Oncorhynchus keta (chum salmon): 118391004
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Entry
118391004 CDS
T09424
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118391004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118391004
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118391004
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118391004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8_fungal
PA
Motif
Other DBs
NCBI-GeneID:
118391004
NCBI-ProteinID:
XP_035637792
LinkDB
All DBs
Position
12:complement(12162057..12318172)
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AA seq
860 aa
AA seq
DB search
MTVPQRRLAGLWPWLLIAALQVVFGQTGLELAAAVETERSAPRAVIKVTLLRHEPTGKPI
TLEGLFVGGSAGSAEGKLMQSHPLSLCNTSEDERQESDFISIVKLESPERKVPQCLPLLK
KARLALERGAQAVIFDVTDDNDAALELHESDSLPLPVVLVKAEDAEELMGLVNKNEEARV
RIDIKKEDPKWPHYDVGILLTIVLAILAIVLIFAFRYRCKSNRTWDSVHQQTMRAISRLE
TRMYSSQGCGGSQRHRGGWGSNSSSNSSPVCAICLEEFLDGQDLRIISCAHEFHKECVDP
WLLQHRTCPLCMHNIMGTELSRQPQRSRLQQTPEHSQGFLHPHPYPHAFPQHPIPFSMRA
HYPRGPSGPYPSLSHYSSSPPLDPQTLRFLPSWPLGSGCGYIHPTEGPGRPHKAGSSCRT
AGHPLGSHYGPGSHRSCHAYRSGCPAQRSNSSSRLHHTPSFAPHISEGGAHSRGAEGGSC
SGGSYRTERSGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDY
DPFVYYGPGLGRTGRGDSMEAGAQRPRSLDSVMNRDRGRGSPEEQPQAVFSHVHYHRHRH
HHYGEDGEREHAQGQGPGRGSDEEQGAAVAIGSGTGSPPALDKDFPVCPLKHSPCQCPKA
EHTDSREVHGHGIEDHELSLCPPSGPPPALVAPAPLAAPAPCCHQDHGRGGHPHRRTDRL
GGCVLDGPSVLFHQSLELQDDCSIHIHYGQGPSYCCPPPDLPMPVPFILDSGGMGALGGL
EDWPCCGGPHHVVWQKRVQQAHSEPQLLGPGLGGPMDRPPPPCSRRHHGHHSPAHDRNTD
FCLYCQTLHNNQGSEEESGV
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttccccagcggcgattggccgggctctggccgtggctgctcatagcggccctg
caggtggtgttcggccagactggcctggagctggcggcggccgtagaaacggagcgctcg
gcccccagggctgtcatcaaggtgacactgctgagacacgagcccacggggaagcccatc
actctggaagggctgtttgtcggagggagcgccggctctgcagaggggaagctcatgcag
tctcaccctctgtccctgtgcaacaccagtgaagatgagcgccaggagtctgacttcatc
agcatcgtcaagctggagagcccggagcgcaaggtgcctcaatgtctgcctctgctcaag
aaggctcgcctggcactggagagaggtgctcaggctgtcatcttcgatgtcaccgacgac
aatgatgctgctctcgagctgcatgagtctgactccctgccgcttccggtggtgctggtg
aaggctgaggatgctgaggagctgatgggactggttaacaagaacgaggaagctagagtc
cgcatcgacatcaaaaaagaggacccaaaatggccccactatgatgttggtatcttgctt
actatagtcctggctattctggccatcgttttgatctttgccttccggtaccgatgcaag
tccaacagaacctgggactcagtccatcagcagaccatgcgagccatcagtcgtctggag
acgcgaatgtacagctctcagggctgcgggggctcacagcgccatcgtgggggctggggg
tctaatagcagctccaactccagccccgtctgtgccatctgtctggaggagttcctggat
ggacaggacctgaggatcatctcgtgtgctcatgagttccataaggagtgtgtggacccc
tggttgctgcagcaccgcacctgtcctctctgcatgcacaacatcatgggtacagagctg
tcacgtcagccccagaggagcaggctgcagcagacccccgagcacagccagggtttcctg
cacccccacccctacccacacgccttcccccagcatcccatccccttctccatgagggct
cactacccccgtggcccctctggcccctacccctccctgagccactacagcagctcccca
cccctggacccccagaccctccgcttcctccctagctggcctcttggctccggctgtgga
tacatccaccctacagagggccccgggaggcctcacaaggccgggagcagctgcaggacg
gcaggtcaccctctggggtcccactacggccccgggtcccaccgctcctgccacgcctac
cgctccggctgccctgcccagcgcagcaactccagttccaggctccaccacaccccctcc
tttgctccccacatctccgaagggggagcccatagccggggggccgagggaggcagctgc
tctggggggagctaccggacggagcgcagtggctacctggcagacgggccggccagtgac
tccagctctggcccctgtcacggttcatccagtgactcggtgctcaactgtaccgacgtg
tccctgcagggtgtgtatggtagctggtccacgttccgcagctcccttagcagtgactat
gatccgtttgtgtactacgggccgggtttgggacggacaggccgtggggacagcatggag
gcaggggcccagagaccaaggtccctggactcagtgatgaacagagacagaggacgaggg
agccctgaggagcagccgcaggctgtgtttagccacgtccactaccaccgccacagacac
caccactacggagaggacggggagcgggagcacgcccagggacaggggccaggcaggggg
tcagacgaggagcagggggctgctgttgctattggctctggtactggttctcccccggct
ctggacaaggacttcccagtgtgccctctgaagcacagcccctgtcagtgccctaaggca
gaacacacagacagtagggaggtccacggccacgggatagaggaccatgagcttagcctc
tgccccccgtcaggcccccctcctgccctggtagcaccagcacccttagcagccccagcc
ccctgctgccaccaggaccacggccgtggaggccacccccaccggaggacagaccggctc
ggcggctgcgtcctcgacggcccctcggtgctcttccaccagagcctggaactgcaggat
gactgtagcatccacattcactacggccagggccccagctactgctgccccccgcctgac
ctgcccatgcctgtgcctttcattctggactctgggggtatgggggccctagggggccta
gaggactggccctgctgtggagggccccaccatgtagtgtggcagaagcgggtgcagcag
gcccactctgagccccagttgctggggccagggctggggggccctatggacagacccccg
cccccatgcagcaggcgtcaccacggtcaccacagcccagcgcacgaccgcaacacagac
ttttgtttatactgccaaacattacacaacaatcagggatcagaggaggagtccggtgtg
tga
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