Oncorhynchus keta (chum salmon): 118391233
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Entry
118391233 CDS
T09424
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118391233 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118391233 (chrne)
Ion channels [BR:
oke04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
118391233 (chrne)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
118391233
NCBI-ProteinID:
XP_035638303
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Position
12:complement(28542034..28553913)
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AA seq
523 aa
AA seq
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MNFAMARHSFWTCLIATAGLLWGVTIPVSCNEESKLIGDLFRGYNKNIRPAAHPTDKVEV
QVKLILTNLISLNEKEETLTTNVWIEIQWNDIRLAWNTSEYFGIEVIRVPYNTVWLPDIV
LENNIDGKFDVAYYANVLIYSSGYMYWLPPAIYRSTCAIEITYFPFDYQNCTLVFRSQTY
SANELEIMLAVDTETEQPIEWVDIDPEAFTENGEWAIKHRPARKLINSRYTPDDLEYQEI
SFNLVIQRKPLFYIINIILPCSLISSLVVLAYFLPAQAGGQKLTVSISVLLAQTVFLFLI
AQKVPETSLNVPLIGKYLIFVMSVTTLIATNQIVVLNISLRSPNTHTMSHTIKHVFLELV
PRFLGMDPLVDDGEAEAEVNGVRERRRSSFGLMQRAEEYVLKQPRSEMMFDKQRERHGLT
RSVVDGIDVSTTASLYKSLAQAAPEIKECVDACNFITESTKQANDIGSEMESWVLIGKMI
DKVCFWVAMALFSIGTVAIFLTGHFNSVPDFPFPGENKRYLPS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgcgatggcaaggcactccttttggacgtgtttgattgcaactgcaggccta
ctctggggtgtgacaataccagtgagttgtaatgaggagtctaagctgattggggatctg
ttcagaggctacaacaagaacatccgtccagcggcgcaccccactgacaaggtggaggtg
caggtcaagctgatccttaccaacctcatctccctgaacgaaaaggaagagactctcacg
actaatgtctggattgagatccaatggaatgatattcgcctggcctggaacacctctgag
tattttggcatcgaggttatccgtgtgccttacaacacagtgtggcttcctgacattgtc
cttgagaacaacattgatggcaagtttgacgtggcctactatgccaatgtgttaatctac
tccagtggctacatgtactggctgcctccagctatctaccgcagcacatgtgccatagaa
atcacctacttcccctttgactaccagaactgcactttagtctttaggtcccagacttac
agtgcaaatgagttggaaatcatgctggctgttgacacggagactgaacagcccattgag
tgggtggacattgatcctgaggccttcactgagaatggtgagtgggccataaagcaccgg
ccagccaggaagctgatcaactcacgctacactcctgatgacctggagtaccaggagatc
tccttcaacctggtcatccagaggaaacctctgttctacatcatcaacatcattctgccc
tgctcacttatctcctccttggtcgtcctggcctacttcctacctgcacaggctggggga
cagaagttgactgtgtccatctctgtcctgctggctcagactgtcttcctctttcttatt
gctcagaaggtccctgagacatctctcaatgtccctctcattggcaagtacctgatcttt
gtcatgtctgtgacaacactcatcgccaccaaccaaatcgtggtgctcaacatctccctc
cgcagtcccaacacccacaccatgtctcacactatcaaacacgtcttcctggagcttgtc
ccccgattcctgggtatggaccctctggtggatgatggagaggcggaggcggaggtgaat
ggagtgagggagcgacggcgtagctcgttcggcctgatgcagagagcggaggagtatgtg
ctaaaacaaccacgcagcgagatgatgtttgacaaacagagagagaggcatggcctcaca
cgatccgttgtggatgggattgatgtgagcaccacagccagcctgtacaagagcctcgcc
caagctgctcctgaaatcaaggaatgtgtggatgcttgtaactttatcactgagagcaca
aagcaagcaaatgacattggatcagaaatggagagctgggtattgattgggaagatgatt
gacaaggtttgtttctgggtggccatggctctcttctccatcggaacggtcgctatcttc
ctcacgggacatttcaactctgtcccagattttccattccctggggaaaacaaacgatac
ctccccagttag
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