KEGG   Oncorhynchus keta (chum salmon): 118391322
Entry
118391322         CDS       T09424                                 
Name
(RefSeq) probable ribonuclease ZC3H12B
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oke03019]
    118391322
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     118391322
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C KH_N4BP1_1st zf-CCCH_2 zf-CCCH_4 UBA_N4BP1_C
Other DBs
NCBI-GeneID: 118391322
NCBI-ProteinID: XP_035638491
LinkDB
Position
12:31491266..31498763
AA seq 973 aa
MVLELAVPANAGPLLHRSIQHIERIFRVRVSYGSAESNCDSANVSTSNIIIVRVGEGEED
DCTKAKDYIVSLISPAHRKRERLTLALHIQLAALKSAIEYDSQAVVEVREHVVDISGGER
NVMTAWSMVEKIKMEKHPCREEAPELTEAQQPSGESEEGSSSESESEEQHQLQLNSGGCK
RKESFSATKPHRQLCRSPCLDRPSFSQSCTLPELRIEDTKATAVLKHASDKEYQTKMEFA
LKLGYSGEQVETVLNKLGAGALINDILAELVRLGNKGEPEVQASSNTGTFVSRGGPCVKE
AVSPEVSLEDDSVDPYDNLRPIVIDGSNVAMSHGNKEVFSCLGIQLAVDWFVEKGHKDIT
VFVPAWRKEQSRPDAPITDQDILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLACDS
DGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRP
VVPEHKKQPCPYGKKCTYGHKCKYYHPERANQPQRSVADELRAFAKLSAVKTMSEGALAK
CGTGPTTAKGDSGSEAKRVAPKRQSDPSIRSVACEPEERLSAVRKPEANSVPSLVSALSV
PTMQPAKSHGAGALNTRSASSPVPGSLQFTHSSLEHMSSVQYPHPPILVTNSHGASVTYS
EQFPKYDSVSTDHGYYSMLSDFSNMSMSSMHNVDSFCSMEHEHGIYQRNPSQHCPEPCLS
HSNSDSFSSYGELYMSSVDSSLDESIKGQQSPAQSRLQAFSHGGFHHEALTRVQSYGPEQ
PKQGPSRKQSISHLAPHVQHPAVGARSSCPGDYPLPQNVLPSQSSQPGRSLGMTRMDSIS
DSRLYESNPMRQRRPPLCREQHASWDPLPCGSESYGYHSYPLSNSPMQPCCERVMVRSMP
DKMEQIWRSPWENPPQAEHQERHVIPEHQYQTYRNLCNIFPAFVVHSVMEKNPHLTDPQQ
LAAVIVTKLRSCH
NT seq 2922 nt   +upstreamnt  +downstreamnt
atggttttggagctggcagtgcccgcaaatgcaggcccattgcttcaccgctccatccag
cacattgagcgtattttccgggtgagggtcagctacggatccgctgagtcaaactgcgac
agcgcaaatgtcagcaccagcaatataatcatagttcgtgtcggagagggcgaggaagat
gactgcaccaaggcaaaagattacatagtgtccttaatttcgccagctcaccgaaagagg
gagcgtctaacgttggctttacacatacagctggctgcgctgaagtcagccatcgagtat
gattctcaggctgtggtggaggtgagggagcatgtggtggacatctccggtggcgagagg
aacgtgatgactgcatggtcgatggtggagaagatcaaaatggagaaacacccatgcagg
gaagaggcccctgagctgactgaggcccagcagcccagtggggagtctgaggagggaagc
agctcagagagcgagtcagaggagcagcatcagctgcagctgaacagtggcggctgtaag
aggaaagagtccttcagtgccaccaagcctcaccggcagctctgtcgctctccatgcctg
gaccggcccagcttctcccagagctgcactctaccagagctccgcattgaagacaccaag
gccactgcagtgcttaaacatgccagtgacaaggagtaccaaaccaagatggagtttgcc
ttgaagctgggatactcaggtgaacaggtggagaccgtgctgaacaagttaggggctggt
gcccttatcaatgacattctggctgagcttgtaaggcttggtaataaaggagaaccggag
gttcaagccagcagtaacaccggcacgttcgtctcccgtggaggcccctgtgtcaaagag
gctgtcagtccagaggtgtcacttgaagatgattctgtggatccttatgataatctcagg
cctatcgtcattgatggatcgaatgtggcgatgagccatggaaacaaagaggtgttctct
tgccttggtatccaattggctgttgattggtttgtggagaaaggacacaaagacatcaca
gtgtttgttcctgcctggaggaaagagcagtcgagacctgacgcccccattacagaccaa
gacattttgcggaagctagagaaagaaaagatcctagtgttcaccccatctagaagagtc
caaggaaggagagtggtgtgctatgatgatcgcttcatagtgaagctggcctgtgactct
gatggcattattgtgtcaaatgacaactacagggacttacagaatgagaagccagagtgg
aagaagttcatagaggagcgactgctgatgtactcatttgtcaatgataaattcatgcca
cctgatgatcctttaggaagacatggtccaagtttagagaatttcctccgcaagcgtcct
gttgttccagagcacaaaaagcaaccctgtccatatgggaaaaaatgcacttatggacat
aagtgcaagtactatcacccagagcgtgcaaaccagcctcagcggtcagtggctgatgaa
ctgagagcgtttgccaagttgtctgctgtaaagacaatgagcgagggggccctggccaag
tgtggcactggacccaccacagctaagggggacagtggctctgaggctaaacgtgtggcc
cccaagcgccagtctgatcccagcatccgctcagtggcctgcgagccagaggagagactg
tctgctgtccgtaagcctgaggcaaattctgtgccttccctcgtgtctgccctcagtgtg
cccaccatgcagcctgctaagagccacggggctggtgccttgaacactcgatcagccagc
agcccagtacccggctccctccagttcacccacagctccctggaacacatgtctagtgta
cagtacccacacccacccatcctagtcaccaacagccatggtgcttctgtcacttacagt
gaacagtttcctaaatatgattctgtgagcacagaccatggatactactctatgcttagt
gatttttctaacatgagcatgagcagcatgcacaacgtggacagcttctgtagcatggag
catgagcatgggatttatcagcgaaatcccagccagcattgccctgagccctgcctcagc
cactcgaacagtgactccttctcctcttatggggaattatacatgagctcagtggacagt
agcctggatgagagcataaaggggcagcagtctcctgcacagagcagactccaggccttc
tcccatggggggttccaccacgaggccctgacccgagtgcagagctatggccctgagcag
cctaagcagggtccaagcaggaagcagtccatatcccacctggcaccgcatgtccagcac
cctgctgttggggccaggtccagctgcccaggggactaccccttacctcagaatgtcctc
ccgtcacagtcctcacaaccgggacgctccctgggcatgacacgcatggacagcatctca
gactccaggctgtacgagagtaaccccatgaggcagcggagacccccactgtgccgcgag
cagcatgccagctgggatccgctgccctgcggcagtgaatcctatggataccactcgtac
cccctgagtaacagcccgatgcagccgtgttgtgagcgggtgatggtccgcagcatgcct
gacaagatggagcagatctggaggtctccgtgggagaacccgcctcaagccgagcaccag
gagcgccatgtcatcccagagcaccagtaccaaacataccgcaacctctgcaacatcttc
cctgctttcgtggtgcactctgtcatggagaaaaaccctcatctaacggacccacaacaa
ctcgctgctgtcattgtcacgaagctgaggtcttgccattaa

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