KEGG   Oncorhynchus keta (chum salmon): 118391368
Entry
118391368         CDS       T09424                                 
Name
(RefSeq) roundabout homolog 1-like
  KO
K06753  roundabout, axon guidance receptor 1
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oke04515]
    118391368
Cell adhesion molecules [BR:oke04515]
 Immunoglobulin superfamily
  ROBO family
   118391368
SSDB
Motif
Pfam: I-set Ig_3 ig Ig_2 fn3 V-set C2-set_2 Ig_DSCAM-DSCAML_C Pur_ac_phosph_N Ig_J_second
Other DBs
NCBI-GeneID: 118391368
NCBI-ProteinID: XP_052313971
LinkDB
Position
12:31825452..32012859
AA seq 1611 aa
MMPAHSVGIYFLLGFIHICSGSRLRQDDSPPRIVEHPSDLIVSKGEPATLNCKAEGRPAP
TVEWYKDGERVETDRDNPRSHRMLLPSGSLFFLRIVHGRRSKPDDGSYVCVARNYLGQAI
SHNASLEVAILRDDFRQNPADVMVAAGEPAVLECQPPRGHPEPTISWRKDGTNINDRDER
ITIRSGKLMITNARKSDAGKYICVGTNMVGERESETAELTVLERPGFVKRPSSVMVLADE
SVEFHCEAQGDPVPTVRWRKEDADLPKGRYEILEDHTLSVRDVRLSDEGSYTCVVENMVG
KAEASATLTVHVPPAFAMRPRNQVVAVGRTITFQCEATGNPQPAIFWQREGSNSLLFSYQ
PPQPFSRLSVSQTGSLTIADAQRSDAGYYSCQALNIAGSVITKALLEVTDMVSDRPPPVI
RQGPSNHTVPVESTVVLGCQATGTPTPTVHWKKDGVMVSPEEARITQIDTGALQIRYTKL
GDTGVYTCVASSPSGEASWRAYLEVEEFGVVVQPGRPTDPNLIPSGPSKPDVTDVSRTSV
TLSWKSNPNAGATPTSYVIEAFSHASGSSWVTLADHVKMETFVLKNLKPGAVYLFLVRAA
NAYGLSDPSPITDAVRTQDTPPTSQGVDHRQIQRELGDVVIHLHNPTILSSSSVRVQWTV
EQQSPYIQGYKVMYRASAELGQPGGQWGVFEVRNPGEDGAVVPQLKKGVTYEFKVRPFFD
EFQGADSEVKVARTPEEAPSGAPRGVTITKSDANGTAILVAWQPPPEDEQNGMVQEYKIW
CLGNESRYHVNRTVDGSTFSVLIPSLAPGIRYSVEVAASNGAGPGVKSDVTFFQLDSTGQ
MMDSREDQDTLSQISDVVKQPAFIAGIGATCWVVLMVFSVWLYRHHKKRSGLSSSYAGIR
KVPSFTFTPTVNYQRGGESVCSAGRPGLLNMGESVNQPWLPDSWPNACANHKDCSINCCN
TGNGTSDSNMTTYSRPADCIANYGSQLENQQGGLLGSEQAVYSDVDLSNKLNELKTFNNP
SLCYMGPGAGPPTPYEPTPYATTQLIQSSILNKAGAAGAADIRCWNQPPSQLQKAHMQYN
IMEQSNRLNKDHYRGDGPLQGTVPYNQAHEHNTGGSLHSSDKGSNSTSGSQSHKKGTRTP
KLPKTNTVTRGEPLPPSPANPPPSRSCDEYTLPMEKSFNPDALCPMLPSTMYLHPDEMEE
EVAEEGMDRCPTPPVRGAASSPEGLSYSHQSTATLTPSPQGDQHNGLHNGTDHHRQHVGS
PPPSPLPLSPPHTYGYISSPLELDTDGQEEEGEEDEEEAGDEMNADMAQSHYHQHQNNHQ
PHQQLRLNQHPRSPRRLHLRGLEQTPASSTGDLESSVTGSMINGWGSASEDDNGSSGRSS
AVSSSDGSFFTDADFAQAVANTGDYTAGLRMARFPEDTGPAGRRHQRPSSPLSTDSNMSS
AVMQKRPPKRHKQHQAQVGHQGHLKRNDFTDDSCMPLKSPSHMSRCGYEVRGATLPRIGS
GEGRGRRGSAGGQKTREGSVERREGQDKNRTPQGGKGSSKARQPPGSEDIPPYSRPSFPS
VQSQAQSSSSSMSSRGSGGRRRDGARRNPTDTLPSITGFQTQEEELELLES
NT seq 4836 nt   +upstreamnt  +downstreamnt
atgatgcctgcgcattctgtgggtatttactttctactcggattcattcacatttgttca
ggatctcgtctgcgtcaggatgactcccctcctcggatcgtggagcacccctctgacctc
atcgtgtccaagggggagccggccaccctcaactgcaaggcggaggggcgtcccgccccc
acggtggagtggtacaaggacggggagcgggtggagacagaccgggacaacccccgttcc
caccgcatgctgctgcccagcggctccctcttcttcctgcgcatcgtccatggccgacgc
agcaagccagacgacggcagctacgtgtgtgtggcccgtaactacctgggccaggccatt
agccacaacgcctcactggaagtagccatactgcgtgatgactttagacagaacccagcg
gatgtgatggtggcggcgggggaacctgccgtactggagtgccaacccccccgtgggcat
cctgagcccaccatctcatggaggaaagacggtaccaacatcaatgacagggatgagcgc
atcacgatccgcagtgggaagctgatgatcaccaacgccaggaagagtgacgcagggaaa
tacatttgtgtggggaccaatatggtgggagagagggagagcgagactgcagaactgact
gttctagagcgcccagggtttgtgaagaggcccagtagtgttatggtgctggcagatgag
agtgtggagttccactgtgaggcacagggagatccggtccccactgtccgctggaggaaa
gaggatgcagacctacccaaggggaggtatgagatcctagaggaccacaccctgagcgta
cgagatgtaagactgtcagacgagggctcctacacatgtgttgtggagaacatggtggga
aaggctgaggcatccgctacactgactgtacacgtgcccccagcgttcgccatgcgcccc
agaaaccaggtggtggcggtggggagaacgatcaccttccagtgtgaggccactggcaac
ccccaacctgctatcttctggcagagggagggcagcaatagcctgctattctcctaccag
ccccctcagcccttcagccgtctctctgtgtcccagactggcagtctgaccatcgcagat
gcccagcgctctgacgccgggtactacagctgtcaggccctcaacatcgctggctccgtc
atcaccaaggccctgctggaggtcactgacatggtgtcggaccgcccccctcccgtgatc
cgacagggcccgtccaatcatacggtacctgtggagagcacagtggtcctgggttgccaa
gcaacagggacacccacaccaacagttcactggaagaaagacggggtgatggtgtccccc
gaggaggcccgcatcacccagatagacacaggagccctgcagatccgctacactaagctt
ggagatacaggcgtctacacatgcgtggcgtccagccccagtggagaggcatcctggagg
gcttacctggaggtggaagagttcggagtagtagtccagccaggtcgacccacagaccct
aacctgatccccagcggcccatccaagcctgacgtgactgacgtgagccgcacctcagtc
actctgtcctggaaatccaacccaaatgctggggccacgcccacctcctatgtcatcgaa
gcattcagtcacgcgtcggggagtagctgggtgactctggctgaccacgtgaagatggag
acctttgtcctgaagaacctcaagccaggtgcagtttacctgtttctggtgagagcagcc
aacgcctacggcctcagtgaccccagccccatcactgatgcagtcaggacacaagacacc
cctcccaccagccagggggtagaccatcgtcagatccagagggagctgggggatgtggtg
atccatctccacaaccccaccatcctctcttcctcttctgtcagggtgcagtggacggtg
gagcagcagtctccatacatccagggttacaaggtgatgtacagggcgtctgcagagctg
ggccagccgggggggcagtggggcgtgttcgaggtgcggaaccctggagaggacggtgct
gtggtgcctcagctgaagaagggggtcacctacgagttcaaagtgcgtcccttctttgat
gagttccagggagcggacagcgaagtgaaggtggccaggacgcctgaggaagctcccagt
ggagccccccgaggtgttaccatcacgaagagtgatgccaatgggaccgccatcctggtc
gcttggcaaccgcctcctgaggatgaacagaatggaatggtacaggagtacaagatctgg
tgcctgggcaatgagagccgttaccacgtcaaccggacagtagatggctccaccttctcc
gtgctaatccccagcctggcgccagggatacgctacagtgtggaggtcgccgctagcaac
ggtgctggcccaggggtcaagagtgatgtcaccttctttcaacttgactctacaggtcag
atgatggacagtcgtgaggaccaggacacattgtctcagatctcagacgtggtcaaacag
ccggcgttcatcgcgggcatcggtgctacctgctgggtggtcctcatggtgttcagtgtg
tggctctaccgccaccacaaaaagaggagtggcctcagcagcagctacgccggcatacgc
aaagttccatctttcaccttcactcctacagtgaactatcagagaggaggagagtcggtc
tgcagtgctgggagacccgggctgctgaacatgggtgagagtgtgaaccagccgtggctg
ccagactcctggcccaacgcctgtgccaaccacaaagactgcagcatcaactgctgcaac
actggaaacggcaccagcgacagcaacatgaccacctacagccgcccagctgactgcatc
gccaactatggcagccagttggagaaccagcaggggggtctattggggtctgaacaggcc
gtgtacagcgacgtggacctctccaacaaactcaatgagctcaagaccttcaacaacccc
agcctgtgctacatgggcccaggggcagggccgcccaccccctatgagcccaccccctac
gccaccacccagctcatccagtctagcatccttaacaaggctggagctgcaggggccgct
gatatacgctgttggaaccagcccccgtcccagctgcagaaagcacatatgcagtacaac
atcatggagcagagcaacaggctcaataaagaccactatagaggagatgggcctctgcaa
ggcaccgtcccgtacaaccaggcccatgaacacaacacaggaggctccctccacagctct
gacaagggcagcaacagcacctctgggagccaaagtcataagaagggaactcgcaccccc
aaactgcccaaaacgaacacagtgacccggggtgaacctctgcccccttcccctgccaac
ccaccaccaagccggagctgtgacgaatataccctgcccatggaaaaaagctttaaccca
gatgccctatgcccaatgcttccctcaacgatgtacctgcatccagatgagatggaggag
gaggtggcggaggaggggatggatagatgtcccaccccccctgtcagaggggcagcctca
tcccctgagggtctgtcctacagtcaccagtctacggcaactctcaccccctccccccag
ggagaccagcacaacggcctacacaatggaacagaccaccacagacaacacgtgggcagc
ccccctccttccccgctccccctctcccccccacacacctacggctacatctccagcccc
ctggaactggatactgatggccaggaggaagagggggaggaggatgaagaagaggcaggg
gatgagatgaatgcagacatggcccagagtcactaccaccagcaccaaaataaccaccag
ccccaccagcaactgcgcctcaaccagcacccccgttccccacgcaggctgcacctccgg
gggctagagcagacgccggcctccagcacgggggatctggagagttccgtgacgggctcc
atgattaacggctggggctcggcctcagaggatgacaacggctcatcaggacgctccagc
gccgtcagctcctcagacggatccttcttcacagacgcagacttcgcccaggctgtggcc
aacactggagactacacagcaggcctacgcatggccaggttcccggaggacacaggacca
gcaggacgaaggcaccagcgacccagcagcccactgtccacagacagcaacatgagctct
gcagtgatgcagaagagaccgcccaagaggcacaagcagcaccaggcccaggttggccac
caaggtcacctgaagaggaacgacttcacagacgactcatgcatgcccttgaagtcccct
agtcacatgtcgcggtgtggctatgaggtgagaggtgctacgctcccgaggattggctct
ggggagggtcggggccggagagggagtgcaggaggccagaagaccagagagggctctgta
gagagacgggagggccaggacaagaacaggactccacagggaggcaaggggagcagcaaa
gcccgtcagccaccaggttctgaggacatccccccgtacagcaggccctccttcccctcg
gtgcagagccaggctcagagctcctccagctccatgtcctcccggggctcagggggaagg
aggagagatggggcccgcaggaaccccacagacacactgcccagcatcacaggcttccag
acccaggaagaggagctagagcttctggagagctga

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