Oncorhynchus keta (chum salmon): 118391242
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Entry
118391242 CDS
T09424
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118391242
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118391242
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
118391242
NCBI-ProteinID:
XP_035638319
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All DBs
Position
12:28848952..28857375
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AA seq
1146 aa
AA seq
DB search
MENLTPEQWREIVNKKMRFPLELISAIQEGNIVMVCGLLNTGDGIIRQLDDSEDRLWREA
LNLSIRLGNEDTMDALLQGIKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSLAIFDHSIDDSQFAPGVTPLTLACQKDLYEIVTMLTQKGHIIPRPHKISCACLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSITSEDAMLSAFGLSRELRKLSKKEPEFKPQYL
GLEELCQEFAVELLGMCRNQSEVTTILNSCGDESQDALDQQAFEEGIPNLTRLRLAVNCN
QKQFVAHPICQQVLSSIWCGNLSGWRGSKTAWKLLVSVGIFFTMPLLCLVYWIAPKSKVG
KILKIPVIKFLLHSASYMWFLITLLGESITMELYRDQFASRQQNILHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCMDMMVLSMYLASFTLRVLIMLKGHFLCQAPDGTEECAYF
TQTVRQDWHQEDPQLIAEVLFAVTSMLSFTRLAYILPAQESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNIYVPYVTQPYLGRFNETFRFLFWTMFGVANQDYVDMPEFVVAEF
VGRILYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAFFYLIRGIFRQICCCCTLNSTPDYPPITSMSNGKEVDGGGSGENQIPYRQ
QVIRALVQRYIESERRKFEETKRKDVGNRITELNKVVGRLHAEMKAIMQVLVDSGQAAGD
IPNTDGSSILGKYIMGAKNNFRGFDNRLDNKHTPLRVTVEVGQQGKVAEEKAGAVVMLDD
KGMEVEHDRKVEIGKDGRTAMGLDKTVEMEKEAKDGGMVVKQEVKVDVGLDGAEGTKQVG
DMDVVKMEEGRADGRKGERRVEEVVKESEQNMENGGKGEVRVEEMVKETEHKMERRGNSD
GKGEKGINKARTNEMVEKRVEGEASKAEVRMEVKDKGKKVDSCVDNTIRDKGVVGGDKTV
NEMGGCGNEGKVDMGLEDVKEVERKVKAMELKEKRVVGKINVAERWNKGEGRAVEENVTE
RKAAKAGMVVVENTARAGVNILGEKVVPSPTGSSSSQDTGFGSQEGEGSINGGPMRPAYL
SASSPD
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacaccggagcaatggcgggagatagtgaacaagaagatgcgcttccct
ctggagctgatcagtgccatccaggaggggaacatagtgatggtgtgtggcctgctgaat
actggtgacggtatcatccgccagctggacgactccgaggaccggctgtggagagaggcc
ctgaacctgtccatccgcctgggcaacgaggacaccatggacgccctcctccagggcatc
aagtttgacttccgccagatccatgaagctctgctggttgccgtggacaccaaccagccc
cgcgtggtgaaaaggctcctcgaccgcctggaccaggagaagggcaacaagatggatgtg
cgatccttctccctggccatcttcgaccactctatcgacgactcgcagttcgccccaggc
gtgaccccgctgaccctggcctgtcagaaggacctgtatgagattgtcaccatgctgacc
cagaagggccacatcatcccaaggccacacaagatctcctgtgcctgtctagagtgtagg
aacggacgccagtatgacctgctgaagttctccctgtctcgcatcaacacctaccgtggc
attgccagccgggcctacctgtccatcacctcagaggatgccatgctcagtgccttcggc
ctcagcagggagctacgcaaactctccaagaaggaacccgagttcaagcctcagtacttg
ggtctggaggagctgtgccaggagtttgcggtggagctgctggggatgtgccgtaaccag
agtgaggtcaccaccatcctgaacagctgtggagatgaaagccaggacgcccttgaccag
caggccttcgaggagggcatccccaacctgacccgcctgaggcttgccgtcaactgcaac
caaaaacagtttgtagcccaccctatctgccagcaggtgctgtcctctatttggtgtggg
aacctgtctggctggagaggcagcaagacggcctggaagctgctggtgtctgtgggtatc
ttcttcaccatgcccctcctctgcctcgtctactggattgcacccaagtccaaggtggga
aagatactgaagattccggtgatcaagttccttcttcactctgcctcctacatgtggttc
ctcatcacattgttgggagagtccatcaccatggagttgtacagagatcagtttgcttca
cgtcagcagaatattctgcacagctcattccacatggtgtgggtggtcgggttcttctgg
tatgaatgtaaggaggtgtggattgaaggtctgcggagctacttcctggactggtggaac
tgcatggacatgatggtgctcagcatgtacttggcctccttcactctgcgtgtcctcatc
atgctcaaaggtcacttcctgtgccaggcccctgacgggactgaggagtgtgcctacttc
acccagactgtgcgccaggactggcatcaggaggaccctcagctcatagctgaggtactg
tttgcagtgaccagtatgctgagcttcacccgcttggcctacatcctgcctgcacaggag
tccctgggtacactccagatctccatagggaagatgatcgatgacatgatgaggttcatg
ttcatattgatgattattggaactgctttcctctgtggtatcaataacatctatgttcct
tatgtcacccaaccatatcttggaaggtttaacgagacctttcgtttcctgttctggacc
atgtttggggtggccaaccaggactatgtggacatgcccgagtttgtggttgcagagttt
gtgggcagaatcctttacggcatcttcaccctggtgattgtgatcgtgctactcaacatg
ctcattgcaatgatcaccaactccttccagaagattgaggatgatgctgacgttgagtgg
aaatttgcccgatccaagctctatctgagttacttccgagaaggtctcactatgcctgtc
cccttcaacatcatcccctcacctaaggcctttttctacctcatacggggtatttttcgt
cagatctgctgctgttgtactttgaactcgacaccagactatccccccataacctccatg
tcgaacgggaaggaggtggatggtggagggtcgggggagaaccagataccttatcgccag
caggtgatacgggctctggtgcagcgctacattgagtctgaacgtcggaagtttgaggag
accaagagaaaagatgtgggtaatcggatcacagagctaaacaaggtggtgggaaggctg
catgctgagatgaaggccatcatgcaggttctggtggactctggccaggctgcaggagac
atccccaacactgatggctcatccatcctggggaaatacataatgggagccaagaacaac
ttcagggggttcgacaacaggctggacaacaaacacacacctctacgggtgactgtggag
gtgggacaacagggaaaagtagcggaagagaaggctggagcagtggtgatgctagatgac
aaagggatggaggtggaacacgacagaaaggtggagataggaaaggatggaaggacagca
atgggactagacaaaacagtggagatggaaaaggaggcaaaggatggagggatggtggtc
aaacaggaagtaaaggtggatgtggggctagatggagcagaggggacgaaacaggtagga
gacatggatgttgtgaagatggaggaggggagagctgatggaaggaagggagagagaagg
gtggaggaggtagtgaaggagtcagagcagaacatggaaaatggaggaaagggagaggta
agagtggaagaaatggtaaaggagacagagcacaagatggaaaggagaggcaacagtgac
gggaagggggagaaggggataaataaggcacgcaccaatgagatggtggagaaaagggtg
gagggagaggccagtaaggcagaagtaaggatggaagtgaaagacaaagggaaaaaggta
gatagctgtgtggataatacaatcagggacaaaggagttgtaggaggtgacaaaacagtt
aatgaaatgggaggatgtgggaatgaaggtaaagtagacatgggattggaagatgtgaaa
gaggtagagaggaaggtcaaagcgatggaactaaaggagaaaagagtggtggggaagatc
aacgtggcagagaggtggaataagggggaggggagggcagtggaggagaatgtgactgag
aggaaggctgccaaggctggcatggtggtggtggagaatactgccagggctggggtgaat
atcctgggggagaaggtggttccttccccgaccggcagcagcagctcacaggacactggc
ttcggctcacaagaaggggaggggtccatcaatggaggaccaatgagacccgcatatctg
agtgcatcatctccagattag
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integrated database retrieval system
