Oncorhynchus keta (chum salmon): 118391368
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Entry
118391368 CDS
T09424
Name
(RefSeq) roundabout homolog 1-like
KO
K06753
roundabout, axon guidance receptor 1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118391368
Cell adhesion molecules [BR:
oke04515
]
Immunoglobulin superfamily
ROBO family
118391368
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
118391368
NCBI-ProteinID:
XP_052313971
LinkDB
All DBs
Position
12:31825452..32012859
Genome browser
AA seq
1611 aa
AA seq
DB search
MMPAHSVGIYFLLGFIHICSGSRLRQDDSPPRIVEHPSDLIVSKGEPATLNCKAEGRPAP
TVEWYKDGERVETDRDNPRSHRMLLPSGSLFFLRIVHGRRSKPDDGSYVCVARNYLGQAI
SHNASLEVAILRDDFRQNPADVMVAAGEPAVLECQPPRGHPEPTISWRKDGTNINDRDER
ITIRSGKLMITNARKSDAGKYICVGTNMVGERESETAELTVLERPGFVKRPSSVMVLADE
SVEFHCEAQGDPVPTVRWRKEDADLPKGRYEILEDHTLSVRDVRLSDEGSYTCVVENMVG
KAEASATLTVHVPPAFAMRPRNQVVAVGRTITFQCEATGNPQPAIFWQREGSNSLLFSYQ
PPQPFSRLSVSQTGSLTIADAQRSDAGYYSCQALNIAGSVITKALLEVTDMVSDRPPPVI
RQGPSNHTVPVESTVVLGCQATGTPTPTVHWKKDGVMVSPEEARITQIDTGALQIRYTKL
GDTGVYTCVASSPSGEASWRAYLEVEEFGVVVQPGRPTDPNLIPSGPSKPDVTDVSRTSV
TLSWKSNPNAGATPTSYVIEAFSHASGSSWVTLADHVKMETFVLKNLKPGAVYLFLVRAA
NAYGLSDPSPITDAVRTQDTPPTSQGVDHRQIQRELGDVVIHLHNPTILSSSSVRVQWTV
EQQSPYIQGYKVMYRASAELGQPGGQWGVFEVRNPGEDGAVVPQLKKGVTYEFKVRPFFD
EFQGADSEVKVARTPEEAPSGAPRGVTITKSDANGTAILVAWQPPPEDEQNGMVQEYKIW
CLGNESRYHVNRTVDGSTFSVLIPSLAPGIRYSVEVAASNGAGPGVKSDVTFFQLDSTGQ
MMDSREDQDTLSQISDVVKQPAFIAGIGATCWVVLMVFSVWLYRHHKKRSGLSSSYAGIR
KVPSFTFTPTVNYQRGGESVCSAGRPGLLNMGESVNQPWLPDSWPNACANHKDCSINCCN
TGNGTSDSNMTTYSRPADCIANYGSQLENQQGGLLGSEQAVYSDVDLSNKLNELKTFNNP
SLCYMGPGAGPPTPYEPTPYATTQLIQSSILNKAGAAGAADIRCWNQPPSQLQKAHMQYN
IMEQSNRLNKDHYRGDGPLQGTVPYNQAHEHNTGGSLHSSDKGSNSTSGSQSHKKGTRTP
KLPKTNTVTRGEPLPPSPANPPPSRSCDEYTLPMEKSFNPDALCPMLPSTMYLHPDEMEE
EVAEEGMDRCPTPPVRGAASSPEGLSYSHQSTATLTPSPQGDQHNGLHNGTDHHRQHVGS
PPPSPLPLSPPHTYGYISSPLELDTDGQEEEGEEDEEEAGDEMNADMAQSHYHQHQNNHQ
PHQQLRLNQHPRSPRRLHLRGLEQTPASSTGDLESSVTGSMINGWGSASEDDNGSSGRSS
AVSSSDGSFFTDADFAQAVANTGDYTAGLRMARFPEDTGPAGRRHQRPSSPLSTDSNMSS
AVMQKRPPKRHKQHQAQVGHQGHLKRNDFTDDSCMPLKSPSHMSRCGYEVRGATLPRIGS
GEGRGRRGSAGGQKTREGSVERREGQDKNRTPQGGKGSSKARQPPGSEDIPPYSRPSFPS
VQSQAQSSSSSMSSRGSGGRRRDGARRNPTDTLPSITGFQTQEEELELLES
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctgcgcattctgtgggtatttactttctactcggattcattcacatttgttca
ggatctcgtctgcgtcaggatgactcccctcctcggatcgtggagcacccctctgacctc
atcgtgtccaagggggagccggccaccctcaactgcaaggcggaggggcgtcccgccccc
acggtggagtggtacaaggacggggagcgggtggagacagaccgggacaacccccgttcc
caccgcatgctgctgcccagcggctccctcttcttcctgcgcatcgtccatggccgacgc
agcaagccagacgacggcagctacgtgtgtgtggcccgtaactacctgggccaggccatt
agccacaacgcctcactggaagtagccatactgcgtgatgactttagacagaacccagcg
gatgtgatggtggcggcgggggaacctgccgtactggagtgccaacccccccgtgggcat
cctgagcccaccatctcatggaggaaagacggtaccaacatcaatgacagggatgagcgc
atcacgatccgcagtgggaagctgatgatcaccaacgccaggaagagtgacgcagggaaa
tacatttgtgtggggaccaatatggtgggagagagggagagcgagactgcagaactgact
gttctagagcgcccagggtttgtgaagaggcccagtagtgttatggtgctggcagatgag
agtgtggagttccactgtgaggcacagggagatccggtccccactgtccgctggaggaaa
gaggatgcagacctacccaaggggaggtatgagatcctagaggaccacaccctgagcgta
cgagatgtaagactgtcagacgagggctcctacacatgtgttgtggagaacatggtggga
aaggctgaggcatccgctacactgactgtacacgtgcccccagcgttcgccatgcgcccc
agaaaccaggtggtggcggtggggagaacgatcaccttccagtgtgaggccactggcaac
ccccaacctgctatcttctggcagagggagggcagcaatagcctgctattctcctaccag
ccccctcagcccttcagccgtctctctgtgtcccagactggcagtctgaccatcgcagat
gcccagcgctctgacgccgggtactacagctgtcaggccctcaacatcgctggctccgtc
atcaccaaggccctgctggaggtcactgacatggtgtcggaccgcccccctcccgtgatc
cgacagggcccgtccaatcatacggtacctgtggagagcacagtggtcctgggttgccaa
gcaacagggacacccacaccaacagttcactggaagaaagacggggtgatggtgtccccc
gaggaggcccgcatcacccagatagacacaggagccctgcagatccgctacactaagctt
ggagatacaggcgtctacacatgcgtggcgtccagccccagtggagaggcatcctggagg
gcttacctggaggtggaagagttcggagtagtagtccagccaggtcgacccacagaccct
aacctgatccccagcggcccatccaagcctgacgtgactgacgtgagccgcacctcagtc
actctgtcctggaaatccaacccaaatgctggggccacgcccacctcctatgtcatcgaa
gcattcagtcacgcgtcggggagtagctgggtgactctggctgaccacgtgaagatggag
acctttgtcctgaagaacctcaagccaggtgcagtttacctgtttctggtgagagcagcc
aacgcctacggcctcagtgaccccagccccatcactgatgcagtcaggacacaagacacc
cctcccaccagccagggggtagaccatcgtcagatccagagggagctgggggatgtggtg
atccatctccacaaccccaccatcctctcttcctcttctgtcagggtgcagtggacggtg
gagcagcagtctccatacatccagggttacaaggtgatgtacagggcgtctgcagagctg
ggccagccgggggggcagtggggcgtgttcgaggtgcggaaccctggagaggacggtgct
gtggtgcctcagctgaagaagggggtcacctacgagttcaaagtgcgtcccttctttgat
gagttccagggagcggacagcgaagtgaaggtggccaggacgcctgaggaagctcccagt
ggagccccccgaggtgttaccatcacgaagagtgatgccaatgggaccgccatcctggtc
gcttggcaaccgcctcctgaggatgaacagaatggaatggtacaggagtacaagatctgg
tgcctgggcaatgagagccgttaccacgtcaaccggacagtagatggctccaccttctcc
gtgctaatccccagcctggcgccagggatacgctacagtgtggaggtcgccgctagcaac
ggtgctggcccaggggtcaagagtgatgtcaccttctttcaacttgactctacaggtcag
atgatggacagtcgtgaggaccaggacacattgtctcagatctcagacgtggtcaaacag
ccggcgttcatcgcgggcatcggtgctacctgctgggtggtcctcatggtgttcagtgtg
tggctctaccgccaccacaaaaagaggagtggcctcagcagcagctacgccggcatacgc
aaagttccatctttcaccttcactcctacagtgaactatcagagaggaggagagtcggtc
tgcagtgctgggagacccgggctgctgaacatgggtgagagtgtgaaccagccgtggctg
ccagactcctggcccaacgcctgtgccaaccacaaagactgcagcatcaactgctgcaac
actggaaacggcaccagcgacagcaacatgaccacctacagccgcccagctgactgcatc
gccaactatggcagccagttggagaaccagcaggggggtctattggggtctgaacaggcc
gtgtacagcgacgtggacctctccaacaaactcaatgagctcaagaccttcaacaacccc
agcctgtgctacatgggcccaggggcagggccgcccaccccctatgagcccaccccctac
gccaccacccagctcatccagtctagcatccttaacaaggctggagctgcaggggccgct
gatatacgctgttggaaccagcccccgtcccagctgcagaaagcacatatgcagtacaac
atcatggagcagagcaacaggctcaataaagaccactatagaggagatgggcctctgcaa
ggcaccgtcccgtacaaccaggcccatgaacacaacacaggaggctccctccacagctct
gacaagggcagcaacagcacctctgggagccaaagtcataagaagggaactcgcaccccc
aaactgcccaaaacgaacacagtgacccggggtgaacctctgcccccttcccctgccaac
ccaccaccaagccggagctgtgacgaatataccctgcccatggaaaaaagctttaaccca
gatgccctatgcccaatgcttccctcaacgatgtacctgcatccagatgagatggaggag
gaggtggcggaggaggggatggatagatgtcccaccccccctgtcagaggggcagcctca
tcccctgagggtctgtcctacagtcaccagtctacggcaactctcaccccctccccccag
ggagaccagcacaacggcctacacaatggaacagaccaccacagacaacacgtgggcagc
ccccctccttccccgctccccctctcccccccacacacctacggctacatctccagcccc
ctggaactggatactgatggccaggaggaagagggggaggaggatgaagaagaggcaggg
gatgagatgaatgcagacatggcccagagtcactaccaccagcaccaaaataaccaccag
ccccaccagcaactgcgcctcaaccagcacccccgttccccacgcaggctgcacctccgg
gggctagagcagacgccggcctccagcacgggggatctggagagttccgtgacgggctcc
atgattaacggctggggctcggcctcagaggatgacaacggctcatcaggacgctccagc
gccgtcagctcctcagacggatccttcttcacagacgcagacttcgcccaggctgtggcc
aacactggagactacacagcaggcctacgcatggccaggttcccggaggacacaggacca
gcaggacgaaggcaccagcgacccagcagcccactgtccacagacagcaacatgagctct
gcagtgatgcagaagagaccgcccaagaggcacaagcagcaccaggcccaggttggccac
caaggtcacctgaagaggaacgacttcacagacgactcatgcatgcccttgaagtcccct
agtcacatgtcgcggtgtggctatgaggtgagaggtgctacgctcccgaggattggctct
ggggagggtcggggccggagagggagtgcaggaggccagaagaccagagagggctctgta
gagagacgggagggccaggacaagaacaggactccacagggaggcaaggggagcagcaaa
gcccgtcagccaccaggttctgaggacatccccccgtacagcaggccctccttcccctcg
gtgcagagccaggctcagagctcctccagctccatgtcctcccggggctcagggggaagg
aggagagatggggcccgcaggaaccccacagacacactgcccagcatcacaggcttccag
acccaggaagaggagctagagcttctggagagctga
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integrated database retrieval system