Oncorhynchus keta (chum salmon): 118391154
Help
Entry
118391154 CDS
T09424
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118391154 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oke01009
]
118391154 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118391154 (ncor1)
Protein phosphatases and associated proteins [BR:
oke01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118391154 (ncor1)
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
118391154 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
118391154
NCBI-ProteinID:
XP_035638129
LinkDB
All DBs
Position
12:23297300..23408119
Genome browser
AA seq
2536 aa
AA seq
DB search
MSSSSGYPPTQGSFSSEQSRYPPHSVQYTFSTTRHQQEFTVPDYRGHLQDQQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSVTSQQQTDGHEALEAKRPRMETVSEAHFSHNALSGGI
ILPLQSHQVQDSLRASGGEVKKETQFSGMKAESQSPGGLHRVGEEQDGSPSKLSKEELIQ
SMDRVDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPATPPPIPQEHNKHRSIVQIIY
DENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHAR
KQREQNICQRYDQLMEAWEKKVERMENNPRRKAKDSRTREYYERQFPEIRKQREQQERFQ
RVGQRGTGMSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDTEQRRVRFINM
NGLMDDPMKMYKARQFMNVWTEHEKDIFKEKFVQHPKNFGLIASYLERKCVSDCVLYYYL
TKKNQNYKTLVRRNYGRRRGRNQQITRPSQEDKSDDKIEEEKSEKSEKKEDEQNKEEEEK
DEKEDSRDIGKDKDKCDGGEDEDGKEQSTPRGRKTANSQGRRKGRITTRSMANEAASVAT
EEPLPPASAPEPVLPAESPQPLKAEPTTQKAVREPTKTAPGGAPMDPNRGALGTAAAANI
ETGETSRWTEEEMEVAKKGLVEHGRNWPAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQ
QHKQDIRRARGDRDPSQSESMASADDDENPEDSDGGENSSDTESAPSPSQADPSKVVGES
QRGDIAGGSESQRSDQDQASDRKGQDPSYGELRVKLEKSPEGEARDPDSQEDQDRERARA
AYEDQVHPKCEPQEVDMKPGCTEVQVKVEPDSAKEKGDNGEREEQRERHHSDNDSSATCS
ADEDVDAEPERQRIFSSMDKPSLLSPPGSVLMSTAKQAHLNMQQFQQGAAAIPPMVSHYS
NPHFSMIRYAHSERQAYGGRQQGESMSCLDQPTRQVGPFSTGGMPMGAPLSGFAMFQHQI
KAVHESAHAEDKQRQDQADPEHSRQPPNCPRFTTHSPTVLDREGKPFPYMPYDMKMALEQ
EAQSGRPGSPYRLSPRDMSKASPQPNDPNASRYSVPPVLQPAPNQVVQSLPDGVRVTFSR
HSRPANIPSPPPLIPTSKPTDKPSFIQGGSISQGTPGTYLTSHAVYGGPEVAKSSVGSIS
LGLPRQQDPTKPVSYIKQEECSPRGQSEGLLSQMQYEGVVRGGPMDGGISRGNPARGSIT
QGTPALSGSSIAADLLKGTNTKLATEELSNPEKVREHLAKGHVIYEGKSGHILSYDAIKN
PREATCSPRSGHELKRSHDMMEAARGHPGREGAPFEGLIIRALPRESPHGESKERPMMTG
SIMQGTPRTSAEAYEESMKYGKQIKRESPPIRSFEGGIGKGKPYEGVNTIKEMGRSIHEI
PRQEQPGQDPRKTPDMAANSRAAMEGSISQGHPLSQSAIKHNVKSLITSPSRLPHGPTMP
QLEAMERAKYEESKATAEQQQRARHTSVVNSATSVLRSTHQEQGKSQLSPGMYQDADARR
TPVNYSTSSMSRGSPMLGRGQEGTGKPTSHDRKSTMTPNQRDSVPAKSPVSGGDPNHPMA
SHSPFDPHHRPMAPGEPRFHLPPHLDPTLFHRAVLDPAAYMFPRQPSPTGYHNTYQLYTM
ENTRQTILNDYITSQQMQVIPRPDVARGLSPREQQQIAISYPPGARGIIDLAQMPPTILL
PHPGGTGTPTMDRITYIPGAQPPFPPRPFNPASISPGHQAHLAATAAACQERERERERER
EREHREKEREKERERENREREREEYRQRERERVVAAAVANDYMRGGPGQPDRPGSRGYLR
SPSPSMRSQEAQQQRPSIFQGTNSKGVITPLMPSAAAQAGARYSTAADALAALVDAAASA
PQMDVNKGKDSSKHDRDDDMSSSSSSSAARRQYEQQQQQEADRRSMQSPYMSLPGGKPHP
GYAEGSGGPQGGKDKGPPTKSRIEEELRTRGKTTITAANFIDVIIKRQIASDKDSRERGS
QSSDSSSSLSSSRYEVPSGGAIEVISPANSPAQAQQEKQQQDDRERADRDRAAQAATQAA
GMRSFDMIRYRQSAESQQPPSSQADGGYSQSQQVPKTHRVMTLADHISHIITQDFARNQD
PPQSSTTISSSATTTFQSAQLPVSSSGPGGRAKGHSRYSPENQTQAPSHHQRPTPSRVSP
ENAPDKPRARPGKSPDRGGRGAVESYEPISPPQSYQDKQQEAREQQQQPQRREADQPEMR
GDSRSPGSVSYLPSFFTKLENTSPMVKSKKQEIFRKLNSSGVGDSDIGNAQPGTEIFNLP
AVTSSSSVNPRNHSFSDPASNLGLEDIIRKALMGNLEERPEEHQGGPQPSCNTPSNEARQ
EANPSPSMGKQKLQSKANSRKSKSPNPGQAYAAAAQAAGGERPSSVSSVHSEGDYHQQAT
GWAWEDRPSSTGSMQFPYNPLTMRMLSSTPPTSMASPSMQAQQPPPGGPLGSQQQRVWER
EPLLSEQYETLSDSDD
NT seq
7611 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctacccccctacccaggggagcttcagcagcgagcagagccgc
tacccaccacactctgtccagtacaccttcagcaccacacgtcaccaacaggagttcacc
gtcccggactaccgaggtcacctgcaggaccagcagggtcggcgaaggccttccttgctt
tctgaattccaccctggaactgagaggcctccagagagacgtcatggctatgagcaacag
ttccacagtgtcacctcccagcagcagaccgacggacatgaggccctggaagccaagcgg
cctcgcatggagaccgtctctgaggcccacttttcccacaatgccctgtccggaggcatc
attctgcccctgcagtcccaccaggtccaggacagcctcagagcctccggaggggaggtc
aagaaggagacccagttcagtggcatgaaagcagagtctcagtccccaggagggctgcac
cgtgtgggggaggagcaggacggctcgccctccaaactgtccaaggaggaactgatccag
agcatggaccgtgtggacagagaaatcgctaaagtggagcagcagatcttcaaactgaag
aagaagcagcaacaactggaggaggaagcggcaaagccagtggagccagaaaagccggcg
acccctccccccataccacaggaacacaacaaacaccgcagcatagtccagatcatctat
gacgagaacaggaaaaaagctgaagaggcccataagatatttgaaggtcttggtcccaag
gttgaactgcccctttataaccagccgtcggatactaaagtataccatgacaacataaag
actaatcaagtgatgaggaagaagctgattctgtttttcaagagaaggaaccatgctcgt
aaacaaagggaacagaacatctgccagcgctacgaccagctgatggaggcgtgggaaaag
aaggtggagcggatggagaacaacccgcgtcgcaaggccaaggatagccgcaccagggag
tactacgagagacagttccccgaaatacgcaagcagagagagcagcaggagcgcttccag
agggttggtcagagaggaactggaatgtctgcgaccatcgccagaagcgagcatgagatt
tctgaaatcatcgacggcctttctgaacaggagaacaacgagaagcagatgagacagctg
tccgtcatcccgcccatgatgtacgacacagagcagaggcgagtcaggttcatcaacatg
aacggcctgatggacgacccaatgaagatgtacaaggctcgacagttcatgaatgtgtgg
accgaacacgagaaggatattttcaaggaaaagtttgttcagcacccaaagaattttggc
ctcattgcttcctatctagagagaaagtgtgtctccgattgtgtcctgtactactacttg
accaagaagaaccagaactacaagacgctggtgagacgcaactacggaagacggcgaggg
agaaaccagcaaataacacgaccctcacaagaagacaagtcagacgacaaaatcgaagag
gagaaatcggagaagtcggagaaaaaagaggacgagcagaataaggaagaggaagagaaa
gatgaaaaggaggactccagggacatcggcaaagacaaagacaagtgtgacggtggggaa
gacgaggacggtaaggagcagagcacgccacgcggcagaaagaccgccaacagccagggc
cggcgcaagggaaggatcaccacgcgctccatggccaatgaggctgcctctgtggcgacc
gaggagccactaccgccggcctccgcccctgagcctgtcctgcctgcagagtctcctcag
cccctcaaagctgagcctactacacagaaggctgttagagagcccaccaaaactgcacca
ggtggagctcccatggaccctaacagaggagcactaggaactgctgccgccgcgaacatt
gaaaccggtgagacttctcgctggaccgaggaggagatggaggttgccaaaaaaggcctt
gtggagcatgggcgtaactggccagccattgccaagatggtgggcaccaagagcgaggct
cagtgcaagaacttctacttcaactacaagagacggcacaacctggacaacctgctccag
caacacaagcaggacatccggcgggcgcggggtgatcgggacccgtctcagagcgagagc
atggcctcagctgacgacgatgaaaacccagaggatagtgacggtggagagaacagctca
gacacagagagtgccccttccccgtcccaggcagacccctccaaggtcgtaggagagtcc
cagaggggagacattgctggagggtcagagagccagcggtctgatcaggaccaggccagc
gatagaaagggccaggatccgtcctacggggagctgagggtcaagctggagaagagcccg
gagggagaggccagagaccctgactctcaggaggatcaggacagggagagggcccgggcg
gcctatgaggaccaggtgcaccccaagtgtgagccccaggaggtggacatgaagccaggg
tgtactgaggtacaggtgaaggtggagcctgactcggcgaaggagaaaggggacaatggg
gagagagaggagcagagagagaggcaccactcagacaatgattccagtgccacctgcagt
gcagatgaggatgtggacgctgagcccgagagacagaggattttttctagtatggacaag
ccttcgctgctcagccctcccggctcagtgctgatgtccacggccaagcaggcccacctc
aacatgcagcagttccagcagggcgccgctgccatcccgcccatggtcagtcactatagc
aacccacacttttctatgatcagatatgcccattcggagaggcaggcatacggaggcagg
caacagggtgaaagcatgtcttgtttagaccaacctacccgtcaagtgggtcctttcagc
actggcgggatgcccatgggagcccccctcagtggctttgccatgttccagcaccagatc
aaggcggtgcacgagtcggcccacgcggaggataaacagagacaggaccaggccgacccc
gaacacagcagacaacctcccaactgcccgcgcttcactacccacagccccactgtactg
gacagggagggtaagcccttcccctacatgccttatgatatgaagatggctctggagcag
gaggcccagtcaggtcggcctggatctccctacaggctctctcccagggacatgagcaag
gcctctcctcagcccaacgaccccaacgcctcccgctacagcgtgcctccagtgctccag
ccagctcccaaccaggtggtccagagtctgcctgatggagtccgtgtgactttctccaga
cacagccgacccgccaacattccatctcctcctccactcattccaacctccaaacccaca
gacaagccatcctttatccagggcggctccatctcccagggaactcctggtacgtacctg
acatcccatgctgtctacggtggcccagaggttgcaaagagctcagtgggctccatatcc
ctgggcttgcccaggcagcaggaccccaccaaacctgtgtcctacattaagcaggaggaa
tgttctccgcgtggccagtcggagggcctcctttcccagatgcagtatgagggggtagtc
agaggaggcccaatggatgggggtatcagcagaggcaacccagccagaggatcaatcaca
cagggcacgccagccctgtctgggtctagcattgcggctgacctgctgaagggcaccaac
accaagctggccacagaggaactgagcaacccagagaaggtccgggaacatctggccaag
ggacacgtcatctacgagggcaagagtggacacatcctatcctacgatgctattaagaac
ccaagagaggccacgtgtagccccaggtcaggccatgagctcaaacgctcccatgatatg
atggaggccgccagaggccaccccgggagagaaggagcccccttcgaggggttgataatc
cgagccctgcccagagaaagtccccatggggagtccaaggagaggcccatgatgactgga
tccatcatgcaaggtacacccagaacctctgcagaggcctatgaggagagcatgaagtac
ggcaagcagataaagagggagagcccacccatccgctcatttgagggggggataggtaag
ggtaagccctatgagggggtgaacaccattaaggagatgggtcgctccatccatgagatc
ccccgccaggagcagcctggacaggacccccgcaagacccccgacatggctgccaacagc
cgagccgccatggagggctccatatcccagggccatcctctgagccagtcggccatcaag
cacaacgtcaagtccctaatcaccagtcccagtaggctgccccatggccccaccatgccc
cagctggaggccatggagcgggccaagtacgaggagagcaaggcgacggcggagcagcag
cagcgagcgcgccacacctctgtggtcaactcggccacctccgtgctgcgctccacccac
caggagcaaggcaagtcccagctcagccctggcatgtaccaagacgcagatgcccgcagg
accccggtcaactacagcaccagctccatgtccagaggctcgcccatgctgggccgagga
caggagggcactgggaagcctacgtcccacgacaggaagagtaccatgacccccaatcag
agggacagtgttccagccaagtcccctgtgtcagggggagatcccaaccaccctatggcc
tcccacagcccctttgacccccaccaccgccccatggcccccggagagcctcgcttccac
ctgcctccacacctagaccctaccctcttccaccgggccgtcctggaccctgctgcatac
atgttcccgaggcagccgtccccgacgggctaccacaacacctaccagctgtacaccatg
gagaacacaaggcagaccatcctcaatgattatatcacctcacagcagatgcaggttata
ccacggcccgatgttgccaggggcctgtcgccacgggaacagcaacagattgccatctct
tatcctcccggagcgcgagggattattgatctagcccagatgcctccaactatcctgttg
cctcaccctgggggaacaggtactcccactatggaccgcatcacctacatccccggagct
caaccccctttccctcctaggcctttcaacccagcctccatatctccaggccaccaagcc
cacctcgcagctacagcagctgcctgtcaggagcgagaacgggagagggagcgcgaaaga
gaaagggagcatcgagagaaagagagggaaaaggagcgagaaagggagaacagggagagg
gaaagggaggagtacagacaacgagagcgtgagcgagtggtggctgcagcggttgccaat
gactacatgcgtggaggtccagggcagccagatagaccaggaagccgtggttacctgcgt
agcccctccccatctatgaggtcacaggaagcacagcagcagcgacccagcatcttccaa
ggaaccaacagcaagggcgtcatcacccctctcatgccatcagcagcagcccaggcagga
gcccgttacagcactgcagccgatgcccttgctgccctggtggacgctgccgcatccgcc
cctcagatggacgtcaacaagggcaaggactcctccaagcacgatcgagacgacgacatg
tcttcatcatcatcatcctctgcggccaggcgacagtacgagcagcagcagcagcaggag
gcagacaggcggtccatgcagtctccctacatgtctctgccaggggggaaaccccaccca
ggatacgctgaggggtctggtggtccccaggggggcaaggacaagggtccccccaccaag
tcacgcatcgaggaggagttgaggaccagaggaaagaccaccatcacggccgccaacttc
atcgacgtcatcatcaagcgtcagatcgcctcggacaaggattcacgggagagaggctcc
cagagctccgattcctccagcagcttgtcatccagtcggtatgaggtccccagtggagga
gccatcgaggtgatcagcccagccaactctccagcccaggcccagcaggagaaacagcag
caggatgacagggagagggctgacagggacagggctgcacaggcagcaacacaagcagct
ggcatgcgttcctttgacatgatccgctaccgccagtcagcggagtcccagcagcccccc
tcctcccaggctgacggagggtactcccagtcccagcaggtccccaagacccaccgggtc
atgaccctggctgaccacatctcgcatattatcacccaggactttgccaggaaccaggat
cctcctcagtcctccaccaccatctcctcctctgccaccaccacattccagagcgcccag
ctgccagtatctagctcgggccccgggggccgtgccaagggccacagccgctacagccca
gagaaccagacccaggccccatcacaccatcagagacccacgcccagcagagtgtctcct
gagaacgcccctgacaagcccagagccagacctggtaaatcccctgatcggggtggcagg
ggggcggtggagagttatgagcccatctcccctccccagagctaccaggataaacaacag
gaggccagagagcagcagcaacaaccccagagacgagaggctgaccagcctgagatgagg
ggcgactctcgatcccctggcagtgtcagctacctgccctccttcttcaccaagctggag
aacacctcccctatggtgaaatccaagaagcaggagatatttcgtaagttaaactcctct
ggtgtcggggattctgatataggaaatgcacaaccaggcacagagatcttcaacttgccc
gctgtgaccagctcaagcagcgtgaaccccaggaaccactccttcagcgacccggccagt
aacctgggcctggaggacatcatccggaaggccctgatgggcaacctggaagaaaggcca
gaggagcaccagggagggcctcagcccagctgtaacacccccagcaatgaggcccgccag
gaggccaacccctcacctagcatgggcaagcagaaactgcagagcaaagccaacagccgg
aagtccaagtcgcccaacccaggtcaggcatacgcagcagcagcccaggcagcaggaggg
gagcggccctcgtcagtctcctccgtccactcagagggagactaccaccagcaggccacg
ggctgggcctgggaggaccggccctcgtccacaggctctatgcagttcccctataacccc
ctgaccatgcgcatgctgagcagcacgccccccacctccatggcctccccctccatgcag
gcccagcagcccccaccaggaggccctctgggttcccagcagcagcgtgtgtgggagcgg
gagcccctactgtcggagcagtatgagaccttgtcagacagcgatgactga
DBGET
integrated database retrieval system
