Oncorhynchus keta (chum salmon): 118391261
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Entry
118391261 CDS
T09424
Name
(RefSeq) cohesin subunit SA-2-like isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118391261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118391261
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
118391261
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
118391261
NCBI-ProteinID:
XP_035638367
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All DBs
Position
12:complement(29487940..29502524)
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AA seq
1272 aa
AA seq
DB search
MIAAQELHTEFQFPHETDTQLSSDTDLEDPDVKNAKLGKGKGGRKGKKAPGEKGKGGGVK
GTGLGGVNGHHQENGMESMTLFEVVKMGKSATQSIVDDWIESYKSDRDIALLDLINFFIQ
CSGCKGAVSAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPLWKKFKSSFCEFIGVLV
RQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDN
TQRQYEAERNKVMAKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIAE
VRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLRCLTALQGLYYNRELNTR
LELFTSRFKDRIVSMALDKEYDVAVQAIKLLTLVLHSSDEVLTAEDCESVYHLVYSAHRP
VAVAAGEFLYKKLFSHRGPEEEGMPRRGRQSLNGNLIKTTVFFFLESELHEHGAYLVDSL
WECAGELLKDWESMISLLLDEPMPGEEALTDHQETALIEIMLCAIRQACECHPPVGRGTG
KRVLTAKEKKTQLDDRTRITEIFAVALPLLLAKYSVDAEKVTNLLQLPQFFDLEIYTTGR
LEKHLESLLRQIREVVEKHTETDVLEACSMTYHSLCNEEFTIFNRVDIARSQLLDELVDK
FNRLLEDFLLEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFTSNYKLLNTGLQNGD
MPEQIVIHAMQCTHYIILWHLAKVSEGSSTKGNMVTLRKQMRAFCLMCQRYLTSVNTTVK
EQAFTILCDALMIFSHQIVSSGREQLEALIYTPDSPLQAELLNFILDHVFIDQDDDNNST
DGQQDDEASKIEALHKRRNLLAAYCKLIIYNVVEMNTGADIFKQYMRYYNDYGDIIKETM
SKTRQIDKIQCAKTLILSLQQLFNEMLSDLGCNFDRSSSSFCGIKELARRFSLTFGLDQL
KTREAIAMLHKDGIEFAFKEPSPQGEGNPPLNLAFLDILSEFSSKLLRQDKKTVHLYLER
FMTFQMALQREDCWLPLISYRNSLQAGGDDDTMSVISGYSSRSSSIRTKKAKPASTGKRK
LPEAEESSSCSTDAVWMNQEQNVQMPVMMPSPHLTSTVLRDPKKMRPEESYMGAYAMTSE
QQHQQLPPQQHHHQTPMDYNTQVTWMLAQRQQAEARQQQERASMQYAKMRSHMQNAIRRG
SGLMEDDEEPIVEDVMMSSEDRLEDLNEGMDFDTMDIDLPPSKNRRERSELKPDYFDPSS
IMDDSVLNVSMF
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagcacaagagttgcacacagagtttcagtttcctcacgagaccgatacacag
ttatcctctgacacagaccttgaggaccctgatgtcaagaatgcaaagcttgggaaagga
aagggtggaaggaaggggaagaaagcccctggagagaaggggaagggtggtggagtgaag
ggtactggccttggcggggtaaatggccatcaccaggagaatgggatggagagcatgacc
ctgttcgaggtggtgaagatggggaagagtgccacacagtccatcgttgatgactggatt
gagtcttacaagagtgatcgagacattgcactcctggacttgatcaactttttcatccag
tgctctggttgtaaaggtgctgtcagtgcagagatgttcagacacatgcaaaactctgag
atcatcaggaagatgacagaggaatttgacgaggacagcggggactacccgttaaccatg
gcagggccactgtggaagaagttcaagtcgagcttctgtgagtttatcggggtgctggtg
cggcagtgtcagtacagcatcatctatgacgaatacatgatggacacagtcatctcgctg
ctcactggcctgtctgactcgcaggtccgagccttcagacacaccagcacactggcagcc
atgaaattgatgacagccttggtgaacgtggctctgaacctgagcatcaacatggacaac
actcagaggcagtatgaggcagagaggaacaaggtcatggccaagagggccaatgatagg
ctagagctcctgttacagaagcgtaaagagcttcaagaaaatcaagacgaaattgaaaac
atgatgaatgcgatttttaaaggcgtgtttgttcacagatatcgcgatgctatagctgag
gtccgggcaatctgcattgaggagattggggtatggatgaagatgtacagcgatgctttt
ctcaatgacagttatctgaagtatgttggatggaccatgcatgacaagcaaggagaagtg
cgcctcaggtgtctgactgcgctccaaggcctgtactataaccgggagctcaacactcga
ctggagcttttcaccagccgcttcaaggaccgcattgtgtcgatggctctggataaggag
tatgatgttgcagtgcaagccataaaacttctgactcttgtcttgcatagcagtgatgag
gtcctgacagcagaggactgtgagagtgtctaccatctggtctactctgcccatcgacct
gtggctgtggctgcaggagagttcctctataagaagctcttcagccatcgaggtccagag
gaggaagggatgcccaggaggggcaggcagagcctcaacgggaacctcatcaagaccacc
gtcttcttcttcctggagagtgagctccatgagcacggggcctacctggtggacagcctg
tgggagtgtgcaggggagctgctcaaagactgggagagcatgatcagcctgctactggat
gagcccatgccaggggaggaagccctgacagaccaccaggagactgctctgatagagatc
atgctgtgtgccatccgccaggcctgtgagtgccaccctccagtgggcagaggcactggg
aagagggtcctgacagcgaaagaaaagaaaacccagctggatgaccggacgagaatcact
gagatctttgctgtggcgttgcctctgttgttggccaagtactccgttgatgctgagaag
gtgaccaacttactgcagctaccgcagttctttgacctggagatctacaccactggtcga
ttggaaaagcacttggagtcgttgctgcgtcagatcagggaggtggtggagaagcacaca
gagaccgacgtgctggaggcgtgctccatgacctaccactctctctgcaacgaagagttc
accatcttcaacagggtggacatcgccaggtcccagctactggacgagttggtggacaag
ttcaacagactcctggaggacttcctgctggagggtgaggaaccagatgaggatgatgcc
taccaggtcctgtccacattaaagaggatcactgctttccacaatgcacatgacctctct
aaatgggacctgttcaccagcaactataagctattaaacacaggacttcagaatggagat
atgcctgagcagattgtaattcatgcgatgcagtgcacacactacatcattctgtggcac
ctagccaaggtctcagagggcagctccacaaaggggaacatggtcaccctgaggaagcag
atgagggccttctgtctgatgtgtcaacgctacctcaccagtgtcaacaccactgtcaaa
gagcaggccttcaccatcctgtgtgacgccctgatgatcttcagccaccagatagtgtcg
tcgggccgggagcagctggaggctctgatctacactccagactcccccctacaggcagag
ctgctcaacttcatcctggaccacgtctttatcgaccaggacgatgacaacaacagcaca
gatgggcagcaagatgatgaagccagtaaaatcgaggctttacacaagagacgtaacctg
ctggcagcgtactgcaaactgatcatttacaatgtagtggagatgaacactggagctgat
atcttcaagcagtacatgaggtactacaatgactatggagatatcatcaaggaaacgatg
agtaaaacaagacaaattgacaagatccagtgtgccaagaccctcattctgagtttgcag
cagcttttcaatgagatgttatctgacctcggctgcaactttgaccgctcgtcgtcgtcc
ttctgcggcattaaagaactggcccgacgtttctcgttgacctttggcctggatcagctg
aagaccagagaggctattgccatgttacacaaggatggaatcgagtttgccttcaaggag
cccagtccccagggagagggaaaccctcctctcaaccttgccttcctggacatactcagc
gagttttcctccaaacttctccgtcaggacaagaagactgttcacctctacctggagcgg
ttcatgaccttccagatggccctgcaacgagaggactgttggctgcccctcatctcctac
aggaactccctgcaggccggaggggacgacgacaccatgtctgtcatcagcggctacagc
agcagaagttccagcatcaggaccaagaaggccaagccagccagcaccggaaagaggaaa
ctgcctgaagcagaggagagtagcagctgcagcacagacgcagtgtggatgaaccaggag
cagaacgtgcagatgccagtgatgatgccctcgccacatctaacctccactgtgctgagg
gaccccaagaaaatgaggccagaggagagctacatgggtgcctatgctatgacatcagag
cagcagcaccaacagctgcccccccaacagcatcaccatcagacccccatggactacaat
acccaggtgacctggatgctagcccagagacagcaggcagaggcccggcagcaacaggag
cgagccagcatgcagtatgccaagatgaggagccacatgcagaatgcaatccgccgcggt
tcaggactcatggaggatgatgaggagccaatagtagaggatgtaatgatgtcatcagag
gaccgtttggaagatctcaacgagggcatggattttgacactatggatattgatctgcca
ccatctaaaaatcgccgagagagatcagagctgaagccagactacttcgatccttcttcg
atcatggatgattcggtcctcaatgtttcaatgttctaa
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