Oncorhynchus keta (chum salmon): 118391194
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Entry
118391194 CDS
T09424
Name
(RefSeq) cell adhesion molecule DSCAM-like isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118391194
Cell adhesion molecules [BR:
oke04515
]
Immunoglobulin superfamily
DSCAM family
118391194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_6
V-set_CD47
C2-set_3
Interfer-bind
fn3_2
Motif
Other DBs
NCBI-GeneID:
118391194
NCBI-ProteinID:
XP_035638207
LinkDB
All DBs
Position
12:27230395..27382911
Genome browser
AA seq
2050 aa
AA seq
DB search
MWILAVIFFQCILNVFSEDLRSSLYFVNASVQEVVFASTTGTSVPCPAASVPPASLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFHFNPSSFSNLIHDNTYYCTAENPSGKIRSQDVHIKA
VLREPYTVRVEDQKAMRGNVAVFKCIIPASVEAYITVVSWEKDTVSINIQTPRFLITSTG
ALYILDVQNEDGLYNYRCMTRHRYTGETRQSNSARLFVSDPSNSGPVILDGFERREVMTS
HRVELPCKASGHPAPKYRWLKDNRPLEPDSRFRQSVTGLLIERAQPSDKGSYVCEVWNSY
GNAEVVGRLQVKEPLKAVVSPRKVKGSVGSQVSLSCSVSGSEEYDLSWYRNGEIIYPGNS
VRMTGNNRENLVMAGMAKSDGGAYQCFARKGKMSAQDFVQVILEDGTPKIISSFSEKVFG
TNEFVSLFCTVKGTPEPRVMWTLDDEPVIRDSRHRIGHYTDQEGHVISHLNISQTTGPDG
GVYRCICNNSAGAVSYQARINVRGPASIRPMKNLTAIAGRDMYIHCRVIGYPYYSIKWHK
DANLLPYNHRQRAFENNGTLKLYDVQKDVDEGEYTCSVLVSPSLSTSQSVHVSVKVPPTI
HPFEFPRFSIGQRVFIPCVVMSGDQPVFITWQKDGRPIPASLGVTIDNIDFTSSLRISNL
SLLHNGNYTCIARNQAATVEHQSQLIVRVGVDPNQPTTRPMLVPPKFVVQPKDQDGIYGK
AVILNCSAEGYPVPTIVWKHSKGAGVPQFQPIALNSGFRIQVLVNGSLLIKHVLEEDSGY
YLCKVSNDVGADVSKSMYLNVKIPAMITSYPNTTLATQGSEKRMSCTAHGEKPIMVRWEK
EDRIINPESSHRYVVTVKEVADEVISTLQIRPTGREDSGFFSCHAINSYGEDRGIIQLTV
QEPPDPPEVEIREVKDRTIALRWTMGFDGNSPITGFDIECKNKSGSWETAQRTKDVSPQL
NQATIIDLHPSSTYSIRMFAKNHIGKSEASNELTITTDEAAPDGPPQDVQLEAFSSQSIK
VSWRAPKKHLQNGAIRGYQVGYREFSSGGNYQFNVITMETTGDNDHSESITLDNLKKFTQ
YGVVVQASNSAGTGPSSQEVISTTLEDVPSRPPENVQATAASPEVISLSWLTPPKDALNG
ILLGFRVIYWANLPDGELGEIRNVTTSKPSLELDGLEKYTNYSIQVLTFTRAGDGVRSEQ
IFTRTKEDVPGPPAGVKAAAASNSVVFVSWLPPLKLNGIIRKYTVFCSNPHPTVSSEFEA
APDIFFYRIPNLSRNRQYSIWVVAVTAAGRGNASDIITIKPLAEAPAQILTFNGTVTTPW
MRDIVLPCKAVGDPAPTVKWLKEINGSPTPAVIDSRRIIQGNGSLAIRTVKAEDSGNYTC
VASNSFGPDKIILNLQVQVPPDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSED
NSEQWGNFAISPSERSYRLENLKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQYSK
EQELFTSINATRVKLNLIGWNNGGCPITSFTLEYRSVVSPTWTTAQRTSLIKSYILYDLA
EATWYELQMKVFNSAGSAEKRVKFATLSYDGSTIAPLVKAPTVSAGSTSSNEGLKMVTII
SCVLVGIVLVFVLLLVLRRRRREQRLKRLRDAKSLAEMLMSKNTRPADTINKQQQTMRMH
IDIPRAQLLIEERDTMETVDDRSTVLLTDNDFGETQKQKSSTVTHTVHYQSLSQATGPLV
DVSDARPGTSKSNPTARRTAKAGPAARNRYASQWTLNRPHPPVSAHTLSTDWRLPTPRVA
GSVDKESDSYSVSPSQDTDRARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITE
CFISDTSSEQMTAGTNDYTDSLTSSTPSESGICRFTASPPKPQDVSRVMNMAVPKAHRPG
GELVHLPPYLRMDFLLNRGMSCTGTGGRGGAGGEGAMGQACLEPQKSRSLKRPSRMAPPT
PTEAPQATSRASSRDPVPQWQPGSAATLPHREGSELAQAAKLSTSQESLLDSRGHLKQTN
NPYAKSYTLV
NT seq
6153 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggctgtcatctttttccagtgcatcttgaatgttttcagtgaagattta
cgttccagcttatattttgtcaatgcatctgtgcaagaggtagtgtttgccagcaccaca
gggacctcggtgccctgtcccgccgcgagcgtgccccccgcctcgctgcgctggtacctg
gccaccggagaggagatctacgatgtccccgggatccgccacgtgcacccaaatggcacc
cttcagatcttccacttcaacccctccagcttcagcaacctcatacatgacaacacctac
tattgcactgcggagaacccctcagggaaaatcaggagccaagatgtccatattaaggct
gttctacgagagccctacacggttcgcgtggaggaccagaaagccatgagaggcaatgtg
gcagtgttcaagtgcattatcccagcctcagtggaggcctacatcaccgttgtgtcctgg
gaaaaagacacagtgtcaatcaacatccagacgcctcggttcctcatcacctccacggga
gccctgtacatcttggacgtgcagaatgaggatggattgtataactacaggtgtatgacc
cgccaccgctacacaggagagaccaggcagagcaacagcgcacgcctctttgtgtcagac
ccctccaactcggggccggtcatcctggatggttttgagcgtcgcgaggtgatgacatca
caccgggtggagctgccgtgcaaggcgtctggtcacccggccccgaagtaccgctggctg
aaggacaaccgtccgctagagccggacagccgcttcaggcagagtgtgacgggcctgttg
atagagagggcgcagcccagcgacaagggaagctacgtgtgtgaagtgtggaacagctat
ggcaatgcagaggtggtggggaggctgcaggtcaaagagcccctgaaggcagtggttagc
ccgaggaaggtgaaaggcagcgtaggtagccaggtgtctctgtcgtgcagcgtgagtggc
tcggaggagtacgacctgtcctggtaccggaatggagaaattatctaccctgggaacagt
gttcgtatgactggcaacaaccgggagaacctggtcatggctgggatggctaagagtgat
ggaggagcctaccagtgcttcgctaggaaaggcaagatgtccgcccaggactttgtccag
gtcattctggaagacggcacgcccaagataatctcttccttcagtgagaaagtgtttgga
accaacgagtttgtgtcactgttctgcacggtgaaaggcacaccagagcccagggtgatg
tggacgctggacgacgagccggtgatcagggactcccgccaccgcatcggccactacacc
gaccaggagggccatgtgatcagccacctgaacatcagccagacaacagggccagacggg
ggtgtctaccggtgcatctgtaacaattcggccggggcggtatcctaccaggcgcgaata
aacgtaagagggcctgccagcatacgaccaatgaaaaacctcaccgccattgctgggcgg
gacatgtacattcactgccgcgtcattggctacccgtactactccatcaaatggcacaag
gacgccaacctgctcccctataaccaccggcagcgggcatttgagaacaatggcacgcta
aagctgtatgatgtacagaaggatgtggatgagggagagtacacgtgtagcgtgctggtc
tcaccttctctctccaccagccaaagtgtgcatgtcagtgtgaaagttccccccaccatc
catcccttcgagttccctcgtttctctattggccaacgtgtgttcattccgtgcgtggtg
atgtcaggtgatcagcctgtcttcatcacctggcagaaggacggtcggccaatcccggcc
agcctcggcgtaacgatcgacaacatagacttcaccagctccctacgtatctccaacctg
tctctcctgcacaatggcaactacacctgcatcgcacgcaaccaggccgccaccgtggaa
caccagagtcagctcatcgtcagggttggagtggatccaaatcaacctaccactaggcct
atgttggtccctccaaagtttgtggtgcagcccaaggaccaggacggcatctatggaaaa
gctgtgatcctcaactgctctgcagagggataccccgtccctaccatagtgtggaagcac
tccaaaggtgcgggggttccccagttccagcctatagccttgaactcgggcttccgtatc
caggtactggtcaacggctctctgctcatcaaacatgtgctggaggaggacagcggctac
tacctgtgtaaggtcagcaatgacgtgggagctgatgtcagcaagtccatgtacctcaat
gtcaaaatcccagccatgatcacgtcgtaccccaacaccacgctggccacgcagggcagt
gagaagaggatgagctgcacggcccacggggagaaacccatcatggtgcgttgggagaag
gaagatcgcatcatcaacccagagagcagccaccgctacgtggtcaccgtcaaagaggtg
gccgatgaggtcatctccaccctgcagatccggcctacagggagggaagactctggcttc
ttctcctgccatgccatcaactcctatggtgaagacagagggatcattcagctaacagtg
caagagcccccggaccctcctgaggtggagatcagagaggtgaaggacagaaccatcgcc
ctccgctggaccatgggctttgatggaaacagcccaatcacaggcttcgacattgagtgc
aagaacaaatcaggctcctgggaaacagcccaaaggaccaaagatgtgtctccccagctc
aaccaggccaccatcatagacctgcacccctcctccacctacagcatccgcatgttcgcc
aagaaccacatcggcaagagtgaggccagcaatgaactcaccataaccacagacgaagca
gcccctgatggtcccccacaagatgtgcagcttgaagctttctcctctcagagcatcaaa
gtctcctggagagctcctaagaagcacctccagaacggagcgatccgaggctaccaggtg
ggctacagggagttcagctctgggggaaactaccagtttaatgtcatcaccatggagacg
acgggggacaacgaccacagtgagagcatcaccctggacaacctgaagaagttcacccag
tatggggtggtggtgcaggccagcaacagcgctgggactggaccctcctcccaggaggtc
atctctaccacactggaggatgttcccagccgacctccagagaacgtccaggccacggcg
gcgtccccagaggttatctctctgtcctggctgacccctcctaaagatgccctcaacggc
atcctgcttggcttcagagtcatctactgggccaacctgccagacggagagctgggggag
atccgtaacgtgaccacctctaagccatctctggagctggatggtctggagaagtacact
aactacagcatccaggtgctgaccttcacccgggcaggggatggggtgcgcagtgagcag
atcttcacccgcaccaaggaggatgtccctggtcctccggctggcgtgaaggcagcggca
gcatctaactcagtggtgtttgtgtcgtggctccctcctctcaaactcaacggcatcatc
aggaaatacactgtcttctgctctaacccacaccccacggtgagcagtgagtttgaagca
gctccagacatcttcttctaccgtatccccaacctgagcaggaaccgtcagtacagcatc
tgggtggtggccgtcaccgcagccggccgcggaaacgccagcgacatcatcaccatcaag
cccctggccgaggctcctgctcagattctgacgttcaacggcaccgtgaccacaccctgg
atgagggacatcgtgttgccctgtaaggcggtgggcgacccagcccccacggtcaagtgg
ctcaaggagatcaacggaagccccacccctgctgtgattgacagtagacgcatcatccag
ggcaatggcagcctagccatccgcacagtgaaagctgaggattctgggaactacacctgt
gtggctagcaacagttttgggccagataaaatcatcctcaacctgcaggttcaagttcct
ccagaccagcctcgtcttaccgttaccaagacgaccaccacatctatcactctgtcctgg
ataccaggagacaacggaggcagctccatcagaggctacatcctgcaatactcagaggac
aacagtgagcagtggggcaactttgccatcagccctagtgagcgttcctatcgcctggag
aacctgaagtgtggcacctggtacaaatttacactgacagcacagaatgctgtggggcca
gggcgaatcagtgagatcatcgaagctaagactcatggaaaagaaccccagtactctaaa
gaacaggagctcttcaccagtatcaatgccacgcgtgtcaagctcaacctgattggctgg
aacaacggcggctgtccaatcacatccttcacgttggagtaccgttcggtggtgtctccc
acatggaccaccgcccagcgcacctctctgatcaagagctacatcctgtatgacctggcc
gaggccacctggtacgaacttcagatgaaggtgttcaacagcgccggctcagcagagaag
agggtcaagttcgccacactcagctacgacggcagtaccatcgctcccctggtgaaggcc
ccgacggtgagtgcgggcagtacgtccagtaacgagggtctgaaaatggtgaccatcatc
tcatgtgttctggtgggcatcgtgctggtcttcgtcctgctacttgtcctcaggaggcgg
aggcgggaacagagactgaagaggcttagagatgctaaaagtttagccgagatgctgatg
agtaaaaacacacgacctgcagacaccatcaacaagcagcagcagaccatgagaatgcac
atcgacatcccccgagcccagctgctcatagaggagagagacaccatggagacagttgat
gacaggtccacagtgctactgactgacaatgactttggggagacccagaaacagaagtcg
tctacggttacccacactgtccactaccagtccctgtcacaggccaccggacctctagtg
gatgtatctgacgctaggccaggaaccagtaagtccaaccccacagcccgccgcacagcc
aaagcaggccctgccgcacgcaaccgctacgctagccagtggaccctgaaccgaccacac
ccgccagtctcggcccacaccctgagcactgactggaggctgcccacgccacgggtggcc
ggatctgtggataaggagagtgacagctacagtgtcagcccatctcaggacacagaccga
gcgcggagcagcatggtgtccacagagagcgcgtcatccacctatgaggagctggcgcgg
gcctacgagcacgccaaaatggaggagcagctgcgccacgccaagttcaccatcacagaa
tgcttcatctcggacacgtcttcggagcagatgacggcaggcaccaatgactacacagac
agcctgacctccagcacgccctccgagtcaggcatctgcaggttcaccgcctccccgccc
aagcctcaggacgtcagccgagtcatgaacatggccgtgcccaaggctcacagaccgggg
ggcgagcttgtgcacctgcctccttacctgcgcatggacttcctgctgaaccggggcatg
tcgtgcacgggtactggagggaggggtggtgccgggggggagggggccatgggtcaggcc
tgtctggaaccccagaagagtcgctccctgaagcggccgtcgcgtatggcgccccctaca
cccacagaggccccccaggccaccagcagggccagcagcagggacccagtgccccaatgg
cagcccggctcagccgccaccctgccccacagagagggctcagagctggcccaggccgcc
aagctcagcacctcccaggagtccctactggactcacgaggacatctcaaacagaccaac
aacccctacgcaaagtcctatacgctagtataa
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