Oncorhynchus keta (chum salmon): 118391303
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Entry
118391303 CDS
T09424
Name
(RefSeq) nuclear pore glycoprotein p62-like isoform X1
KO
K14306
nuclear pore complex protein Nup62
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118391303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118391303
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118391303
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
TP0873_N
Motif
Other DBs
NCBI-GeneID:
118391303
NCBI-ProteinID:
XP_035638453
LinkDB
All DBs
Position
12:30787254..30796228
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AA seq
578 aa
AA seq
DB search
MSGGFNFGQASSTGFSFGAPKTTAATAPATGFGMPSAAAPGGGFSFGTPSTPQAPVAAPQ
SSGLFAMPTQGSTNPTGGFSFGTPAQSSTPAGGGFSFGTPIAKLNLGTPVASQPALTGLT
MGMATPSGTGFGLGGGLATQTTAAPAGGGFSFGTAGGLGAPVAQTQPQTQPAAAGGLSLG
TPAEAVQIMGGGFSFGAAKVQATTAPAPTVTVGGGFSFGNSTPASLSLGTQPTSLTLNSV
ASTAVPTTTQVGGFAFGVKPSATPAPTAAAPATQASLGSSLFAVPASTAAPASAAITGFL
GAAPTSAAPAATSTAGSTLGFMLKPLGAVTATTTAPVGTAAPTTTTGFSLAMKPAGSIGI
GVTAPITGVATTIATVTASAPPVMSYIQLEGLINKWSLELEDQERHFLQQATQVNAWDRT
LVENGEKITSLHREMEKVKLDQRRLDQELDFILSQQKELEDLLSPLEESVKEQSGTIYMQ
NADEERERTYKLAENVDAQLKRMSQDLKEIIEHLNTSSGPADNSDPLQQICKILNAHMDS
LQWIDQNSVLLQRRVEDVSKLCDNRRKEQEKTFRIAFH
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaggcttcaactttggacaagcgtccagtactggattcagctttggagctccc
aaaaccacagctgcaactgccccagccacaggctttgggatgcctagtgctgcagctcca
ggtggtggcttctctttcggaacccccagcactccgcaggccccagtagctgccccccag
agctctgggctgtttgctatgcccacccagggtagcacaaacccaactggagggttcagc
tttgggacccctgcacagagcagtactcctgcaggaggaggcttctcttttgggactccc
attgctaaactcaatctgggtacaccagtcgcctctcaacctgcactgactgggctaact
atggggatggcaaccccctctgggacaggctttgggcttggtgggggtctcgccacacaa
accactgctgcccctgcaggaggggggttcagctttgggaccgcaggggggcttggagcc
cctgttgcccaaactcagccccagacccaacctgctgcagctggtggactctctttagga
actcctgctgaagccgtccaaattatgggaggtgggtttagttttggtgcagccaaggtc
caggccaccacagccccagcccctactgtaactgtaggagggggcttctcatttggaaac
agcacacctgccagcctctccctggggacccagcccacaagtctgactctgaactctgtg
gcctcaacagctgtaccaaccacaacccaggttggaggattcgcttttggcgtcaaacct
tctgctactccagccccgactgcagctgccccggccacccaagcctcattaggttcttct
ctttttgctgtaccagcatcaacagcagctcctgcttcagcagcaatcacaggatttttg
ggcgctgcccctacctccgctgccccggctgccacctcaacagcgggaagtaccctgggc
ttcatgctcaaacccctgggagcagtcactgccacaactactgccccagttggcacagct
gcccctaccacaacaacaggtttctcactggctatgaaacctgcgggctccattggcatt
ggtgtaacggcccccatcactggcgtagccacaaccattgctactgttacagcaagtgct
cctccagtgatgtcatatatccaactagagggtctcattaacaagtggagtcttgaactg
gaggaccaggagaggcatttcttacagcaagccacccaggtcaacgcctgggaccgcacg
ctggtggagaacggagagaagatcacatcactgcacagggagatggagaaagtgaaattg
gaccaaagaaggctggaccaggaactggacttcatcctgtcacaacagaaggagctggag
gacctgctgtccccactggaggagtctgtcaaagaacagagtggaaccatctacatgcag
aacgcagacgaggaacgcgagaggacgtacaagcttgcagagaacgtggacgcccagctg
aagaggatgtcccaagatctaaaggagatcattgaacacctgaatacatccagcgggcca
gctgataacagtgacccgcttcagcagatctgtaaaattctcaatgcccacatggactct
cttcaatggattgaccagaactcggtgcttctacagagaagggtggaggatgtgtccaaa
ctctgtgacaaccgacgcaaagagcaggagaagacttttcgcatagcatttcattga
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