Oncorhynchus keta (chum salmon): 118391262
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Entry
118391262 CDS
T09424
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00061
Fatty acid biosynthesis
oke00071
Fatty acid degradation
oke01100
Metabolic pathways
oke01212
Fatty acid metabolism
oke03320
PPAR signaling pathway
oke04146
Peroxisome
oke04216
Ferroptosis
oke04920
Adipocytokine signaling pathway
Module
oke_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
118391262
00071 Fatty acid degradation
118391262
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
118391262
09143 Cell growth and death
04216 Ferroptosis
118391262
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
118391262
03320 PPAR signaling pathway
118391262
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
oke01004
]
118391262
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118391262
Enzymes [BR:
oke01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
118391262
Lipid biosynthesis proteins [BR:
oke01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
118391262
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of breast milk
118391262
Exosomal proteins of breast cancer cells
118391262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
118391262
NCBI-ProteinID:
XP_035638371
LinkDB
All DBs
Position
12:complement(29513692..29534567)
Genome browser
AA seq
710 aa
AA seq
DB search
MRFKVDMHYIVFSPVYLLMWLYTLITFIPWYFLTDAGKKKTMAKREKAKSTTGKAEGPYR
CVENFDNLAREDFEGKDTLDKLFEHAVQRFGNTDCLGTRELLNEENERQPSGKIFKKLIL
GEYRWLSYDEVDQIISHLGSGLAALGQQPKSTIAIFCETRAEWMITAQACFRRNFPLVTL
YATLGEEAVAYGLNECGATHLITSTELLETKLKSILPEMHNLKHVIYVDNKSIRRTGYPE
GIQIHSMQAVQELGAKPDNLSIAVQRPQPTDLAVVMYTSGSTGQPKGVMIIHSNLIAGMT
GQCERIPGLGPKDTYIGYLPLAHVLEMTAEISCMTYGCRIGYSSPQTLSDQSTKIKKGSK
GDCSVLGPTLMAAVPEIMDRIYKNVMNKVQEMSYVQRTLFKLGYNYKLEQIKMGYDAPLC
NLLLFKKVKAQLGGNIRMMLSGGAPLSSATQRFMNICFCCPVGQGYGLTETCGAGTITEV
ADYSTGRVGAPLICCEVKLRDWVEGGYTSQDQPHPRGEIMIGGPNVTMGYYKSEHLNNDF
WVDEQGQRWFCTGDVGEIHPDGCLQIVDRKKDLVKLQAGEYVSLGKVESALKNCPLIENI
CAYANSDQNYVISFVVPNQKQLTILANKNGISVAWEEICNHPAMEKEVLKAIKEVATSIK
LQRFEIPVKVRLSPEPWTPETGLVTDAFKLKRKELKNHFQTDIERMYGGK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcaaagtagacatgcattacatagtgttctcgcctgtgtacctgttgatgtgg
ctgtacacgctcatcacgtttatcccatggtatttcctcactgatgctgggaagaagaaa
accatggcaaagagagagaaagcgaagtccaccacaggcaaagcagagggcccctatcgt
tgtgtggagaactttgacaacctggcccgggaggactttgagggaaaggacactctagac
aagctgtttgagcatgcagtgcagcgcttcggcaacacagactgcctgggcaccagggag
ctcctaaatgaggagaacgagaggcaacccagcggcaaaatctttaagaagctgatcctg
ggggagtacaggtggctgtcctatgacgaggtggaccagataatcagtcatctaggtagt
ggactggcagccctgggccagcagcccaagagtaccatcgccatcttctgtgagacacga
gcagagtggatgatcactgcacaggcctgcttcagacgcaactttccattggtcactctg
tatgccaccctgggggaggaggcagtggcctatggcctgaatgagtgtggggccactcac
ctgatcaccagcacagagctactggagactaaactcaagagtattttgccagaaatgcat
aacctgaagcacgttatctatgtggacaacaagagcatcagaaggacgggttacccagag
ggcattcagatccacagcatgcaggcagtacaagagctgggagccaaacctgacaacttg
agtatagctgtgcagcggccccagcccacagacctggctgtggtcatgtacaccagcggc
tccacaggacaacccaaaggagtcatgatcatccacagcaatcttattgctggcatgacg
ggccagtgtgagaggatcccaggcctggggccgaaggatacctacattggctacctgcct
ctagctcatgtgctggagatgactgctgagatctcatgtatgacgtatggctgcaggatt
ggctactcttccccacaaacactctctgaccagtcaacaaaaatcaagaaaggcagtaag
ggagactgctctgtgttggggcctactctgatggcagctgttccggaaataatggaccgc
atctacaagaatgtgatgaacaaggtgcaggagatgagctatgtgcagaggactctgttt
aaactgggctacaactacaaactggaacagatcaaaatgggctatgatgcccctctctgc
aacttgctgctgtttaagaaggtgaaggctcagctgggagggaacatcaggatgatgctg
tcaggaggggcacccttgtcctccgccacacagcgattcatgaacatctgcttctgctgc
cctgtgggacagggctacggcctcacagagacctgcggagcaggtaccatcacagaggtg
gcagactacagcactgggagagtaggagcccccctcatctgctgtgaggtcaaactacga
gactgggttgagggcggatacaccagtcaggaccagccccacccgcgtggagagatcatg
attggtgggcccaacgttaccatgggttactataagagtgagcacctgaacaatgacttc
tgggtggatgagcagggccagaggtggttctgtaccggggatgtgggggagattcaccct
gatggctgtctgcagatagtggaccgtaagaaggacctggtcaaactgcaggctggagaa
tacgtgtccttggggaaagtggagtctgctctgaaaaactgcccccttattgaaaacatt
tgtgcatatgcaaacagtgaccagaactatgtgataagctttgtggtgccgaaccagaag
cagctgacaattctggccaataagaacggcatcagtgtcgcctgggaggagatctgtaat
caccccgccatggagaaagaggtcttgaaggccatcaaagaggtggctacctcaatcaaa
ctgcagcgttttgagatcccagtgaaagtgcgtctgagcccagagccctggacccctgag
actggcctggtgacggacgcattcaaactgaaaaggaaggagctgaagaaccacttccag
actgatatcgagagaatgtacggagggaagtag
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