagacatcatctctcactgatgctgaaggtgagacggacaaaagccaggtcaaagta
atcaaggaagatgccacaacacagggatgccctaaagaggatgagaaggaagatgatcag
gctaagaaaaacgaccaaaaggaggatgatggtgctgagaaagataactcaactgtagca
gagaaactgggtgaggcaaaagcaagtaaagggtctgagaataaagaggatgaaaaaaag
gatgcaggaacaacatcagagattcaagaggaggggattcgcctgaaaatacggggaatt
actcatcgaaggaaagctgagctccagagaacggagagggactctgggtccgatactggt
aagactgggagatccctgaggaggtcacccaggatttgcaggccaaccgctaagggggtg
gagttccaggacaggaggctggagaaaaaagagaccacgccccctgaggaggaggacgag
gaggaggaggaaactgttcagaggaaaccgagagaaaagcttgatcaagatggacagtcc
aaatctaaggggcgacggaggagaaagacccggtggtccaacactcgaacacgacggcgc
aaaaagaatggttctggtgatgacaatgaaagcgaatcaagcgaagaggagagtgaggag
gatgacagtgatgagagctttaaggtggagaagggcaagaggaagtggaggaaccggaac
agagaaaggcacagcgacgactctgacacctcctcggatgatgacctccctcctaacgaa
gacccctgcaaacactgcggcctccccaaccatcccgagctgatcttgctatgtgactcg
tgtgacagtggctaccacacggcctgccttagaccccctctcatgatcatcccagatggg
gagtggttctgtccaccctgccaacataagctactctgtgacaagcttgaggagcagctt
gctaatctcgatgctgccctgaaaaagagggatcgcgctgagcgaagaaaagaacgtttg
gtctatgttggaataagtgtcgaaaacatcatcactccctctttggaggtagaggaagaa
agggaggaagaaaaagaggaagaagtgaagaaggagaagaaggagaagaaagagaaaagc
aagagctggggtcgaaggtcgacaagggcaaagaaaagcataagttacaggtttgatgaa
tttgatgaggctatcgaggaggcaattgaagaagacatcagagaggctgatggtggagga
gctggtcggggcaaggacatggccaacattacaggccatagcagagggaaggacatgtcc
accatcctggcagcaggcgaggttggtgagggcaaggagaatggacgaccgccacggccc
aacgccggccagcgcaagaagaagcgccggcgtctcaacgacctggacagcgacagcact
gtggaggaggaggagagcgaggacgagttccgtctcagtgacagtacggaggaagaggag
tttgtggcgtcagacaagagcgacgcagagagcgaagcggcagtcgactctaacgacgac
agtgacttcggcagcacgcgacgcagaactgccaggacaaggaggccggccaaatgtcaa
aggagcactcggccacgaaggcgccgcagagcgagagggtactcagacgatgaagaggag
gagacgagtgatgaagatgaggacgaaattatgtcagagggttccagcgagttcagcgac
agcgacctggactgtagccaacgccgatcccgccgtagtcatacaaagaggcaggtcaac
tactgcgagtcgtccggcgactccgatggctcaaaggccggcaccaaccgggacaaagtc
aaatcgcggaggcgcctcgccagctccgacagcgaagcaagctcctccagaggctcggac
gacggcaagagggagaggactaggttgaagaggagggctgactcgtctgaggaagagtcc
cagcagcgccgcagacgcctctcgctgaaacggaggcgagcctccgaggaggacgatgac
gattccgatgaatcatcggagggagagcgtccggtccgcaagcgtgtgaaccgcatcgac
tcggacgactctgacaaggaggaggagaaggaagaaacaaaggaagaggaggaagggggg
gtgctggggaagggagccagcccattggactacaacctggtggaactgcacccccctacc
aacggacagagtcccatcaaggccctggagggcctggctcacattgggccccaaaaacct
ggagccacagccgtcaccatagcgcccaacggactggagttggcgccacaggacgatgat
gaagatgacctgctgggggtcacagacctagtggactttgtctgcaatagtgatgtgttg
taa
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integrated database retrieval system
